Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2314 Fragaria x ananassa HOM05D027463 ORTHO05D206097 8.9e-54 213.4 111 100.0
FAN03G3401 Fragaria x ananassa HOM05D027463 ORTHO05D204185 1.1e-32 143.3 82 92.7
FvH4_2g02220 Fragaria vesca HOM05D027463 ORTHO05D035425 1.6e-26 122.9 78 83.3
FAN24G2421 Fragaria x ananassa HOM05D000203 ORTHO05D035425 7.4e-24 114.0 69 87.0
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 8.8e-09 63.9 48 68.8
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 1.1e-08 63.5 48 68.8
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.1e-08 63.5 48 68.8
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 7.4e-08 60.8 48 64.6
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 7.4e-08 60.8 48 64.6
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.3e-07 60.1 48 62.5
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.3e-07 60.1 48 62.5
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 2.2e-07 59.3 48 62.5
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 2.8e-07 58.9 48 64.6
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 3.7e-07 58.5 48 60.4
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 3.7e-07 58.5 50 60.0
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 4.8e-07 58.2 48 62.5
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 4.8e-07 58.2 48 62.5
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 4.8e-07 58.2 48 62.5
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 4.8e-07 58.2 48 62.5
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 4.8e-07 58.2 48 64.6
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 4.8e-07 58.2 48 60.4
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 6.3e-07 57.8 45 64.4
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 8.2e-07 57.4 48 62.5
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 1.1e-06 57.0 48 58.3
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 1.1e-06 57.0 48 60.4
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 1.4e-06 56.6 48 60.4
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 2.4e-06 55.8 50 54.0
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 2.4e-06 55.8 50 54.0
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 2.4e-06 55.8 48 58.3
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 2.4e-06 55.8 48 60.4
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 3.1e-06 55.5 48 60.4
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 3.1e-06 55.5 48 60.4
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 4.1e-06 55.1 48 58.3
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 4.1e-06 55.1 48 58.3
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 4.1e-06 55.1 48 58.3
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 5.3e-06 54.7 48 56.2
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 5.3e-06 54.7 50 52.0
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 5.3e-06 54.7 50 52.0
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 6.9e-06 54.3 48 58.3
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 6.9e-06 54.3 48 58.3
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 6.9e-06 54.3 48 58.3
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 6.9e-06 54.3 50 52.0
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 9.1e-06 53.9 50 52.0
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 9.1e-06 53.9 48 58.3
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 9.1e-06 53.9 48 54.2
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 9.1e-06 53.9 65 47.7
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 9.1e-06 53.9 50 52.0
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 9.1e-06 53.9 48 58.3


User provided reference genes

Program Settings