Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 7.4e-77 290.4 142 100.0
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 7.4e-77 290.4 142 100.0
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.1e-75 286.6 142 98.6
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 2.7e-71 271.9 142 93.7
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 2.1e-63 245.7 140 83.6
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 6.0e-63 244.2 140 84.3
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 3.0e-62 241.9 139 84.9
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 8.7e-62 240.4 136 84.6
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 1.1e-61 240.0 139 82.7
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 7.4e-61 237.3 140 82.1
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 9.7e-61 236.9 139 81.3
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 9.7e-61 236.9 139 81.3
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 1.6e-60 236.1 139 82.0
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 6.3e-60 234.2 135 83.7
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 5.3e-59 231.1 138 80.4
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 6.9e-59 230.7 140 80.0
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 6.9e-59 230.7 136 81.6
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 2.0e-58 229.2 140 79.3
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 2.0e-58 229.2 139 79.1
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 4.5e-58 228.0 139 77.7
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 5.9e-58 227.6 139 76.3
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 7.6e-58 227.3 134 81.3
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 1.0e-57 226.9 136 79.4
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 1.3e-57 226.5 139 76.3
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 1.7e-57 226.1 139 77.0
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 1.7e-57 226.1 142 75.4
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 2.9e-57 225.3 140 78.6
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 3.8e-57 224.9 136 80.9
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 5.0e-57 224.6 136 80.9
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 5.0e-57 224.6 136 80.9
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 5.0e-57 224.6 136 80.9
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 5.0e-57 224.6 136 80.9
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 5.0e-57 224.6 135 77.0
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 6.5e-57 224.2 139 78.4
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 6.5e-57 224.2 137 78.1
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 6.5e-57 224.2 137 80.3
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 1.1e-56 223.4 136 80.9
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 1.1e-56 223.4 134 79.9
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 1.1e-56 223.4 136 80.9
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 1.1e-56 223.4 138 77.5
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 1.4e-56 223.0 134 79.9
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 1.4e-56 223.0 136 80.1
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 1.4e-56 223.0 135 77.0
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 2.5e-56 222.2 134 79.9
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 2.5e-56 222.2 139 77.7
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 3.2e-56 221.9 135 75.6
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 5.5e-56 221.1 134 75.4
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 5.5e-56 221.1 134 79.9
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 7.2e-56 220.7 135 79.3
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 7.2e-56 220.7 136 76.5
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 7.2e-56 220.7 140 77.1
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 9.3e-56 220.3 138 76.8
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 9.3e-56 220.3 141 73.8
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 1.2e-55 219.9 141 75.9
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 1.6e-55 219.5 139 78.4
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 2.1e-55 219.2 137 80.3
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 2.1e-55 219.2 137 80.3
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 2.1e-55 219.2 141 78.0
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 2.1e-55 219.2 135 78.5
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 2.7e-55 218.8 142 71.8
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 2.7e-55 218.8 135 79.3
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 4.6e-55 218.0 137 79.6
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 4.6e-55 218.0 141 74.5
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 4.6e-55 218.0 138 78.3
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 7.9e-55 217.2 138 76.1
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 7.9e-55 217.2 138 76.1
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 7.9e-55 217.2 136 78.7
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 1.0e-54 216.9 134 76.9
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.3e-54 216.5 139 75.5
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 1.3e-54 216.5 139 75.5
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 1.3e-54 216.5 138 75.4
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 1.8e-54 216.1 137 79.6
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 3.0e-54 215.3 140 73.6
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 3.9e-54 214.9 136 77.2
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 5.1e-54 214.5 137 75.9
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 6.7e-54 214.2 142 71.8
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 8.7e-54 213.8 141 72.3
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 8.7e-54 213.8 139 75.5
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 8.7e-54 213.8 139 74.8
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.5e-53 212.2 141 71.6
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 2.5e-53 212.2 139 73.4
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 9.7e-53 210.3 142 80.3
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 9.7e-53 210.3 135 77.0
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.3e-52 209.9 141 73.0
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 1.6e-52 209.5 128 80.5
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 1.6e-52 209.5 135 76.3
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 1.6e-52 209.5 132 75.8
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 3.7e-52 208.4 139 74.1
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 4.8e-52 208.0 135 74.8
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 8.2e-52 207.2 138 71.0
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 5.3e-51 204.5 141 68.8
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 3.4e-50 201.8 135 70.4
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 7.2e-48 194.1 137 70.1
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.0e-46 190.3 142 76.1
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 3.9e-46 188.3 140 68.6
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 8.8e-46 187.2 139 67.6
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 6.9e-43 177.6 164 59.1
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 6.9e-43 177.6 132 66.7
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 7.7e-42 174.1 114 75.4
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 4.7e-39 164.9 96 82.3
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 6.1e-39 164.5 132 59.1
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 7.9e-39 164.1 139 61.9
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 1.1e-37 160.2 96 80.2
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 3.3e-37 158.7 102 74.5
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 9.7e-37 157.1 131 64.1
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 9.7e-37 157.1 127 60.6
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.2e-36 156.0 157 56.7
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 6.3e-36 154.5 96 74.0
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 4.1e-35 151.8 101 74.3
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 2.9e-33 145.6 136 57.4
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 2.9e-33 145.6 99 67.7
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 1.5e-32 143.3 99 68.7
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 7.5e-29 131.0 142 55.6
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.8e-22 109.8 130 45.4
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 1.8e-22 109.8 139 45.3
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 3.4e-21 105.5 96 56.2
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.1e-19 100.5 95 52.6
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 3.5e-18 95.5 62 72.6
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 2.3e-17 92.8 117 43.6
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 3.8e-17 92.0 62 69.4
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 1.5e-16 90.1 68 66.2
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 1.6e-15 86.7 126 38.9
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 4.9e-12 75.1 43 81.4
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 6.3e-12 74.7 44 75.0
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 3.3e-08 62.4 39 74.4
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 7.3e-08 61.2 37 75.7
SEGI_40910 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 2.1e-07 59.7 45 57.8
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 6.1e-07 58.2 33 81.8


User provided reference genes

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