Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.2e-62 243.0 125 100.0
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.7e-61 239.2 125 98.4
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 4.2e-60 234.6 125 96.8
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 1.4e-58 229.6 123 94.3
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 8.5e-53 210.3 123 89.4
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 2.5e-52 208.8 121 88.4
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 1.7e-48 196.1 123 82.9
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 4.8e-48 194.5 121 81.8
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 1.1e-47 193.4 119 80.7
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 1.8e-47 192.6 122 77.9
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 2.4e-47 192.2 121 80.2
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 5.9e-46 187.6 122 76.2
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 5.9e-46 187.6 121 76.9
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.7e-45 186.0 121 81.0
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 1.7e-45 186.0 119 79.8
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 1.7e-45 186.0 121 77.7
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 1.7e-45 186.0 123 76.4
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 1.7e-45 186.0 121 77.7
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 2.2e-45 185.7 120 76.7
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 3.8e-45 184.9 121 80.2
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 5.0e-45 184.5 119 79.8
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 1.5e-44 183.0 119 79.0
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 1.9e-44 182.6 120 77.5
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 3.2e-44 181.8 118 74.6
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 3.2e-44 181.8 121 76.9
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 4.2e-44 181.4 122 74.6
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 4.2e-44 181.4 121 74.4
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 7.2e-44 180.6 118 75.4
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 7.2e-44 180.6 121 72.7
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 9.4e-44 180.3 123 74.8
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.7e-43 178.7 122 73.8
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 2.7e-43 178.7 122 73.8
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 3.6e-43 178.3 123 74.0
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 3.6e-43 178.3 119 74.8
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 4.7e-43 177.9 153 64.7
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 6.1e-43 177.6 118 75.4
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 8.0e-43 177.2 121 71.1
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 1.0e-42 176.8 117 73.5
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 1.4e-42 176.4 117 73.5
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.4e-42 176.4 121 71.1
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 3.0e-42 175.3 117 73.5
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 3.0e-42 175.3 123 74.0
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 4.0e-42 174.9 121 71.9
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 4.0e-42 174.9 117 72.6
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 4.0e-42 174.9 121 70.2
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 5.2e-42 174.5 119 73.9
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 6.8e-42 174.1 118 72.9
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 8.8e-42 173.7 116 73.3
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 8.8e-42 173.7 121 70.2
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 1.2e-41 173.3 117 71.8
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.2e-41 173.3 121 74.4
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 1.5e-41 172.9 121 69.4
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 2.0e-41 172.6 117 70.9
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 2.6e-41 172.2 117 70.9
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 2.6e-41 172.2 117 70.9
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 2.6e-41 172.2 117 70.9
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 2.6e-41 172.2 117 70.9
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.6e-41 172.2 116 72.4
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 3.4e-41 171.8 121 71.1
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 3.4e-41 171.8 118 72.0
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.4e-41 171.8 91 97.8
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 5.7e-41 171.0 122 68.0
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.7e-41 171.0 122 70.5
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 5.7e-41 171.0 120 70.0
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 1.7e-40 169.5 122 67.2
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 1.7e-40 169.5 117 68.4
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.2e-40 169.1 91 96.7
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 3.7e-40 168.3 118 69.5
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 3.7e-40 168.3 119 69.7
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 1.1e-39 166.8 123 65.9
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 2.4e-39 165.6 123 65.0
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 4.1e-39 164.9 122 70.5
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 7.0e-39 164.1 122 68.0
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 7.0e-39 164.1 122 68.0
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 9.1e-39 163.7 123 66.7
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 1.2e-38 163.3 123 65.9
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 1.6e-38 162.9 121 71.1
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 2.7e-38 162.2 118 66.1
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 5.9e-38 161.0 118 69.5
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 7.7e-38 160.6 135 61.5
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 2.3e-37 159.1 118 68.6
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 2.9e-37 158.7 115 66.1
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 2.9e-37 158.7 124 62.9
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 1.1e-36 156.8 122 60.7
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 1.5e-36 156.4 116 69.8
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 4.7e-35 151.4 109 67.0
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 4.7e-35 151.4 122 59.0
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 4.7e-35 151.4 118 60.2
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 8.0e-35 150.6 124 58.9
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 1.4e-34 149.8 112 64.3
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 1.4e-34 149.8 98 73.5
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 8.9e-34 147.1 105 68.6
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 5.7e-33 144.4 172 47.7
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 1.7e-32 142.9 89 80.9
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 2.0e-30 136.0 88 79.5
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.7e-30 135.6 113 59.3
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 2.9e-29 132.1 85 72.9
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 6.6e-29 131.0 91 73.6
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 8.6e-29 130.6 92 73.9
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 1.1e-28 130.2 88 73.9
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 1.8e-26 122.9 92 67.4
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 3.0e-26 122.1 94 61.7
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 3.4e-25 118.6 96 60.4
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 2.2e-24 115.9 115 53.0
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.1e-23 113.6 81 66.7
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.9e-23 112.8 118 48.3
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 1.2e-22 110.2 121 43.8
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 6.0e-22 107.8 112 43.8
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 1.3e-21 106.7 93 59.1
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.5e-20 103.2 83 56.6
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.2e-19 100.1 116 47.4
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 3.4e-17 92.0 54 77.8
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 2.6e-09 65.9 119 37.8


User provided reference genes

Program Settings