Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G1270 Fragaria x ananassa HOM05D000109 ORTHO05D022455 5.2e-51 204.1 106 100.0
FvH4_3g32961 Fragaria vesca HOM05D000109 ORTHO05D000965 2.2e-41 172.2 91 95.6
FAN11G3027 Fragaria x ananassa HOM05D000109 ORTHO05D000965 5.6e-37 157.5 84 94.0
RcHm_v2.0_Chr5g0009861 Rosa chinensis HOM05D000109 ORTHO05D000965 2.1e-36 155.6 94 84.0
FvH4_3g08211 Fragaria vesca HOM05D000109 ORTHO05D000965 9.8e-34 146.7 91 81.3
RcHm_v2.0_Chr5g0009931 Rosa chinensis HOM05D000109 ORTHO05D000965 1.1e-32 143.3 96 76.0
FAN16G0433 Fragaria x ananassa HOM05D000109 ORTHO05D000965 6.2e-28 127.5 85 77.6
MD05G1305900 Malus domestica HOM05D000109 ORTHO05D000965 1.7e-25 119.4 96 62.5
MD05G1305700 Malus domestica HOM05D000109 ORTHO05D000965 4.1e-24 114.8 94 61.7
Prupe.4G056600 Prunus persica HOM05D000109 ORTHO05D000965 6.0e-23 110.9 96 59.4
Prupe.4G056200 Prunus persica HOM05D000109 ORTHO05D000965 1.1e-21 106.7 94 58.5
MD05G1306400 Malus domestica HOM05D000109 ORTHO05D000965 4.3e-21 104.8 87 57.5
RcHm_v2.0_Chr5g0009981 Rosa chinensis HOM05D000109 ORTHO05D000965 8.9e-19 97.1 93 50.5
RcHm_v2.0_Chr5g0009951 Rosa chinensis HOM05D000109 ORTHO05D000965 7.5e-18 94.0 83 60.2
FvH4_3g32960 Fragaria vesca HOM05D000109 ORTHO05D000965 9.8e-18 93.6 83 59.0
FAN21G2318 Fragaria x ananassa HOM05D000109 ORTHO05D000965 9.8e-18 93.6 83 59.0
RcHm_v2.0_Chr5g0009881 Rosa chinensis HOM05D000109 ORTHO05D000965 6.4e-17 90.9 78 65.4
FAN08G3108 Fragaria x ananassa HOM05D000109 ORTHO05D000965 1.1e-16 90.1 93 47.3
FAN13G0638 Fragaria x ananassa HOM05D000109 ORTHO05D000965 1.1e-16 90.1 93 47.3
FAN21G3380 Fragaria x ananassa HOM05D000109 ORTHO05D000965 1.4e-16 89.7 83 55.4
FAN25G1791 Fragaria x ananassa HOM05D000109 ORTHO05D000965 1.4e-16 89.7 83 55.4
FAN04G1384 Fragaria x ananassa HOM05D000109 ORTHO05D000965 1.2e-15 86.7 93 46.2
FAN18G2079 Fragaria x ananassa HOM05D000109 ORTHO05D000965 2.7e-15 85.5 86 48.8
FvH4_5g21700 Fragaria vesca HOM05D000109 ORTHO05D000965 3.5e-15 85.1 93 45.2
FvH4_3g08210 Fragaria vesca HOM05D000109 ORTHO05D000965 6.0e-15 84.3 98 49.0
FAN11G1271 Fragaria x ananassa HOM05D000109 ORTHO05D000965 6.0e-15 84.3 98 49.0
CiPaw.10G056300 Carya illinoinensis HOM05D000109 ORTHO05D000965 1.7e-14 82.8 80 53.8
QL05p044096 Quercus lobata HOM05D000109 ORTHO05D000965 3.9e-14 81.6 85 56.5
CiPaw.10G056200 Carya illinoinensis HOM05D000109 ORTHO05D000965 1.1e-13 80.1 74 55.4
FAN14G3987 Fragaria x ananassa HOM05D000109 ORTHO05D000965 3.3e-13 78.6 96 44.8
FvH4_6g22211 Fragaria vesca HOM05D000109 ORTHO05D000965 5.6e-13 77.8 96 44.8
CANSAT35G1439 Cannabis sativa HOM05D000109 ORTHO05D000965 7.3e-13 77.4 93 46.2
