Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G0416 Fragaria x ananassa HOM05D000535 ORTHO05D000427 2.2e-97 359.0 182 100.0
FvH4_3g17790 Fragaria vesca HOM05D000535 ORTHO05D000427 2.0e-87 325.9 210 82.4
FAN16G1979 Fragaria x ananassa HOM05D002452 ORTHO05D006585 5.0e-86 321.2 210 81.4
FAN25G2042 Fragaria x ananassa HOM05D000535 ORTHO05D000427 1.5e-82 309.7 197 83.2
MD11G1269400 Malus domestica HOM05D000535 ORTHO05D000427 1.0e-30 137.5 195 44.1
Prupe.4G155200 Prunus persica HOM05D000535 ORTHO05D000427 2.3e-30 136.3 213 45.5
RcHm_v2.0_Chr5g0029081 Rosa chinensis HOM05D000535 ORTHO05D000427 4.3e-29 132.1 207 44.4
FAN25G3174 Fragaria x ananassa HOM05D000535 ORTHO05D000427 1.2e-28 130.6 211 45.0
Haze_08461 Corylus avellana HOM05D000535 ORTHO05D000427 1.6e-28 130.2 201 40.3
MD03G1251400 Malus domestica HOM05D000535 ORTHO05D000427 1.6e-28 130.2 210 43.3
FvH4_3g17480 Fragaria vesca HOM05D000535 ORTHO05D000427 2.8e-28 129.4 211 44.5
FAN11G0650 Fragaria x ananassa HOM05D000535 ORTHO05D000427 2.8e-28 129.4 211 44.5
FAN16G2271 Fragaria x ananassa HOM05D000535 ORTHO05D000427 2.8e-28 129.4 211 44.5
Cfa019506 Carpinus fangiana HOM05D000535 ORTHO05D000427 4.7e-28 128.6 201 42.3
FAN16G2894 Fragaria x ananassa HOM05D000535 ORTHO05D000427 5.2e-27 125.2 212 44.3
RcHm_v2.0_Chr5g0029031 Rosa chinensis HOM05D000535 ORTHO05D000427 6.9e-27 124.8 204 43.1
FAN11G2490 Fragaria x ananassa HOM05D000535 ORTHO05D000427 1.2e-26 124.0 212 44.3
CiPaw.11G155000 Carya illinoinensis HOM05D000535 ORTHO05D000427 2.2e-25 119.8 187 41.2
MD11G1269300 Malus domestica HOM05D000535 ORTHO05D000427 2.9e-25 119.4 211 38.9
CiPaw.11G155200 Carya illinoinensis HOM05D000535 ORTHO05D000427 5.4e-24 115.2 207 40.1
QL09p011643 Quercus lobata HOM05D000535 ORTHO05D000427 5.4e-24 115.2 202 39.1
Haze_08460 Corylus avellana HOM05D000535 ORTHO05D000427 1.6e-23 113.6 208 38.0
QL09p011629 Quercus lobata HOM05D000535 ORTHO05D000427 1.6e-23 113.6 202 38.6
QL09p011635 Quercus lobata HOM05D000535 ORTHO05D000427 2.7e-23 112.8 202 37.6
QL09p011651 Quercus lobata HOM05D000535 ORTHO05D000427 2.3e-22 109.8 202 36.6
CiPaw.11G155100 Carya illinoinensis HOM05D000535 ORTHO05D000427 3.0e-22 109.4 197 37.6
CiPaw.11G154900 Carya illinoinensis HOM05D000535 ORTHO05D000427 8.7e-22 107.8 197 37.6
QL09p011646 Quercus lobata HOM05D000535 ORTHO05D000427 2.1e-20 103.2 149 38.3
FAN25G2191 Fragaria x ananassa HOM05D000535 ORTHO05D000427 4.8e-20 102.1 167 43.7
CANSAT56G0194 Cannabis sativa HOM05D000535 ORTHO05D000427 8.1e-20 101.3 176 40.9
Glyma.12G234800 Glycine max HOM05D000535 ORTHO05D000427 4.0e-19 99.0 205 35.6
Manes.01G126000 Manihot esculenta HOM05D000535 ORTHO05D000427 6.9e-19 98.2 191 35.6
Manes.01G126100 Manihot esculenta HOM05D000535 ORTHO05D000427 6.9e-19 98.2 199 35.7
Medtr2g073010 Medicago truncatula HOM05D000535 ORTHO05D000427 1.2e-18 97.4 197 35.0
Psat1g007640 Pisum sativum HOM05D000535 ORTHO05D000427 4.5e-18 95.5 194 36.1
Ca_03923_v3 Cicer arietinum L. HOM05D000535 ORTHO05D000427 7.6e-18 94.7 196 36.2
Ciclev10016767m.g Citrus clementina HOM05D000535 ORTHO05D000427 4.9e-17 92.0 191 33.5
TAR371G0845 Trochodendron aralioides HOM05D000535 ORTHO05D000427 4.9e-17 92.0 212 34.4
Lalb_Chr19g0133691 Lupinus albus HOM05D000535 ORTHO05D000427 6.4e-17 91.7 132 41.7
Sed0025983 Sechium edule HOM05D000535 ORTHO05D000427 6.4e-17 91.7 129 40.3
CANSAT56G4212 Cannabis sativa HOM05D000535 ORTHO05D000427 1.4e-16 90.5 206 34.5
TPR.G35003 Trifolium pratense HOM05D000535 ORTHO05D000427 1.9e-16 90.1 188 35.6
Potri.004G000400 Populus trichocarpa HOM05D000535 ORTHO05D000427 2.4e-16 89.7 181 34.8
