Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 9.9e-267 922.9 480 100.0
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.6e-248 860.9 489 93.9
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 8.1e-245 850.1 488 92.2
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.4e-225 786.2 502 86.1
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 3.4e-198 695.3 458 82.3
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 6.6e-154 548.1 331 91.8
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 8.7e-122 441.4 462 59.5
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 1.9e-92 344.0 402 56.0
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 1.8e-79 300.8 475 46.9
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 2.5e-76 290.4 462 46.3
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 5.5e-76 289.3 457 45.7
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 1.0e-74 285.0 424 46.5
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 5.4e-71 272.7 467 45.0
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 1.1e-68 265.0 417 46.3
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 1.6e-67 261.2 460 42.6
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 1.0e-66 258.5 384 47.1
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 3.0e-66 256.9 455 42.6
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 4.0e-66 256.5 456 43.2
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 9.8e-65 251.9 451 42.6
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 3.2e-63 246.9 496 38.9
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 1.5e-60 238.0 437 41.0
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 2.5e-60 237.3 470 40.2
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 2.3e-58 230.7 455 40.2
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 6.8e-58 229.2 478 38.9
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 6.8e-58 229.2 456 40.4
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 5.8e-57 226.1 358 45.0
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 1.9e-55 221.1 489 37.8
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 4.1e-55 219.9 433 40.4
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 1.6e-54 218.0 403 41.7
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 2.0e-54 217.6 477 38.6
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 3.5e-54 216.9 453 38.9
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 3.5e-54 216.9 421 40.4
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 6.0e-54 216.1 441 40.4
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 5.6e-52 209.5 527 38.0
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 3.1e-50 203.8 433 39.7
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.3e-48 198.4 345 41.7
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 2.3e-45 187.6 373 43.2
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 4.0e-42 176.8 444 35.1
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 4.4e-41 173.3 465 32.9
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 9.9e-41 172.2 384 36.7
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 8.4e-40 169.1 443 36.1
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 1.1e-39 168.7 446 37.4
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 1.1e-36 158.7 357 37.8
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 5.6e-36 156.4 421 37.5
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 9.6e-36 155.6 481 33.3
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.2e-33 148.7 374 36.4
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 3.8e-32 143.7 373 33.8
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.4e-31 141.0 352 36.6
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 3.5e-30 137.1 262 38.2
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 7.8e-30 136.0 384 32.6
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 1.3e-29 135.2 390 34.6
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.7e-29 134.8 412 34.0
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 2.3e-29 134.4 391 36.3
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 5.1e-29 133.3 317 35.3
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 8.7e-29 132.5 479 31.1
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 8.7e-29 132.5 327 34.6
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 8.7e-29 132.5 484 31.8
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 7.3e-28 129.4 301 35.9
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 3.6e-27 127.1 429 34.5
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.8e-26 124.8 378 33.9
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 3.4e-25 120.6 249 37.3
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 4.4e-25 120.2 374 31.8
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 5.8e-25 119.8 466 29.8
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 4.2e-23 113.6 445 29.7
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 7.1e-23 112.8 287 37.3
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 1.6e-22 111.7 464 26.9
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 1.6e-22 111.7 553 27.7
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 1.0e-21 109.0 302 35.4
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.3e-21 108.6 480 27.7
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 3.9e-21 107.1 393 31.8
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 1.1e-20 105.5 449 28.1
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 8.1e-19 99.4 439 28.5
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 3.2e-15 87.4 350 31.7
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 3.2e-15 87.4 350 31.7
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 1.3e-13 82.0 338 29.0
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 1.8e-13 81.6 95 46.3
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 1.5e-12 78.6 418 28.7
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 2.8e-11 74.3 431 24.4
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 2.1e-06 58.2 167 31.7


User provided reference genes

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