Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.8e-116 422.5 207 100.0
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 1.2e-91 340.1 225 80.0
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 7.2e-89 330.9 211 81.5
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.3e-85 320.1 220 78.6
FvH4_4g03221 Fragaria vesca HOM05D000014 ORTHO05D000016 6.3e-69 264.6 219 68.9
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 8.8e-63 244.2 213 61.0
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 1.4e-60 236.9 194 68.6
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 5.9e-59 231.5 213 58.2
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 8.3e-53 211.1 216 55.1
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 2.4e-52 209.5 213 53.1
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 5.9e-51 204.9 203 54.7
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 2.8e-48 196.1 200 56.5
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 4.0e-47 192.2 208 53.4
FAN03G1875 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.7e-37 159.1 152 59.9
FAN22G0652 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.0e-32 141.4 180 51.7
FAN11G0973 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.1e-31 139.4 168 48.8
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 2.6e-30 136.3 113 61.1
FAN28G2081 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.7e-29 132.5 92 80.4
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 6.4e-29 131.7 194 42.3
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 1.0e-26 124.4 96 60.4
FAN13G1958 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.8e-24 116.3 67 83.6
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 6.8e-23 111.7 93 57.0
FAN16G3103 Fragaria x ananassa HOM05D008321 ORTHO05D003768 6.8e-23 111.7 126 52.4
FAN18G0245 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.9e-23 111.3 142 48.6
FAN18G1459 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.5e-22 110.5 59 93.2
FAN23G0987 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.0e-22 110.2 59 93.2
FAN16G0148 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.6e-22 109.8 82 75.6
FAN10G2328 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.7e-21 105.9 125 52.0
FvH4_1g29373 Fragaria vesca HOM05D008321 ORTHO05D003768 8.3e-21 104.8 91 53.8
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.2e-20 102.8 88 55.7
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.1e-20 102.4 84 56.0
FvH4_5g27660 Fragaria vesca HOM05D004804 ORTHO05D005882 1.6e-19 100.5 79 60.8
FAN24G2086 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.5e-17 93.2 57 73.7
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 4.3e-17 92.4 125 48.0
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 2.4e-15 86.7 198 30.8
FvH4_6g29801 Fragaria vesca HOM05D008321 ORTHO05D003768 6.8e-15 85.1 43 90.7
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.2e-14 84.3 198 29.3
FAN27G1268 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.2e-14 84.3 96 54.2
FvH4_4g17212 Fragaria vesca HOM05D008321 ORTHO05D003768 1.7e-13 80.5 161 33.5
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.8e-13 79.3 198 28.3
FAN12G0755 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.4e-13 78.2 158 32.9
FAN19G0969 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.4e-13 78.2 161 33.5
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.1e-12 77.8 112 35.7
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 2.7e-11 73.2 201 31.8
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 2.7e-11 73.2 243 28.8
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 4.6e-11 72.4 105 33.3
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 7.8e-11 71.6 192 33.3
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 7.8e-11 71.6 208 28.4
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 2.3e-10 70.1 198 29.8
FvH4_4g15580 Fragaria vesca HOM05D003127 ORTHO05D003768 3.0e-10 69.7 168 35.1
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 6.6e-10 68.6 73 42.5
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.6e-10 68.6 73 41.1
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.6e-10 68.6 188 29.8
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 8.7e-10 68.2 190 30.0
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 1.1e-09 67.8 113 36.3
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 1.5e-09 67.4 246 27.6
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 3.3e-09 66.2 76 39.5
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.3e-09 65.1 188 29.3
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 9.6e-09 64.7 197 25.4
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 1.2e-08 64.3 188 29.3
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-08 64.3 186 29.0
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.2e-08 64.3 195 30.3
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 1.2e-08 64.3 256 27.7
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-08 63.5 73 39.7
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 3.6e-08 62.8 106 34.9
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 4.7e-08 62.4 225 28.4
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.2e-08 62.0 80 38.8
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.1e-07 61.2 71 39.4
FAN08G3642 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.4e-07 60.8 49 49.0
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-07 60.5 187 26.2
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 1.8e-07 60.5 65 47.7
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 1.8e-07 60.5 65 47.7
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 3.1e-07 59.7 235 27.7
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.0e-07 59.3 202 26.7
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 4.0e-07 59.3 201 27.4
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.3e-07 58.9 202 26.7
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.0e-07 58.2 191 29.8
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.0e-07 58.2 187 27.8
FAN18G1520 Fragaria x ananassa HOM05D004804 ORTHO05D003768 9.0e-07 58.2 84 41.7
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 9.0e-07 58.2 201 28.4
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 9.0e-07 58.2 201 28.4
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 9.0e-07 58.2 201 28.4
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 1.2e-06 57.8 73 38.4
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-06 57.4 193 29.0
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 2.0e-06 57.0 207 26.6
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 2.0e-06 57.0 231 27.3
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.6e-06 56.6 201 26.4
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-06 56.6 67 37.3
RcHm_v2.0_Chr6g0280321 Rosa chinensis HOM05D009091 ORTHO05D003768 2.6e-06 56.6 133 34.6
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.4e-06 55.8 182 28.6
PSO675G7499 Papaver somniferum HOM05D008526 ORTHO05D010380 4.4e-06 55.8 211 25.1
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 5.8e-06 55.5 203 26.1
RcHm_v2.0_Chr3g0496641 Rosa chinensis HOM05D009091 ORTHO05D003768 5.8e-06 55.5 139 35.3
MBI17_g18122_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 7.6e-06 55.1 106 29.2
PSO339G6242 Papaver somniferum HOM05D008526 ORTHO05D010380 7.6e-06 55.1 200 26.0
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 9.9e-06 54.7 65 33.8
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.9e-06 54.7 228 25.4
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 9.9e-06 54.7 201 25.9


User provided reference genes

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