Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G1862 Fragaria x ananassa HOM05D000054 ORTHO05D005077 7.8e-49 196.8 100 100.0
FAN21G3260 Fragaria x ananassa HOM05D000054 ORTHO05D000171 3.0e-32 141.7 72 100.0
FvH4_3g06810 Fragaria vesca HOM05D000054 ORTHO05D000171 3.3e-31 138.3 72 97.2
RcHm_v2.0_Chr5g0012301 Rosa chinensis HOM05D000054 ORTHO05D000171 2.0e-28 129.0 74 90.5
FAN25G0989 Fragaria x ananassa HOM05D000054 ORTHO05D000171 5.8e-28 127.5 65 98.5
RcHm_v2.0_Chr5g0012291 Rosa chinensis HOM05D000054 ORTHO05D005077 7.6e-28 127.1 72 88.9
FAN16G2114 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.9e-27 125.2 70 90.0
FvH4_3g06830 Fragaria vesca HOM05D000054 ORTHO05D000171 8.4e-27 123.6 71 87.3
FAN11G2174 Fragaria x ananassa HOM05D000054 ORTHO05D000171 8.4e-27 123.6 65 93.8
FAN16G2145 Fragaria x ananassa HOM05D000054 ORTHO05D000171 7.3e-23 110.5 67 85.1
Prupe.4G069700 Prunus persica HOM05D000054 ORTHO05D000171 2.5e-15 85.5 67 73.1
MD05G1294500 Malus domestica HOM05D000054 ORTHO05D000171 3.1e-13 78.6 66 66.7
MD05G1294300 Malus domestica HOM05D000054 ORTHO05D000171 2.5e-10 68.9 67 62.7
MD10G1273000 Malus domestica HOM05D000054 ORTHO05D000171 2.5e-10 68.9 67 64.2
Prupe.4G069800 Prunus persica HOM05D000054 ORTHO05D000171 2.5e-10 68.9 64 57.8
QL04p017520 Quercus lobata HOM05D000054 ORTHO05D000171 1.2e-09 66.6 65 55.4
QL05p051919 Quercus lobata HOM05D000054 ORTHO05D000171 1.2e-09 66.6 65 55.4
Duzib235G0790 Durio zibethinus HOM05D000054 ORTHO05D000171 4.6e-09 64.7 70 55.7
QL04p017501 Quercus lobata HOM05D000054 ORTHO05D000171 6.0e-09 64.3 65 55.4
QL05p051904 Quercus lobata HOM05D000054 ORTHO05D000171 6.0e-09 64.3 65 55.4
Haze_05439 Corylus avellana HOM05D000054 ORTHO05D000171 1.0e-08 63.5 65 53.8
Haze_05421 Corylus avellana HOM05D000072 ORTHO05D000026 1.3e-08 63.2 65 52.3
Haze_05440 Corylus avellana HOM05D000054 ORTHO05D000171 2.3e-08 62.4 65 53.8
MD10G1273300 Malus domestica HOM05D000054 ORTHO05D000171 2.3e-08 62.4 77 48.1
CiPaw.09G134100 Carya illinoinensis HOM05D000054 ORTHO05D000171 3.9e-08 61.6 69 49.3
Manes.16G044700 Manihot esculenta HOM05D000054 ORTHO05D000171 5.1e-08 61.2 75 42.7
Cfa001070 Carpinus fangiana HOM05D000054 ORTHO05D002584 1.5e-07 59.7 66 50.0
CiPaw.09G134000 Carya illinoinensis HOM05D000054 ORTHO05D000171 3.3e-07 58.5 69 46.4
MD00G1006500 Malus domestica HOM05D000054 ORTHO05D000171 3.3e-07 58.5 77 44.2
Prupe.4G069300 Prunus persica HOM05D000054 ORTHO05D000171 3.3e-07 58.5 67 47.8
Prupe.4G069400 Prunus persica HOM05D000054 ORTHO05D000171 4.3e-07 58.2 66 50.0
Prupe.4G069500 Prunus persica HOM05D000054 ORTHO05D000171 7.4e-07 57.4 78 44.9
Prupe.4G069600 Prunus persica HOM05D000054 ORTHO05D000171 7.4e-07 57.4 66 50.0
MD10G1272300 Malus domestica HOM05D000054 ORTHO05D000171 9.6e-07 57.0 70 52.9
Haze_05438 Corylus avellana HOM05D000054 ORTHO05D000171 1.3e-06 56.6 68 52.9
MD10G1273200 Malus domestica HOM05D000054 ORTHO05D000171 1.3e-06 56.6 67 49.3
TWI73G0043 Tripterygium wilfordii HOM05D000054 ORTHO05D000171 1.3e-06 56.6 77 41.6
FvH4_3g06960 Fragaria vesca HOM05D000054 ORTHO05D000171 1.6e-06 56.2 69 50.7
FvH4_3g07041 Fragaria vesca HOM05D000054 ORTHO05D000171 1.6e-06 56.2 69 52.2
RcHm_v2.0_Chr5g0012321 Rosa chinensis HOM05D000054 ORTHO05D000171 1.6e-06 56.2 69 50.7
Cfa001078 Carpinus fangiana HOM05D000054 ORTHO05D005077 2.8e-06 55.5 72 50.0
RcHm_v2.0_Chr5g0034051 Rosa chinensis HOM05D000054 ORTHO05D000171 2.8e-06 55.5 64 48.4
RcHm_v2.0_Chr7g0226661 Rosa chinensis HOM05D000054 ORTHO05D000171 2.8e-06 55.5 66 50.0
Gohir.A06G127602 Gossypium hirsutum HOM05D000054 ORTHO05D000171 3.7e-06 55.1 65 50.8
Cfa001073 Carpinus fangiana HOM05D000054 ORTHO05D002584 4.8e-06 54.7 69 53.6
FvH4_3g20230 Fragaria vesca HOM05D000054 ORTHO05D000171 4.8e-06 54.7 67 44.8
CiPaw.09G134300 Carya illinoinensis HOM05D000054 ORTHO05D000171 6.2e-06 54.3 78 47.4
Dinv12726 Davidia involucrata HOM05D000054 ORTHO05D000171 6.2e-06 54.3 65 46.2
CANSAT35G0133 Cannabis sativa HOM05D000054 ORTHO05D000171 8.2e-06 53.9 67 50.7
Cfa001087 Carpinus fangiana HOM05D000054 ORTHO05D005077 8.2e-06 53.9 73 49.3
FAN11G3361 Fragaria x ananassa HOM05D000054 ORTHO05D000171 8.2e-06 53.9 64 46.9
FAN21G2154 Fragaria x ananassa HOM05D000054 ORTHO05D000171 8.2e-06 53.9 91 38.5
Potri.011G072866 Populus trichocarpa HOM05D000054 ORTHO05D000171 8.2e-06 53.9 79 41.8


User provided reference genes

Program Settings