FAN14G1526 Fragaria x ananassa HOM05D000109 ORTHO05D000965 7.3e-13 77.4 83 48.2
Thecc.06G176800 Theobroma cacao HOM05D000109 ORTHO05D000965 2.8e-12 75.5 93 45.2
Potri.004G052600 Populus trichocarpa HOM05D000109 ORTHO05D000965 4.7e-12 74.7 84 46.4
Hma1.2p1_0155F.1_g068500 Hydrangea macrophylla HOM05D000109 ORTHO05D000965 1.1e-11 73.6 82 48.8
Oeu026695.1 Olea europaea HOM05D000109 ORTHO05D000965 1.4e-11 73.2 91 39.6
Rhsim02G0138600 Rhododendron simsii HOM05D000109 ORTHO05D000965 1.4e-11 73.2 94 45.7
Medtr2g015310 Medicago truncatula HOM05D000109 ORTHO05D000965 2.3e-11 72.4 97 41.2
Duzib235G1233 Durio zibethinus HOM05D000109 ORTHO05D000965 3.1e-11 72.0 80 50.0
Lj6g0001286 Lotus japonicus HOM05D000109 ORTHO05D000965 5.2e-11 71.2 93 39.8
Rhsim02G0138900 Rhododendron simsii HOM05D000109 ORTHO05D000965 6.8e-11 70.9 84 48.8
Oeu045071.1 Olea europaea HOM05D000109 ORTHO05D000965 8.9e-11 70.5 84 41.7
TPR.G11721 Trifolium pratense HOM05D000109 ORTHO05D000965 8.9e-11 70.5 93 39.8
Haze_06292 Corylus avellana HOM05D000109 ORTHO05D000965 1.5e-10 69.7 84 46.4
FAN16G1709 Fragaria x ananassa HOM05D000109 ORTHO05D000965 2.0e-10 69.3 35 91.4
Haze_06287 Corylus avellana HOM05D000109 ORTHO05D000965 4.4e-10 68.2 94 42.6
Potri.004G052400 Populus trichocarpa HOM05D000109 ORTHO05D000965 4.4e-10 68.2 89 38.2
Potri.011G062600 Populus trichocarpa HOM05D000109 ORTHO05D000965 4.4e-10 68.2 84 46.4
Lalb_Chr20g0121391 Lupinus albus HOM05D000109 ORTHO05D000965 5.8e-10 67.8 84 42.9
Duzib235G1367 Durio zibethinus HOM05D000109 ORTHO05D000965 7.6e-10 67.4 90 43.3
Rhsim13G0184700 Rhododendron simsii HOM05D000109 ORTHO05D000965 9.9e-10 67.0 94 40.4
TAR629G0641 Trochodendron aralioides HOM05D000109 ORTHO05D022455 1.3e-09 66.6 82 46.3
Lalb_Chr05g0218701 Lupinus albus HOM05D000109 ORTHO05D000965 1.7e-09 66.2 75 42.7
Phvul.006G179300 Phaseolus vulgaris HOM05D000109 ORTHO05D000965 1.7e-09 66.2 78 47.4
QL05p044064 Quercus lobata HOM05D000109 ORTHO05D000965 1.7e-09 66.2 78 48.7
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 2.2e-09 65.9 81 43.2
Ciclev10018204m.g Citrus clementina HOM05D000109 ORTHO05D000965 2.9e-09 65.5 63 52.4
Gohir.A10G029450 Gossypium hirsutum HOM05D000109 ORTHO05D000965 2.9e-09 65.5 79 48.1
TAR629G0387 Trochodendron aralioides HOM05D000109 ORTHO05D000965 2.9e-09 65.5 81 43.2
Glyma.13G172100 Glycine max HOM05D000109 ORTHO05D000965 3.8e-09 65.1 83 38.6
Thecc.06G176700 Theobroma cacao HOM05D000109 ORTHO05D000965 3.8e-09 65.1 80 43.8
Glyma.07G203700 Glycine max HOM05D000109 ORTHO05D000965 4.9e-09 64.7 84 36.9
