Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2059 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.7e-90 335.9 158 100.0
FAN25G2817 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.5e-83 312.8 151 98.0
FvH4_3g38250 Fragaria vesca HOM05D005325 ORTHO05D008457 3.4e-83 311.6 151 97.4
FAN11G0298 Fragaria x ananassa HOM05D005325 ORTHO05D008457 3.8e-82 308.1 151 96.7
RcHm_v2.0_Chr5g0068731 Rosa chinensis HOM05D005325 ORTHO05D008457 8.2e-77 290.4 151 90.1
Prupe.6G060500 Prunus persica HOM05D005325 ORTHO05D008457 5.5e-73 277.7 151 84.1
MD11G1079900 Malus domestica HOM05D005325 ORTHO05D008457 1.1e-70 270.0 152 82.9
FAN16G2295 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.3e-66 256.5 122 97.5
Cfa011661 Carpinus fangiana HOM05D005325 ORTHO05D008457 2.2e-66 255.8 151 78.1
Haze_24265 Corylus avellana HOM05D005325 ORTHO05D008457 1.2e-64 250.0 151 75.5
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 1.2e-64 250.0 151 72.8
Glyma.02G225500 Glycine max HOM05D005325 ORTHO05D008457 2.7e-64 248.8 151 74.2
Dinv28619 Davidia involucrata HOM05D005325 ORTHO05D008457 6.1e-64 247.7 151 72.2
Ciclev10029368m.g Citrus clementina HOM05D005325 ORTHO05D008457 1.4e-63 246.5 151 76.2
COL.COLO4_19112 Corchorus olitorius HOM05D005325 ORTHO05D008457 1.8e-63 246.1 151 74.8
Ca_05587_v3 Cicer arietinum L. HOM05D005325 ORTHO05D008457 6.7e-63 244.2 151 72.2
GSVIVG01024786001 Vitis vinifera HOM05D005325 ORTHO05D008457 6.7e-63 244.2 148 71.6
Carub.0004s1073 Capsella rubella HOM05D005325 ORTHO05D008457 1.1e-62 243.4 148 74.3
LjContig00155g0003403 Lotus japonicus HOM05D005325 ORTHO05D008457 1.5e-62 243.0 146 74.0
Nn2g11401 Nelumbo nucifera HOM05D005325 ORTHO05D008457 1.5e-62 243.0 148 72.3
Psat2g059320 Pisum sativum HOM05D005325 ORTHO05D008457 2.0e-62 242.7 150 70.7
MELO3C025867.2 Cucumis melo HOM05D005325 ORTHO05D008457 2.6e-62 242.3 145 75.9
Gohir.D05G090700 Gossypium hirsutum HOM05D005325 ORTHO05D008457 2.6e-62 242.3 151 73.5
Thecc.09G305000 Theobroma cacao HOM05D005325 ORTHO05D008457 2.6e-62 242.3 151 72.8
Gorai.009G093200 Gossypium raimondii HOM05D005325 ORTHO05D008457 5.7e-62 241.1 151 72.8
CAN.G700.24 Capsicum annuum HOM05D005325 ORTHO05D008457 7.4e-62 240.7 151 69.5
Sed0000838 Sechium edule HOM05D005325 ORTHO05D008457 1.3e-61 240.0 153 73.2
Thhalv10017013m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 1.7e-61 239.6 148 73.6
QL01p037417 Quercus lobata HOM05D005325 ORTHO05D008457 1.7e-61 239.6 151 72.8
CiPaw.13G080600 Carya illinoinensis HOM05D005325 ORTHO05D008457 2.2e-61 239.2 149 71.1
Potri.001G249400 Populus trichocarpa HOM05D005325 ORTHO05D008457 2.8e-61 238.8 143 73.4
CARHR122960 Cardamine hirsuta HOM05D005325 ORTHO05D008457 6.3e-61 237.7 144 73.6
Gohir.A05G089800 Gossypium hirsutum HOM05D005325 ORTHO05D008457 6.3e-61 237.7 151 72.2
Medtr5g069880 Medicago truncatula HOM05D005325 ORTHO05D008457 8.2e-61 237.3 151 68.2
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 1.1e-60 236.9 151 70.9
Sabra16G0151500 Salix brachista HOM05D005325 ORTHO05D008457 1.4e-60 236.5 143 72.7
TWI31G1198 Tripterygium wilfordii HOM05D005325 ORTHO05D008457 1.4e-60 236.5 143 72.0
Actinidia25148 Actinidia chinensis HOM05D005325 ORTHO05D008457 1.8e-60 236.1 144 71.5
AT2G29640 Arabidopsis thaliana HOM05D005325 ORTHO05D008457 3.1e-60 235.3 148 70.9
MSTRG.18491 Avicennia marina HOM05D005325 ORTHO05D008457 3.1e-60 235.3 150 68.7
