Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G1856 Fragaria x ananassa HOM05D007084 ORTHO05D008776 1.3e-114 416.4 209 100.0
FvH4_3g02430 Fragaria vesca HOM05D007084 ORTHO05D008776 4.8e-101 371.3 200 94.5
FAN18G3368 Fragaria x ananassa HOM05D007084 ORTHO05D008776 1.8e-79 299.7 180 86.1
RcHm_v2.0_Chr5g0003681 Rosa chinensis HOM05D007084 ORTHO05D008776 2.3e-79 299.3 206 79.1
Prupe.4G023700 Prunus persica HOM05D007084 ORTHO05D008776 5.6e-65 251.5 219 66.7
MD05G1343100 Malus domestica HOM05D007084 ORTHO05D008776 1.7e-61 240.0 220 62.7
MD10G1318100 Malus domestica HOM05D007084 ORTHO05D008776 4.9e-61 238.4 222 64.4
CiPaw.09G089600 Carya illinoinensis HOM05D007084 ORTHO05D008776 8.6e-58 227.6 223 61.4
QL05p074023 Quercus lobata HOM05D007084 ORTHO05D008776 5.8e-54 214.9 213 57.7
CANSAT56G0381 Cannabis sativa HOM05D007084 ORTHO05D008776 1.3e-53 213.8 217 56.7
Sed0006702 Sechium edule HOM05D007084 ORTHO05D008776 1.9e-52 209.9 215 59.5
ClCG01G022070 Citrullus lanatus HOM05D007084 ORTHO05D008776 2.7e-51 206.1 224 54.9
CsaV3_6G049130 Cucumis sativus L. HOM05D007084 ORTHO05D008776 1.1e-49 200.7 218 53.2
Thecc.06G217700 Theobroma cacao HOM05D007084 ORTHO05D008776 1.9e-49 199.9 220 56.4
Manes.17G037300 Manihot esculenta HOM05D007084 ORTHO05D008776 2.5e-49 199.5 222 54.5
COL.COLO4_31746 Corchorus olitorius HOM05D007084 ORTHO05D008776 4.3e-49 198.7 221 55.7
Gohir.A06G147600 Gossypium hirsutum HOM05D007084 ORTHO05D008776 4.3e-49 198.7 222 54.1
Gorai.010G179400 Gossypium raimondii HOM05D007084 ORTHO05D008776 4.3e-49 198.7 222 54.5
AL6G48360 Arabidopsis lyrata HOM05D007084 ORTHO05D008776 7.3e-49 198.0 216 58.3
AT4G04870 Arabidopsis thaliana HOM05D007084 ORTHO05D008776 2.8e-48 196.1 219 57.5
MELO3C007382.2 Cucumis melo HOM05D007084 ORTHO05D008776 2.8e-48 196.1 218 52.8
Eucgr.D01306 Eucalyptus grandis HOM05D007084 ORTHO05D008776 1.4e-47 193.7 238 49.6
Haze_06776 Corylus avellana HOM05D007084 ORTHO05D008776 5.2e-47 191.8 216 55.6
Carub.0006s3278 Capsella rubella HOM05D007084 ORTHO05D008776 1.5e-46 190.3 216 56.5
BcaB01g01841 Brassica carinata HOM05D007084 ORTHO05D008776 2.0e-46 189.9 217 56.7
Duzib160G0109 Durio zibethinus HOM05D007084 ORTHO05D008776 2.6e-46 189.5 220 52.3
Thhalv10028782m.g Eutrema salsugineum HOM05D007084 ORTHO05D008776 3.4e-46 189.1 219 55.3
Cfa000247 Carpinus fangiana HOM05D007084 ORTHO05D008776 4.4e-46 188.7 215 54.4
CARHR252700 Cardamine hirsuta HOM05D007084 ORTHO05D008776 7.6e-46 188.0 216 55.1
THA.LOC104812962 Tarenaya hassleriana HOM05D007084 ORTHO05D008776 8.4e-45 184.5 227 52.9