FAN25G3199 Fragaria x ananassa HOM05D000109 ORTHO05D000965 6.4e-09 64.3 34 85.3
Lalb_Chr05g0218671 Lupinus albus HOM05D000109 ORTHO05D000965 6.4e-09 64.3 83 39.8
Sabra11G0044400 Salix brachista HOM05D000109 ORTHO05D000965 6.4e-09 64.3 84 44.0
Sabra11G0044800 Salix brachista HOM05D000109 ORTHO05D000965 6.4e-09 64.3 90 42.2
Haze_06316 Corylus avellana HOM05D000109 ORTHO05D000965 8.4e-09 63.9 77 44.2
Medtr2g015290 Medicago truncatula HOM05D000109 ORTHO05D000965 8.4e-09 63.9 94 42.6
Sabra11G0042800 Salix brachista HOM05D000109 ORTHO05D000965 8.4e-09 63.9 90 42.2
TWI63G1564 Tripterygium wilfordii HOM05D000109 ORTHO05D000965 8.4e-09 63.9 66 48.5
Cfa000562 Carpinus fangiana HOM05D000109 ORTHO05D000965 1.1e-08 63.5 85 44.7
Potri.011G063050 Populus trichocarpa HOM05D000109 ORTHO05D022455 1.1e-08 63.5 84 45.2
TAR629G1489 Trochodendron aralioides HOM05D000109 ORTHO05D000965 1.1e-08 63.5 62 51.6
Potri.011G062900 Populus trichocarpa HOM05D000109 ORTHO05D000965 1.4e-08 63.2 84 45.2
Sabra04G0034000 Salix brachista HOM05D000109 ORTHO05D000965 1.4e-08 63.2 79 43.0
arahy.Tifrunner.gnm1.ann1.I9PNI4 Arachis hypogaea HOM05D000109 ORTHO05D000965 1.9e-08 62.8 70 42.9
Lj4g0011646 Lotus japonicus HOM05D000109 ORTHO05D000965 1.9e-08 62.8 69 42.0
Psat7g118200 Pisum sativum HOM05D000109 ORTHO05D000965 1.9e-08 62.8 82 39.0
TPR.G11792 Trifolium pratense HOM05D000109 ORTHO05D000965 1.9e-08 62.8 84 38.1
TPR.G16281 Trifolium pratense HOM05D000109 ORTHO05D000965 1.9e-08 62.8 76 42.1
arahy.Tifrunner.gnm1.ann1.3QP4KI Arachis hypogaea HOM05D000109 ORTHO05D000965 2.4e-08 62.4 70 42.9
Haze_06312 Corylus avellana HOM05D000109 ORTHO05D000965 2.4e-08 62.4 73 45.2
Gohir.D10G030300 Gossypium hirsutum HOM05D000109 ORTHO05D000965 2.4e-08 62.4 78 47.4
Gorai.011G032200 Gossypium raimondii HOM05D000109 ORTHO05D000965 2.4e-08 62.4 85 43.5
Lalb_Chr05g0218691 Lupinus albus HOM05D000109 ORTHO05D000965 3.2e-08 62.0 75 41.3
Nn1g04299 Nelumbo nucifera HOM05D000109 ORTHO05D000965 3.2e-08 62.0 86 43.0
Phvul.003G057300 Phaseolus vulgaris HOM05D000109 ORTHO05D000965 3.2e-08 62.0 79 44.3
Sabra11G0044700 Salix brachista HOM05D000109 ORTHO05D000965 3.2e-08 62.0 90 41.1
Glyma.13G233400 Glycine max HOM05D000109 ORTHO05D000965 4.1e-08 61.6 76 42.1
Medtr2g015280 Medicago truncatula HOM05D000109 ORTHO05D000965 4.1e-08 61.6 93 40.9
TAR629G1075 Trochodendron aralioides HOM05D000109 ORTHO05D000965 4.1e-08 61.6 82 42.7
VMungo0540G2108 Vigna mungo HOM05D000109 ORTHO05D000965 7.1e-08 60.8 78 44.9
Gorai.011G031900 Gossypium raimondii HOM05D000109 ORTHO05D000965 9.2e-08 60.5 64 42.2
VMungo0251G2583 Vigna mungo HOM05D000109 ORTHO05D000965 9.2e-08 60.5 78 39.7