Cc01_g13970 Coffea canephora HOM05D005325 ORTHO05D008457 4.1e-60 235.0 141 73.0
PGR119G0476 Punica granatum HOM05D005325 ORTHO05D008457 5.3e-60 234.6 149 71.1
Hund04885 Selenicereus undatus HOM05D005325 ORTHO05D008457 5.3e-60 234.6 144 70.8
PGSC0003DMG400020866 Solanum tuberosum HOM05D005325 ORTHO05D008457 5.3e-60 234.6 151 68.2
Duzib170G0996 Durio zibethinus HOM05D005325 ORTHO05D008457 7.0e-60 234.2 149 71.1
Rhsim13G0071900 Rhododendron simsii HOM05D005325 ORTHO05D008457 7.0e-60 234.2 147 69.4
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 9.1e-60 233.8 144 70.8
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 9.1e-60 233.8 144 70.8
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 9.1e-60 233.8 149 69.8
Sp4g12350 Schrenkiella parvula HOM05D005325 ORTHO05D008457 9.1e-60 233.8 147 71.4
AL4G24390 Arabidopsis lyrata HOM05D005325 ORTHO05D008457 1.2e-59 233.4 143 74.1
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 1.6e-59 233.0 154 70.1
Phvul.008G262400 Phaseolus vulgaris HOM05D005325 ORTHO05D008457 1.6e-59 233.0 146 71.9
TPR.G24020 Trifolium pratense HOM05D005325 ORTHO05D008457 1.6e-59 233.0 147 70.1
BolC4t23643H Brassica oleracea HOM05D005325 ORTHO05D008457 2.0e-59 232.6 147 72.8
CsaV3_6G016370 Cucumis sativus L. HOM05D005325 ORTHO05D008457 2.0e-59 232.6 143 74.1
Lalb_Chr04g0252301 Lupinus albus HOM05D005325 ORTHO05D008457 2.0e-59 232.6 145 70.3
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 2.6e-59 232.3 153 70.6
Oeu019913.1 Olea europaea HOM05D005325 ORTHO05D008457 2.6e-59 232.3 140 73.6
BcaC02g11048 Brassica carinata HOM05D005325 ORTHO05D008457 4.5e-59 231.5 147 71.4
vmacro02986 Vaccinium macrocarpon HOM05D005325 ORTHO05D008457 5.9e-59 231.1 142 71.1
BcaB02g10271 Brassica carinata HOM05D005325 ORTHO05D008457 1.0e-58 230.3 147 71.4
A05p15750 Brassica napus HOM05D005325 ORTHO05D008457 1.3e-58 229.9 147 72.1
DCAR_007389 Daucus carota HOM05D005325 ORTHO05D008457 1.7e-58 229.6 149 66.4
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.7e-58 229.6 143 70.6
BraA05t20490Z Brassica rapa HOM05D005325 ORTHO05D008457 2.2e-58 229.2 147 71.4
Eucgr.J01937 Eucalyptus grandis HOM05D005325 ORTHO05D008457 2.9e-58 228.8 147 68.0
Sopen09g014710 Solanum pennellii HOM05D005325 ORTHO05D008457 2.9e-58 228.8 151 66.9
VMungo0647G2564 Vigna mungo HOM05D005325 ORTHO05D008457 3.8e-58 228.4 151 65.6
Ah.08g220810 Amaranthus hybridus HOM05D005325 ORTHO05D008457 6.5e-58 227.6 151 65.6
Aa31LG5G6860 Aethionema arabicum HOM05D005325 ORTHO05D008457 8.5e-58 227.3 144 70.8
Manes.02G121500 Manihot esculenta HOM05D005325 ORTHO05D008457 8.5e-58 227.3 149 69.8
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 8.5e-58 227.3 151 67.5
Migut.D00728 Erythranthe guttata HOM05D005325 ORTHO05D008457 1.1e-57 226.9 143 71.3
CANSAT54G0458 Cannabis sativa HOM05D005325 ORTHO05D008457 1.5e-57 226.5 148 70.3
Solyc09g031770.3 Solanum lycopersicum HOM05D005325 ORTHO05D008457 1.5e-57 226.5 151 66.2
PSO339G0931 Papaver somniferum HOM05D005325 ORTHO05D008457 1.9e-57 226.1 148 67.6
AUR62001679 Chenopodium quinoa HOM05D005325 ORTHO05D008457 1.6e-56 223.0 153 66.0
Sc12g0000890 Simmondsia chinensis HOM05D005325 ORTHO05D008457 1.6e-56 223.0 143 70.6
C04p21170 Brassica napus HOM05D005325 ORTHO05D008457 2.1e-56 222.6 147 70.1
AUR62020101 Chenopodium quinoa HOM05D005325 ORTHO05D008457 2.1e-56 222.6 153 66.7