BcaC04g21332 Brassica carinata HOM05D007084 ORTHO05D008776 1.1e-44 184.1 214 55.6
C09p33070 Brassica napus HOM05D007084 ORTHO05D008776 1.1e-44 184.1 214 55.6
A09p26060 Brassica napus HOM05D007084 ORTHO05D008776 1.4e-44 183.7 208 55.8
BraA09t38173Z Brassica rapa HOM05D007084 ORTHO05D008776 1.4e-44 183.7 211 55.9
BolC9t56141H Brassica oleracea HOM05D007084 ORTHO05D008776 2.4e-44 183.0 216 55.6
Dinv13874 Davidia involucrata HOM05D007084 ORTHO05D008776 4.2e-44 182.2 231 53.2
Hma1.2p1_0091F.1_g046270 Hydrangea macrophylla HOM05D007084 ORTHO05D008776 4.2e-44 182.2 223 52.0
Potri.004G018300 Populus trichocarpa HOM05D007084 ORTHO05D008776 2.7e-43 179.5 222 50.0
Sp6g04110 Schrenkiella parvula HOM05D007084 ORTHO05D008776 2.7e-43 179.5 219 52.1
Rhsim02G0110300 Rhododendron simsii HOM05D007084 ORTHO05D008776 4.6e-43 178.7 207 54.6
Aa31LG9G9630 Aethionema arabicum HOM05D007084 ORTHO05D008776 7.8e-43 177.9 220 52.7
TWI38G0963 Tripterygium wilfordii HOM05D007084 ORTHO05D008776 7.8e-43 177.9 225 50.7
Gohir.D06G153400 Gossypium hirsutum HOM05D007084 ORTHO05D008776 1.3e-42 177.2 212 52.4
Dinv20035 Davidia involucrata HOM05D007084 ORTHO05D008776 3.9e-42 175.6 233 51.9
TPR.G7634 Trifolium pratense HOM05D007084 ORTHO05D008776 3.9e-42 175.6 200 49.5
CSS0017809 Camellia sinensis var. sinensis HOM05D007084 ORTHO05D008776 8.7e-42 174.5 219 51.1
vmacro15815 Vaccinium macrocarpon HOM05D007084 ORTHO05D008776 8.7e-42 174.5 201 53.7
Ciclev10015907m.g Citrus clementina HOM05D007084 ORTHO05D008776 2.5e-41 172.9 210 50.5
Aqoxy2G01542 Aquilegia oxysepala HOM05D007084 ORTHO05D008776 7.3e-41 171.4 199 52.8
Medtr2g022840 Medicago truncatula HOM05D007084 ORTHO05D008776 7.3e-41 171.4 201 52.2
arahy.Tifrunner.gnm1.ann1.YK9IP3 Arachis hypogaea HOM05D007084 ORTHO05D008776 2.1e-40 169.9 214 48.1
TAR624G0375 Trochodendron aralioides HOM05D007084 ORTHO05D008776 2.1e-40 169.9 237 48.1
arahy.Tifrunner.gnm1.ann1.JJP1G0 Arachis hypogaea HOM05D007084 ORTHO05D008776 2.8e-40 169.5 214 48.1
Lj6g0011030 Lotus japonicus HOM05D007084 ORTHO05D008776 2.8e-40 169.5 202 48.5
MBI02_g28333_MAGBIO Magnolia biondii HOM05D007084 ORTHO05D008776 4.8e-40 168.7 229 48.9
Nn1g07109 Nelumbo nucifera HOM05D007084 ORTHO05D008776 6.2e-40 168.3 238 45.8
GSVIVG01012658001 Vitis vinifera HOM05D007084 ORTHO05D008776 6.2e-40 168.3 229 50.2
Sabra04G0010200 Salix brachista HOM05D007084 ORTHO05D008776 1.1e-39 167.5 221 46.2
Psat1g181960 Pisum sativum HOM05D007084 ORTHO05D008776 5.3e-39 165.2 204 48.5
Actinidia05525 Actinidia chinensis HOM05D007084 ORTHO05D008776 1.2e-38 164.1 219 48.9