Cfa000560 Carpinus fangiana HOM05D000109 ORTHO05D000965 1.2e-07 60.1 71 40.8
Gorai.009G164900 Gossypium raimondii HOM05D000109 ORTHO05D000965 1.6e-07 59.7 88 38.6
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 2.1e-07 59.3 88 35.2
Cfa000561 Carpinus fangiana HOM05D000109 ORTHO05D000965 2.1e-07 59.3 77 40.3
Haze_06296 Corylus avellana HOM05D000109 ORTHO05D000965 2.1e-07 59.3 82 42.7
Lj4g0026262 Lotus japonicus HOM05D000109 ORTHO05D000965 2.1e-07 59.3 73 39.7
Sabra04G0033400 Salix brachista HOM05D000109 ORTHO05D000965 2.1e-07 59.3 86 36.0
TWI38G0979 Tripterygium wilfordii HOM05D000109 ORTHO05D000965 2.1e-07 59.3 81 44.4
Medtr2g015270 Medicago truncatula HOM05D000109 ORTHO05D000965 2.7e-07 58.9 84 36.9
Medtr4g087925 Medicago truncatula HOM05D000109 ORTHO05D000965 2.7e-07 58.9 73 39.7
Sabra16G0247200 Salix brachista HOM05D000109 ORTHO05D000965 2.7e-07 58.9 78 47.4
Lj6g0012836 Lotus japonicus HOM05D000109 ORTHO05D000965 4.6e-07 58.2 87 35.6
arahy.Tifrunner.gnm1.ann1.WD6NID Arachis hypogaea HOM05D000109 ORTHO05D000965 6.0e-07 57.8 57 49.1
HanXRQChr15g0481291 Helianthus annuus HOM05D000109 ORTHO05D000965 7.8e-07 57.4 83 38.6
GSVIVG01021161001 Vitis vinifera HOM05D000109 ORTHO05D000965 7.8e-07 57.4 73 43.8
TPR.G11713 Trifolium pratense HOM05D000109 ORTHO05D000965 1.0e-06 57.0 61 44.3
CSS0014467 Camellia sinensis var. sinensis HOM05D000109 ORTHO05D000965 1.3e-06 56.6 87 42.5
CSS0043304 Camellia sinensis var. sinensis HOM05D000109 ORTHO05D000965 1.3e-06 56.6 87 41.4
Sabra04G0033200 Salix brachista HOM05D000109 ORTHO05D000965 1.3e-06 56.6 86 34.9
DCAR_006588 Daucus carota HOM05D000109 ORTHO05D000965 1.7e-06 56.2 98 40.8
Gohir.A10G029750 Gossypium hirsutum HOM05D000109 ORTHO05D000965 1.7e-06 56.2 85 38.8
CiPaw.10G106600 Carya illinoinensis HOM05D000109 ORTHO05D000965 2.3e-06 55.8 61 45.9
DCAR_007974 Daucus carota HOM05D000109 ORTHO05D000965 2.3e-06 55.8 80 43.8
Sabra04G0033800 Salix brachista HOM05D000109 ORTHO05D000965 2.3e-06 55.8 82 35.4
CiPaw.10G055900 Carya illinoinensis HOM05D000109 ORTHO05D000965 3.0e-06 55.5 65 43.1
Cc02_g14360 Coffea canephora HOM05D000109 ORTHO05D000965 3.0e-06 55.5 79 38.0
Haze_06314 Corylus avellana HOM05D000109 ORTHO05D000965 3.9e-06 55.1 65 43.1
Ca_30161_v3 Cicer arietinum L. HOM05D000109 ORTHO05D000965 6.6e-06 54.3 79 38.0
ECA236G0800 Erigeron canadensis HOM05D000109 ORTHO05D000965 6.6e-06 54.3 87 37.9
FAN11G3284 Fragaria x ananassa HOM05D000109 ORTHO05D000965 6.6e-06 54.3 31 80.6
VMungo0540G0941 Vigna mungo HOM05D000109 ORTHO05D000965 6.6e-06 54.3 99 35.4


User provided reference genes

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