Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 7.3e-119 430.6 229 100.0
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 1.8e-88 329.7 229 82.1
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.0e-88 328.9 211 85.8
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 1.5e-71 273.5 226 71.2
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 7.2e-66 254.6 216 72.7
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 1.8e-61 240.0 227 63.0
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 4.1e-61 238.8 227 63.4
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 1.3e-54 217.2 226 61.1
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 8.6e-51 204.5 226 54.9
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 1.2e-49 200.7 222 54.5
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 1.6e-49 200.3 223 55.6
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 3.0e-48 196.1 226 55.3
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 6.8e-48 194.9 219 55.3
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 2.6e-47 193.0 226 52.7
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 3.4e-47 192.6 220 54.5
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 1.3e-46 190.7 227 53.3
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 2.4e-45 186.4 226 52.2
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 2.7e-44 183.0 218 50.0
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 3.5e-44 182.6 219 48.9
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 2.3e-43 179.9 223 48.9
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 2.9e-43 179.5 221 52.5
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 2.5e-42 176.4 223 49.3
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 5.6e-42 175.3 226 48.7
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 2.8e-41 172.9 218 48.6
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 3.6e-41 172.6 218 49.1
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 8.0e-41 171.4 227 50.7
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 3.1e-40 169.5 217 48.4
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 5.2e-40 168.7 227 47.6
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 8.9e-40 167.9 247 45.7
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.5e-39 167.2 223 47.1
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 2.6e-39 166.4 226 47.3
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 4.4e-39 165.6 223 48.4
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 9.8e-39 164.5 208 51.4
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 1.3e-38 164.1 223 47.1
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 3.7e-38 162.5 231 46.8
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 1.6e-36 157.1 220 47.3
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 2.7e-36 156.4 220 49.1
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 4.6e-36 155.6 222 45.9
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 7.8e-36 154.8 223 45.3
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 7.8e-36 154.8 223 45.3
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 3.9e-35 152.5 216 48.6
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 1.2e-33 147.5 229 45.0
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 1.2e-33 147.5 167 49.1
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 1.8e-32 143.7 226 44.2
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 5.2e-32 142.1 180 52.8
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 6.8e-32 141.7 169 55.0
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 6.8e-32 141.7 179 52.0
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 1.2e-31 141.0 180 52.8
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 2.0e-31 140.2 175 52.6
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 4.4e-31 139.0 238 42.9
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 7.5e-31 138.3 180 50.0
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 1.7e-30 137.1 226 44.2
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 2.2e-30 136.7 180 51.1
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 4.9e-30 135.6 208 43.8
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 8.3e-30 134.8 220 41.8
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 1.1e-29 134.4 227 42.7
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 4.1e-29 132.5 216 42.6
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 4.1e-29 132.5 180 47.8
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 4.1e-29 132.5 232 42.7
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 5.4e-29 132.1 197 46.2
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 1.6e-28 130.6 216 42.6
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 6.0e-28 128.6 164 49.4
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.1e-26 124.4 210 41.0
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 1.6e-25 120.6 163 49.1
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 1.6e-25 120.6 218 41.3
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 8.1e-25 118.2 144 49.3
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 1.4e-24 117.5 108 57.4
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 6.8e-24 115.2 143 48.3
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.2e-23 114.4 170 46.5
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 3.4e-23 112.8 116 52.6
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 1.7e-22 110.5 113 54.9
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 3.7e-22 109.4 164 47.6
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.6e-20 104.0 220 38.2
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 2.7e-20 103.2 220 39.1
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 4.6e-20 102.4 220 38.6
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.8e-20 101.7 163 44.8
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 1.7e-19 100.5 181 42.0
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.9e-19 99.4 180 42.8
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 2.1e-17 93.6 162 43.8
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 2.6e-15 86.7 118 52.5
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 5.8e-15 85.5 214 35.0
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 7.6e-15 85.1 124 46.8
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 1.3e-14 84.3 88 62.5
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.7e-14 84.0 161 36.6
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 2.2e-14 83.6 115 37.4
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 2.2e-14 83.6 161 37.3
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 6.4e-14 82.0 138 37.7
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.6e-12 77.4 149 38.9
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 6.0e-12 75.5 126 39.7
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.0e-11 74.7 104 44.2
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.5e-10 70.1 92 46.7
Ah.16g109120 Amaranthus hybridus HOM05D007451 ORTHO05D009399 1.6e-09 67.4 110 40.9
BolC4t23024H Brassica oleracea HOM05D007451 ORTHO05D009399 2.1e-09 67.0 74 44.6
arahy.Tifrunner.gnm1.ann1.D76417 Arachis hypogaea HOM05D007451 ORTHO05D009399 6.2e-09 65.5 117 40.2
Gorai.010G163100 Gossypium raimondii HOM05D007451 ORTHO05D009399 6.2e-09 65.5 211 29.9
MBI06_g46402_MAGBIO Magnolia biondii HOM05D000482 ORTHO05D000349 5.3e-08 62.4 101 40.6
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.9e-08 62.0 96 42.7
BcaC02g11526 Brassica carinata HOM05D007451 ORTHO05D009399 3.4e-07 59.7 57 50.9
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 5.8e-07 58.9 64 53.1
Hund21366 Selenicereus undatus HOM05D007451 ORTHO05D009399 9.9e-07 58.2 165 30.3
BcaB06g28783 Brassica carinata HOM05D007451 ORTHO05D009399 1.7e-06 57.4 68 45.6


User provided reference genes

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