Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.6e-132 476.1 242 100.0
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 4.0e-123 444.9 249 91.6
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 2.0e-122 442.6 242 91.3
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.1e-120 436.8 247 90.3
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 8.3e-97 357.5 248 75.4
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 5.1e-94 348.2 196 90.8
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 6.8e-91 337.8 250 73.6
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 8.7e-86 320.9 249 69.9
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 2.4e-83 312.8 251 66.9
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 3.1e-83 312.4 251 66.9
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 1.7e-81 306.6 248 65.7
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 3.0e-78 295.8 222 68.5
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 4.5e-74 282.0 259 61.0
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 8.4e-73 277.7 257 61.5
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 5.4e-72 275.0 254 61.0
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 7.1e-72 274.6 248 60.5
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 9.3e-72 274.2 250 60.4
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 9.3e-72 274.2 251 59.4
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 2.1e-71 273.1 256 58.6
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 2.7e-71 272.7 256 59.4
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.1e-69 267.3 217 67.3
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 1.9e-69 266.5 249 59.0
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 3.3e-69 265.8 257 60.3
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 6.2e-68 261.5 209 69.4
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.1e-67 260.8 251 53.0
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 1.4e-67 260.4 215 65.1
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 5.3e-67 258.5 248 56.0
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 1.3e-65 253.8 247 56.7
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 1.7e-65 253.4 243 55.1
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 3.8e-65 252.3 254 56.3
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 4.9e-65 251.9 256 55.1
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 8.4e-65 251.1 253 56.5
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 8.4e-65 251.1 264 52.7
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 1.1e-64 250.8 250 54.0
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 7.1e-64 248.1 249 57.0
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 7.1e-64 248.1 252 56.3
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 9.3e-64 247.7 224 60.7
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.2e-63 247.3 257 56.0
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 7.9e-63 244.6 253 54.9
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.0e-62 244.2 211 56.9
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 3.0e-62 242.7 234 58.5
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 3.0e-62 242.7 210 57.6
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 3.9e-62 242.3 215 57.7
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 1.9e-61 240.0 235 54.9
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 1.9e-61 240.0 263 54.0
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 1.9e-61 240.0 253 53.8
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.6e-60 236.9 265 52.8
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 2.1e-60 236.5 255 52.9
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 3.7e-60 235.7 213 55.9
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 3.7e-60 235.7 185 64.9
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 8.2e-60 234.6 257 53.7
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.4e-59 233.8 214 57.5
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.8e-59 233.4 231 58.0
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 3.1e-59 232.6 260 52.7
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 1.2e-58 230.7 182 62.1
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 1.5e-58 230.3 182 61.0
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 1.5e-58 230.3 169 64.5
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 2.0e-58 229.9 182 61.0
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 4.5e-58 228.8 183 62.8
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 5.8e-58 228.4 182 60.4
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 7.6e-58 228.0 182 60.4
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 7.6e-58 228.0 182 60.4
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 7.6e-58 228.0 263 52.1
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.0e-57 227.6 191 63.9
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 1.3e-57 227.3 210 55.7
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 5.0e-57 225.3 167 64.7
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 6.5e-57 224.9 148 69.6
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.9e-56 223.4 238 55.9
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 3.2e-56 222.6 182 59.3
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 9.3e-56 221.1 168 64.3
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 4.6e-55 218.8 186 58.1
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 4.6e-55 218.8 219 54.8
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 7.9e-55 218.0 175 64.0
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.8e-54 216.9 182 58.8
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 3.9e-54 215.7 183 57.9
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 3.3e-53 212.6 246 52.0
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 5.7e-53 211.8 175 58.9
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 2.8e-52 209.5 210 56.2
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 1.1e-51 207.6 184 57.6
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 2.4e-51 206.5 176 59.7
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 5.3e-51 205.3 109 88.1
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 9.0e-51 204.5 173 59.5
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 9.0e-51 204.5 228 53.9
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 1.5e-50 203.8 305 40.0
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 2.0e-50 203.4 205 56.6
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 1.7e-49 200.3 226 52.2
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 6.5e-49 198.4 255 49.8
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 2.7e-47 193.0 173 59.0
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 1.0e-46 191.0 124 71.0
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 1.0e-46 191.0 348 38.8
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 3.9e-46 189.1 231 47.2
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 1.3e-44 184.1 276 42.8
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 6.9e-43 178.3 176 52.3
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 6.9e-43 178.3 142 57.0
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.5e-42 177.2 230 46.5
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 4.2e-40 169.1 173 57.8
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.0e-37 160.2 211 44.1
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.0e-37 160.2 211 44.1
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 3.3e-37 159.5 126 61.1
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 4.4e-37 159.1 216 47.7
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 2.0e-34 150.2 151 50.3
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 1.9e-32 143.7 162 48.1
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 2.5e-32 143.3 88 71.6
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 1.4e-30 137.5 161 42.9
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 1.7e-28 130.6 187 38.0
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 2.7e-26 123.2 88 68.2
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 9.4e-24 114.8 150 42.0
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 1.2e-23 114.4 253 33.6
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 1.0e-22 111.3 88 64.8
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 8.8e-22 108.2 88 61.4
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.1e-19 101.3 54 96.3
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 2.2e-12 77.0 186 37.1
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 1.8e-06 57.4 92 40.2


User provided reference genes

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