PSO384G1123 Papaver somniferum HOM05D005325 ORTHO05D008457 4.7e-56 221.5 148 66.2
SGA_v2.0_scaffold8G04497 Striga asiatica HOM05D005325 ORTHO05D008457 2.3e-55 219.2 140 67.9
BraA04t17802Z Brassica rapa HOM05D005325 ORTHO05D008457 8.8e-55 217.2 143 69.2
Lsat_1_v5_gn_5_172281 Lactuca sativa HOM05D005325 ORTHO05D008457 1.1e-54 216.9 153 63.4
Aqoxy4G02653 Aquilegia oxysepala HOM05D005325 ORTHO05D008457 2.0e-54 216.1 153 64.7
BolC4t27390H Brassica oleracea HOM05D005325 ORTHO05D008457 4.4e-54 214.9 143 68.5
BcaB06g28320 Brassica carinata HOM05D005325 ORTHO05D008457 9.7e-54 213.8 142 69.7
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 1.7e-53 213.0 146 65.1
Peaxi162Scf00116g00163 Petunia axillaris HOM05D005325 ORTHO05D008457 2.2e-53 212.6 154 62.3
A04p22570 Brassica napus HOM05D005325 ORTHO05D008457 1.1e-52 210.3 143 66.4
Os03g0265200 Oryza sativa ssp. japonica HOM05D005325 ORTHO05D008457 1.4e-52 209.9 146 62.3
Zm00001eb011730 Zea mays HOM05D005325 ORTHO05D008457 3.1e-52 208.8 149 60.4
EL10Ac7g16130 Beta vulgaris HOM05D005325 ORTHO05D008457 4.1e-52 208.4 151 64.9
BcaC02g08075 Brassica carinata HOM05D005325 ORTHO05D008457 2.0e-51 206.1 144 67.4
unitig_62.g23862 Utricularia gibba HOM05D005325 ORTHO05D008457 1.5e-49 199.9 150 60.0
unitig_64.g29774 Utricularia gibba HOM05D005325 ORTHO05D008457 1.5e-49 199.9 150 60.0
TAR636G1969 Trochodendron aralioides HOM05D005325 ORTHO05D008457 9.4e-49 197.2 122 68.0
HPP92_015197 Vanilla planifolia HOM05D005325 ORTHO05D008457 4.7e-48 194.9 143 60.1
Duzib168G2216 Durio zibethinus HOM05D005325 ORTHO05D008457 1.8e-47 193.0 138 62.3
TAR633G2421 Trochodendron aralioides HOM05D005325 ORTHO05D008457 3.0e-47 192.2 123 66.7
Lj1P141T46 Lonicera japonica HOM05D005325 ORTHO05D008457 2.0e-46 189.5 120 67.5
Nitab4.5_0006983g0030 Nicotiana tabacum HOM05D005325 ORTHO05D008457 1.7e-45 186.4 124 66.9
SHI11316 Sapria himalayana HOM05D005325 ORTHO05D008457 3.1e-44 182.2 142 59.2
Thhalv10017876m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 5.0e-42 174.9 114 65.8
Mapoly0026s0005 Marchantia polymorpha HOM05D005325 ORTHO05D008457 8.5e-42 174.1 140 55.0
CDE10G0077 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 2.5e-41 172.6 140 57.9
Pp3c13_16720 Physcomitrium patens HOM05D005325 ORTHO05D008457 1.6e-40 169.9 153 49.7
AagrBONN_evm.TU.Sc2ySwM_362.267 Anthoceros agrestis HOM05D005325 ORTHO05D008457 3.0e-39 165.6 149 49.7
AagrBONN_evm.TU.Sc2ySwM_362.272 Anthoceros agrestis HOM05D005325 ORTHO05D008457 1.1e-36 157.1 149 47.0
C04p58710 Brassica napus HOM05D005325 ORTHO05D008457 1.3e-34 150.2 107 63.6
MBI14_g39232_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 6.4e-29 131.3 127 52.8
SMO351G0628 Selaginella moellendorffii HOM05D005325 ORTHO05D008457 1.8e-28 129.8 144 45.8
Atru.chr3.4243 Acer truncatum HOM05D005325 ORTHO05D008457 4.4e-22 108.6 76 71.1
Haze_27525 Corylus avellana HOM05D005325 ORTHO05D008457 2.4e-20 102.8 158 38.6
Cre03.g146707 Chlamydomonas reinhardtii HOM05D005325 ORTHO05D008457 3.6e-16 89.0 171 37.4
Lsat_1_v5_gn_9_104180 Lactuca sativa HOM05D005325 ORTHO05D024237 5.8e-14 81.6 95 46.3
ClCG06G015800 Citrullus lanatus HOM05D005325 ORTHO05D008457 5.4e-12 75.1 124 37.9
Aa31LG5G6850 Aethionema arabicum HOM05D005325 ORTHO05D008457 4.0e-07 58.9 29 72.4


User provided reference genes

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