Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2152 Fragaria x ananassa HOM05D000071 ORTHO05D000029 6.7e-57 224.2 148 100.0
FAN02G4221 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.8e-26 122.5 224 43.8
RcHm_v2.0_Chr2g0175371 Rosa chinensis HOM05D000071 ORTHO05D000029 1.1e-25 120.6 224 40.2
FvH4_6g53230 Fragaria vesca HOM05D000071 ORTHO05D000029 3.3e-19 99.0 224 42.0
Prupe.3G304400 Prunus persica HOM05D000071 ORTHO05D000029 2.3e-17 92.8 225 38.2
Prupe.7G032500 Prunus persica HOM05D000071 ORTHO05D000029 2.6e-16 89.4 225 37.8
FAN09G0079 Fragaria x ananassa HOM05D000071 ORTHO05D007791 3.4e-16 89.0 206 38.8
MD17G1013200 Malus domestica HOM05D000071 ORTHO05D000029 5.8e-16 88.2 225 46.2
MD17G1013300 Malus domestica HOM05D000071 ORTHO05D000029 5.8e-16 88.2 225 35.6
MD17G1013400 Malus domestica HOM05D000071 ORTHO05D000029 1.3e-15 87.0 225 40.9
FAN25G1354 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.1e-13 79.7 58 69.0
RcHm_v2.0_Chr2g0143001 Rosa chinensis HOM05D000071 ORTHO05D000029 1.5e-11 73.6 81 50.6
RcHm_v2.0_Chr2g0175321 Rosa chinensis HOM05D000071 ORTHO05D000029 1.9e-11 73.2 81 50.6
Prupe.7G040200 Prunus persica HOM05D000071 ORTHO05D000029 4.3e-11 72.0 220 33.6
CANSAT64G2047 Cannabis sativa HOM05D000071 ORTHO05D000029 7.3e-11 71.2 80 50.0
COL.COLO4_17185 Corchorus olitorius HOM05D000071 ORTHO05D000029 7.3e-11 71.2 81 45.7
Dinv25664 Davidia involucrata HOM05D000071 ORTHO05D000029 3.6e-10 68.9 81 48.1
FAN05G5632 Fragaria x ananassa HOM05D000071 ORTHO05D000029 3.6e-10 68.9 81 45.7
Ciclev10029913m.g Citrus clementina HOM05D000071 ORTHO05D000029 6.2e-10 68.2 47 63.8
Duzib147G0888 Durio zibethinus HOM05D000071 ORTHO05D000029 8.1e-10 67.8 81 45.7
Prupe.7G033300 Prunus persica HOM05D000071 ORTHO05D000029 8.1e-10 67.8 79 49.4
Cpa.g.sc701.4 Carica papaya HOM05D000071 ORTHO05D000029 1.1e-09 67.4 81 43.2
RcHm_v2.0_Chr2g0143061 Rosa chinensis HOM05D000071 ORTHO05D000029 1.8e-09 66.6 79 46.8
RcHm_v2.0_Chr2g0142981 Rosa chinensis HOM05D000071 ORTHO05D000029 3.1e-09 65.9 82 47.6
RcHm_v2.0_Chr2g0143091 Rosa chinensis HOM05D000071 ORTHO05D000029 3.1e-09 65.9 82 47.6
Hma1.2p1_1278F.1_g272380 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 4.0e-09 65.5 112 36.6
Prupe.7G032900 Prunus persica HOM05D000071 ORTHO05D000029 4.0e-09 65.5 79 45.6
GSVIVG01001803001 Vitis vinifera HOM05D000071 ORTHO05D000029 5.2e-09 65.1 49 59.2
GSVIVG01001804001 Vitis vinifera HOM05D000071 ORTHO05D000029 5.2e-09 65.1 49 59.2
Prupe.7G033000 Prunus persica HOM05D000071 ORTHO05D000029 8.9e-09 64.3 79 45.6
Prupe.7G033100 Prunus persica HOM05D000071 ORTHO05D000029 8.9e-09 64.3 79 45.6
CSS0009714 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 2.6e-08 62.8 81 45.7
CSS0042351 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 2.6e-08 62.8 82 45.1
Ciclev10017744m.g Citrus clementina HOM05D000071 ORTHO05D000029 2.6e-08 62.8 50 54.0
Dinv33349 Davidia involucrata HOM05D000071 ORTHO05D000029 3.4e-08 62.4 47 59.6
Atru.chr6.2539 Acer truncatum HOM05D000071 ORTHO05D000029 4.4e-08 62.0 81 42.0
Atru.chr6.2544 Acer truncatum HOM05D000071 ORTHO05D000029 4.4e-08 62.0 80 45.0
CSS0033806 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 4.4e-08 62.0 81 45.7
TWI56G0711 Tripterygium wilfordii HOM05D000071 ORTHO05D000029 5.8e-08 61.6 48 56.2
TWI12G1219 Tripterygium wilfordii HOM05D000071 ORTHO05D000029 9.9e-08 60.8 81 44.4
Ciclev10017561m.g Citrus clementina HOM05D000071 ORTHO05D000029 2.2e-07 59.7 45 60.0
Cc04_g07960 Coffea canephora HOM05D000071 ORTHO05D000029 2.2e-07 59.7 81 43.2
Dinv06120 Davidia involucrata HOM05D000071 ORTHO05D000029 2.2e-07 59.7 49 55.1
Migut.K01457 Erythranthe guttata HOM05D000071 ORTHO05D000029 2.2e-07 59.7 81 42.0
Atru.chr6.2540 Acer truncatum HOM05D000071 ORTHO05D000029 2.9e-07 59.3 81 44.4
Duzib235G0862 Durio zibethinus HOM05D000071 ORTHO05D000029 2.9e-07 59.3 63 46.0
Ciclev10018220m.g Citrus clementina HOM05D000071 ORTHO05D000029 1.1e-06 57.4 48 54.2
TAR266G0003 Trochodendron aralioides HOM05D000071 ORTHO05D000029 1.1e-06 57.4 84 41.7
Cpa.g.sc171.28 Carica papaya HOM05D000071 ORTHO05D000029 1.4e-06 57.0 81 38.3
Hma1.2p1_1278F.1_g272390 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 1.4e-06 57.0 81 40.7
Oeu049764.4 Olea europaea HOM05D000071 ORTHO05D000029 1.4e-06 57.0 81 40.7
Oeu013643.1 Olea europaea HOM05D000071 ORTHO05D000029 1.9e-06 56.6 48 54.2
TAR636G0907 Trochodendron aralioides HOM05D000071 ORTHO05D000029 3.2e-06 55.8 82 40.2
Cc07_g16440 Coffea canephora HOM05D000071 ORTHO05D000029 5.4e-06 55.1 144 29.2
RcHm_v2.0_Chr2g0175361 Rosa chinensis HOM05D000071 ORTHO05D000029 9.2e-06 54.3 148 43.2


User provided reference genes

Program Settings