Sc17g0007240 Simmondsia chinensis HOM05D007084 ORTHO05D008776 1.5e-38 163.7 209 45.9
ATR0752G074 Amborella trichopoda HOM05D007084 ORTHO05D008776 2.6e-38 162.9 235 46.0
Lsat_1_v5_gn_1_124280 Lactuca sativa HOM05D007084 ORTHO05D008776 5.8e-38 161.8 214 47.2
VMungo1215G0304 Vigna mungo HOM05D007084 ORTHO05D008776 5.8e-38 161.8 207 49.8
AUR62021978 Chenopodium quinoa HOM05D007084 ORTHO05D008776 1.3e-37 160.6 210 46.7
HanXRQChr01g0004301 Helianthus annuus HOM05D007084 ORTHO05D008776 1.7e-37 160.2 200 49.5
Migut.M01299 Erythranthe guttata HOM05D007084 ORTHO05D008776 1.4e-36 157.1 224 47.3
SalBow5G0122 Salvia bowleyana HOM05D007084 ORTHO05D008776 1.4e-36 157.1 226 48.2
Phvul.003G077300 Phaseolus vulgaris HOM05D007084 ORTHO05D008776 2.4e-36 156.4 208 49.0
Ca_00622_v3 Cicer arietinum L. HOM05D007084 ORTHO05D008776 3.2e-36 156.0 203 45.3
Glyma.07G259200 Glycine max HOM05D007084 ORTHO05D008776 4.6e-35 152.1 205 46.8
ECA248G3788 Erigeron canadensis HOM05D007084 ORTHO05D008776 5.1e-34 148.7 209 46.4
Lalb_Chr12g0196111 Lupinus albus HOM05D007084 ORTHO05D008776 8.7e-34 147.9 206 45.6
PSO832G2811 Papaver somniferum HOM05D007084 ORTHO05D008776 5.6e-33 145.2 223 45.7
HPP92_017602 Vanilla planifolia HOM05D007084 ORTHO05D008776 5.6e-33 145.2 219 44.3
Cc09_g01900 Coffea canephora HOM05D007084 ORTHO05D008776 2.8e-32 142.9 238 43.3
Sopen10g001280 Solanum pennellii HOM05D007084 ORTHO05D008776 2.4e-31 139.8 210 46.2
PGSC0003DMG400011258 Solanum tuberosum HOM05D007084 ORTHO05D008776 5.3e-31 138.7 210 45.7
Nitab4.5_0002155g0080 Nicotiana tabacum HOM05D007084 ORTHO05D008776 6.9e-31 138.3 223 43.5
Solyc10g005290.4 Solanum lycopersicum HOM05D007084 ORTHO05D008776 9.0e-31 137.9 210 45.2
Nitab4.5_0007448g0030 Nicotiana tabacum HOM05D007084 ORTHO05D008776 2.0e-30 136.7 164 51.2
CAN.G105.15 Capsicum annuum HOM05D007084 ORTHO05D008776 4.5e-30 135.6 224 42.9
Peaxi162Scf00203g00128 Petunia axillaris HOM05D007084 ORTHO05D008776 9.9e-30 134.4 220 43.2
Zm00001eb151100 Zea mays HOM05D007084 ORTHO05D008776 3.8e-29 132.5 214 43.5
Os01g0789100 Oryza sativa ssp. japonica HOM05D007084 ORTHO05D008776 6.4e-29 131.7 222 44.1
PSO210G7580 Papaver somniferum HOM05D007084 ORTHO05D008776 1.4e-28 130.6 141 54.6
DCAR_028171 Daucus carota HOM05D007084 ORTHO05D008776 2.1e-27 126.7 170 44.1
SGA_v2.0_scaffold7G03869 Striga asiatica HOM05D007084 ORTHO05D008776 7.9e-27 124.8 229 39.7
Cpa.g.sc198.29 Carica papaya HOM05D007084 ORTHO05D008776 7.4e-25 118.2 171 48.0
SEGI_14982 Sequoiadendron giganteum HOM05D007084 ORTHO05D008776 9.6e-25 117.9 196 43.4
AUR62012678 Chenopodium quinoa HOM05D007084 ORTHO05D008776 1.3e-24 117.5 138 49.3
