Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G0511 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.2e-112 408.3 190 100.0
FAN16G2762 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.4e-59 233.4 111 96.4
FvH4_3g35890 Fragaria vesca HOM05D000092 ORTHO05D000042 1.3e-47 193.7 137 69.3
FvH4_6g05393 Fragaria vesca HOM05D000092 ORTHO05D000042 2.4e-43 179.5 120 71.7
FAN14G4314 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.1e-42 176.4 120 70.8
FAN11G0546 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.6e-39 166.8 102 80.4
FvH4_3g35920 Fragaria vesca HOM05D000092 ORTHO05D000042 3.7e-39 165.6 102 83.3
FvH4_5g27640 Fragaria vesca HOM05D000092 ORTHO05D000042 1.1e-32 144.1 132 58.3
FAN18G1632 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.1e-32 144.1 132 58.3
FAN04G1123 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.6e-31 140.2 125 58.4
FAN27G1382 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.3e-24 115.5 75 77.3
RcHm_v2.0_Chr5g0079861 Rosa chinensis HOM05D000092 ORTHO05D000042 1.7e-15 87.0 111 42.3
FAN16G0956 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.4e-14 83.2 103 42.7
FvH4_3g35832 Fragaria vesca HOM05D000092 ORTHO05D000042 2.0e-13 80.1 109 39.4
RcHm_v2.0_Chr5g0069731 Rosa chinensis HOM05D000092 ORTHO05D000042 2.2e-12 76.6 106 42.5
FAN11G0410 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.5e-11 73.2 99 44.4
FvH4_7g06680 Fragaria vesca HOM05D000092 ORTHO05D000042 2.7e-10 69.7 140 34.3
FAN05G0791 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.7e-10 69.7 111 37.8
FAN01G1921 Fragaria x ananassa HOM05D000092 ORTHO05D004940 3.6e-10 69.3 107 43.9
RcHm_v2.0_Chr5g0079591 Rosa chinensis HOM05D000092 ORTHO05D000042 1.0e-09 67.8 112 38.4
FAN13G0568 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.4e-09 67.4 79 49.4
RcHm_v2.0_Chr5g0079791 Rosa chinensis HOM05D000092 ORTHO05D000042 1.8e-09 67.0 109 38.5
FvH4_7g13640 Fragaria vesca HOM05D000092 ORTHO05D000042 3.0e-09 66.2 109 41.3
Prupe.1G542800 Prunus persica HOM05D000092 ORTHO05D000042 6.7e-09 65.1 84 40.5
RcHm_v2.0_Chr5g0080241 Rosa chinensis HOM05D000092 ORTHO05D000042 6.7e-09 65.1 110 39.1
FAN21G2001 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.1e-08 64.3 132 35.6
MD15G1398400 Malus domestica HOM05D000092 ORTHO05D000042 1.1e-08 64.3 90 40.0
FvH4_3g35820 Fragaria vesca HOM05D000092 ORTHO05D000042 2.0e-08 63.5 104 38.5
FvH4_7g31510 Fragaria vesca HOM05D000092 ORTHO05D000042 2.6e-08 63.2 108 35.2
MD11G1019800 Malus domestica HOM05D000092 ORTHO05D000042 2.6e-08 63.2 105 36.2
RcHm_v2.0_Chr5g0080281 Rosa chinensis HOM05D000092 ORTHO05D000042 2.6e-08 63.2 99 39.4
FAN25G2124 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.3e-08 62.8 104 38.5
RcHm_v2.0_Chr5g0064111 Rosa chinensis HOM05D000092 ORTHO05D000042 3.3e-08 62.8 104 37.5
FAN03G0673 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.4e-08 62.4 111 41.4
FAN06G3441 Fragaria x ananassa HOM05D004612 ORTHO05D004940 4.4e-08 62.4 109 39.4
RcHm_v2.0_Chr5g0079811 Rosa chinensis HOM05D000092 ORTHO05D000042 4.4e-08 62.4 110 37.3
RcHm_v2.0_Chr5g0061291 Rosa chinensis HOM05D000092 ORTHO05D000042 1.3e-07 60.8 105 38.1
MD11G1020500 Malus domestica HOM05D000092 ORTHO05D000042 1.7e-07 60.5 105 37.1
RcHm_v2.0_Chr5g0080371 Rosa chinensis HOM05D000092 ORTHO05D000042 2.2e-07 60.1 119 36.1
QL11p008844 Quercus lobata HOM05D000092 ORTHO05D000042 8.2e-07 58.2 104 32.7
FAN25G2738 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.1e-06 57.8 105 33.3
FAN11G3840 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.4e-06 57.4 110 30.9
FAN16G1230 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.4e-06 57.4 106 33.0
FvH4_6g52372 Fragaria vesca HOM05D000092 ORTHO05D000042 1.8e-06 57.0 111 34.2
RcHm_v2.0_Chr5g0079881 Rosa chinensis HOM05D000092 ORTHO05D000042 1.8e-06 57.0 105 37.1
RcHm_v2.0_Chr3g0483491 Rosa chinensis HOM05D000092 ORTHO05D000042 3.1e-06 56.2 109 32.1
FvH4_3g44000 Fragaria vesca HOM05D000759 ORTHO05D000574 4.1e-06 55.8 105 31.4
FAN06G1975 Fragaria x ananassa HOM05D000092 ORTHO05D035911 4.1e-06 55.8 72 44.4
FAN25G3051 Fragaria x ananassa HOM05D000759 ORTHO05D000574 4.1e-06 55.8 105 31.4
RcHm_v2.0_Chr5g0078301 Rosa chinensis HOM05D000092 ORTHO05D000042 4.1e-06 55.8 91 36.3
RcHm_v2.0_Chr7g0212741 Rosa chinensis HOM05D000092 ORTHO05D035911 5.3e-06 55.5 97 38.1
FvH4_3g43650 Fragaria vesca HOM05D000092 ORTHO05D000042 7.0e-06 55.1 92 35.9
FvH4_3g45680 Fragaria vesca HOM05D000092 ORTHO05D000042 7.0e-06 55.1 110 35.5
FvH4_3g45720 Fragaria vesca HOM05D000092 ORTHO05D000042 7.0e-06 55.1 110 35.5
FAN11G2559 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.0e-06 55.1 108 34.3
FAN17G0425 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.0e-06 55.1 105 34.3
CSS0037676 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D003282 9.1e-06 54.7 72 38.9
FvH4_3g38670 Fragaria vesca HOM05D000092 ORTHO05D000042 9.1e-06 54.7 111 28.8


User provided reference genes

Program Settings