EL10Ac8g20023 Beta vulgaris HOM05D007084 ORTHO05D008776 1.4e-23 114.0 214 39.3
Atru.chr10.2184 Acer truncatum HOM05D007084 ORTHO05D008776 1.2e-22 110.9 71 71.8
PSO591G0421 Papaver somniferum HOM05D007084 ORTHO05D008776 2.0e-22 110.2 70 72.9
Mapoly0072s0085 Marchantia polymorpha HOM05D007084 ORTHO05D008776 2.7e-19 99.8 69 71.0
Cre13.g604700 Chlamydomonas reinhardtii HOM05D007084 ORTHO05D008776 6.7e-18 95.1 86 55.8
unitig_748.g7583 Utricularia gibba HOM05D007084 ORTHO05D008776 1.5e-17 94.0 212 37.7
CDE11G1072 Ceratophyllum demersum HOM05D007084 ORTHO05D008776 3.7e-16 89.4 196 34.7
Pp3c12_14310 Physcomitrium patens HOM05D007084 ORTHO05D008776 8.2e-16 88.2 73 56.2
CBR_g8026 Chara braunii HOM05D007084 ORTHO05D008776 7.6e-14 81.6 73 52.1
SalBow5G2840 Salvia bowleyana HOM05D007084 ORTHO05D008776 5.5e-12 75.5 50 76.0
Lj1A1228T73 Lonicera japonica HOM05D007084 ORTHO05D008776 7.1e-12 75.1 50 76.0
Sed0024834 Sechium edule HOM05D007084 ORTHO05D008776 1.9e-09 67.0 50 62.0
MCO12G236 Micromonas commoda HOM05D007084 ORTHO05D008776 5.7e-09 65.5 75 46.7
Cfa023453 Carpinus fangiana HOM05D007084 ORTHO05D008776 6.3e-08 62.0 73 35.6
SMO361G0634 Selaginella moellendorffii HOM05D003162 ORTHO05D003599 6.3e-08 62.0 75 41.3
AUR62041623 Chenopodium quinoa HOM05D001691 ORTHO05D001704 1.8e-07 60.5 73 43.8
CARHR134040 Cardamine hirsuta HOM05D003162 ORTHO05D003599 4.1e-07 59.3 84 36.9
DCAR_015258 Daucus carota HOM05D003162 ORTHO05D003599 4.1e-07 59.3 87 39.1
Lj1A927T58 Lonicera japonica HOM05D003162 ORTHO05D003599 5.3e-07 58.9 99 32.3
Lj1C928T9 Lonicera japonica HOM05D003162 ORTHO05D003599 5.3e-07 58.9 99 32.3
Sed0008994 Sechium edule HOM05D003162 ORTHO05D003599 6.9e-07 58.5 73 38.4
MELO3C011715.2 Cucumis melo HOM05D003162 ORTHO05D003599 9.0e-07 58.2 73 39.7
CsaV3_5G006440 Cucumis sativus L. HOM05D003162 ORTHO05D003599 9.0e-07 58.2 73 39.7
Eucgr.G02785 Eucalyptus grandis HOM05D003162 ORTHO05D003599 9.0e-07 58.2 80 36.2
SHI28188 Sapria himalayana HOM05D003162 ORTHO05D003599 9.0e-07 58.2 97 34.0
CSS0020457 Camellia sinensis var. sinensis HOM05D003162 ORTHO05D003599 1.2e-06 57.8 73 39.7
Dinv25937 Davidia involucrata HOM05D003162 ORTHO05D003599 1.5e-06 57.4 73 39.7
Eucgr.J01141 Eucalyptus grandis HOM05D003162 ORTHO05D003599 1.5e-06 57.4 105 30.5
MD01G1114900 Malus domestica HOM05D003162 ORTHO05D003599 1.5e-06 57.4 74 39.2
MBI14_g14543_MAGBIO Magnolia biondii HOM05D003162 ORTHO05D003599 2.0e-06 57.0 90 33.3
MD07G1182900 Malus domestica HOM05D003162 ORTHO05D003599 2.0e-06 57.0 74 37.8
Manes.07G105600 Manihot esculenta HOM05D003162 ORTHO05D003599 2.0e-06 57.0 145 26.2
PRCOL_00002675 Prasinoderma coloniale HOM05D007084 ORTHO05D008776 2.0e-06 57.0 77 37.7
Prupe.2G221600 Prunus persica HOM05D003162 ORTHO05D003599 2.0e-06 57.0 73 37.0
Rhsim09G0155300 Rhododendron simsii HOM05D003162 ORTHO05D003599 2.0e-06 57.0 73 41.1
CANSAT56G1883 Cannabis sativa HOM05D003162 ORTHO05D003599 2.6e-06 56.6 74 36.5
ClCG02G013740 Citrullus lanatus HOM05D003162 ORTHO05D003599 2.6e-06 56.6 73 38.4
Duzib106G1404 Durio zibethinus HOM05D003162 ORTHO05D003599 3.4e-06 56.2 73 39.7
SalBow3G3363 Salvia bowleyana HOM05D003162 ORTHO05D003599 3.4e-06 56.2 120 32.5
Hund22438 Selenicereus undatus HOM05D003162 ORTHO05D003599 3.4e-06 56.2 73 41.1
unitig_0.g193 Utricularia gibba HOM05D003162 ORTHO05D003599 3.4e-06 56.2 98 32.7
Atru.chr12.605 Acer truncatum HOM05D003162 ORTHO05D003599 4.5e-06 55.8 73 38.4
EL10Ac2g03525 Beta vulgaris HOM05D003162 ORTHO05D003599 4.5e-06 55.8 95 36.8
Thhalv10016968m.g Eutrema salsugineum HOM05D003162 ORTHO05D003599 4.5e-06 55.8 73 37.0
Actinidia13844 Actinidia chinensis HOM05D003162 ORTHO05D003599 5.9e-06 55.5 90 32.2
Ah.16g108150 Amaranthus hybridus HOM05D003162 ORTHO05D003599 5.9e-06 55.5 111 35.1
BcaB01g03602 Brassica carinata HOM05D003162 ORTHO05D003599 5.9e-06 55.5 170 25.3
Carub.0005s2166 Capsella rubella HOM05D003162 ORTHO05D003599 5.9e-06 55.5 83 34.9
CiPaw.02G178100 Carya illinoinensis HOM05D003162 ORTHO05D003599 5.9e-06 55.5 73 38.4
Gohir.D04G081800 Gossypium hirsutum HOM05D003162 ORTHO05D003599 5.9e-06 55.5 100 30.0
Gorai.012G092300 Gossypium raimondii HOM05D003162 ORTHO05D003599 5.9e-06 55.5 100 30.0
HanXRQChr12g0370371 Helianthus annuus HOM05D003162 ORTHO05D003599 5.9e-06 55.5 76 36.8
Psat0s2399g0120 Pisum sativum HOM05D003162 ORTHO05D003599 5.9e-06 55.5 91 34.1
Hund19286 Selenicereus undatus HOM05D003162 ORTHO05D003599 5.9e-06 55.5 96 34.4
Gohir.A05G343500 Gossypium hirsutum HOM05D003162 ORTHO05D003599 7.7e-06 55.1 100 30.0
THA.LOC104825580 Tarenaya hassleriana HOM05D003162 ORTHO05D003599 7.7e-06 55.1 83 34.9
BraA04t18448Z Brassica rapa HOM05D000013 ORTHO05D000011 1.0e-05 54.7 100 34.0
Duzib114G0756 Durio zibethinus HOM05D003162 ORTHO05D003599 1.0e-05 54.7 73 38.4
Migut.F01785 Erythranthe guttata HOM05D003162 ORTHO05D003599 1.0e-05 54.7 99 35.4
Glyma.18G302100 Glycine max HOM05D003162 ORTHO05D003599 1.0e-05 54.7 85 29.4
Lalb_Chr02g0144191 Lupinus albus HOM05D003162 ORTHO05D003599 1.0e-05 54.7 74 36.5
PSO384G1082 Papaver somniferum HOM05D003162 ORTHO05D003599 1.0e-05 54.7 133 29.3


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