Cfa019505 Carpinus fangiana HOM05D000535 ORTHO05D000427 4.2e-16 89.0 204 30.9
arahy.Tifrunner.gnm1.ann1.1J64TJ Arachis hypogaea HOM05D000535 ORTHO05D000427 5.4e-16 88.6 199 33.7
Lj3g0004853 Lotus japonicus HOM05D000535 ORTHO05D000427 7.1e-16 88.2 150 36.7
Manes.02G083500 Manihot esculenta HOM05D000535 ORTHO05D000427 1.2e-15 87.4 119 42.0
Potri.001G309900 Populus trichocarpa HOM05D000535 ORTHO05D000427 1.2e-15 87.4 199 33.7
ClCG02G016000 Citrullus lanatus HOM05D000535 ORTHO05D000427 2.1e-15 86.7 129 37.2
Manes.01G126300 Manihot esculenta HOM05D000535 ORTHO05D000427 2.1e-15 86.7 107 46.7
arahy.Tifrunner.gnm1.ann1.1T55P5 Arachis hypogaea HOM05D000535 ORTHO05D000427 3.5e-15 85.9 199 33.2
ClCG02G015990 Citrullus lanatus HOM05D000535 ORTHO05D000427 1.0e-14 84.3 115 39.1
Potri.007G111600 Populus trichocarpa HOM05D000535 ORTHO05D000427 1.0e-14 84.3 141 38.3
PGR142G1324 Punica granatum HOM05D000535 ORTHO05D000427 1.8e-14 83.6 196 31.1
Potri.019G006900 Populus trichocarpa HOM05D000535 ORTHO05D000427 6.7e-14 81.6 204 33.8
Sed0013324 Sechium edule HOM05D000535 ORTHO05D000427 6.7e-14 81.6 190 28.9
CsaV3_2G005020 Cucumis sativus L. HOM05D000535 ORTHO05D000427 2.5e-13 79.7 129 35.7
arahy.Tifrunner.gnm1.ann1.RXWH3W Arachis hypogaea HOM05D000535 ORTHO05D000427 4.3e-13 79.0 202 33.2
Sabra16G0195700 Salix brachista HOM05D000535 ORTHO05D000427 4.3e-13 79.0 198 31.3
Sabra19G0017900 Salix brachista HOM05D000535 ORTHO05D000427 4.3e-13 79.0 164 33.5
Sabra19G0024200 Salix brachista HOM05D000535 ORTHO05D000427 4.3e-13 79.0 164 33.5
Aqoxy6G01729 Aquilegia oxysepala HOM05D000535 ORTHO05D000427 5.6e-13 78.6 182 36.3
Sabra19G0018000 Salix brachista HOM05D000535 ORTHO05D000427 5.6e-13 78.6 125 36.8
Sabra19G0024100 Salix brachista HOM05D000535 ORTHO05D000427 1.6e-12 77.0 125 36.0
Lalb_Chr03g0031361 Lupinus albus HOM05D000535 ORTHO05D000427 2.1e-12 76.6 187 33.7
Sabra07G0091600 Salix brachista HOM05D000535 ORTHO05D000427 2.8e-12 76.3 129 38.8
ClCG02G016010 Citrullus lanatus HOM05D000535 ORTHO05D000427 8.1e-12 74.7 159 32.7
Glyma.08G235300 Glycine max HOM05D000535 ORTHO05D000427 1.4e-11 73.9 158 36.1
TPR.G34999 Trifolium pratense HOM05D000535 ORTHO05D000427 1.8e-11 73.6 135 35.6
Psat1g008000 Pisum sativum HOM05D000535 ORTHO05D000427 2.4e-11 73.2 123 36.6
CsaV3_2G005010 Cucumis sativus L. HOM05D000535 ORTHO05D000427 3.1e-11 72.8 175 29.7
Potri.007G111700 Populus trichocarpa HOM05D000535 ORTHO05D000427 3.1e-11 72.8 129 36.4
Medtr2g072980 Medicago truncatula HOM05D000535 ORTHO05D000427 6.9e-11 71.6 126 34.9
MELO3C004296.2 Cucumis melo HOM05D000535 ORTHO05D000427 1.2e-10 70.9 155 34.2
Sabra07G0091500 Salix brachista HOM05D000535 ORTHO05D000427 1.5e-10 70.5 140 34.3
Glyma.15G211500 Glycine max HOM05D000535 ORTHO05D000427 2.0e-10 70.1 160 34.4
Manes.01G126400 Manihot esculenta HOM05D000535 ORTHO05D000427 2.6e-10 69.7 163 33.1
Potri.007G111500 Populus trichocarpa HOM05D000535 ORTHO05D000427 2.6e-10 69.7 131 36.6
Potri.007G111800 Populus trichocarpa HOM05D000535 ORTHO05D000427 2.6e-10 69.7 131 35.9
Glyma.08G235400 Glycine max HOM05D000535 ORTHO05D000427 7.6e-10 68.2 206 31.1
Phvul.011G166500 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 1.3e-09 67.4 207 32.9
VMungo1127G0967 Vigna mungo HOM05D000535 ORTHO05D000427 2.2e-09 66.6 158 35.4
CANSAT56G4213 Cannabis sativa HOM05D000535 ORTHO05D000427 2.9e-09 66.2 100 43.0
Phvul.011G169900 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 2.9e-09 66.2 207 32.4
Gohir.A05G392100 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.1e-08 64.3 124 35.5
Lju170C15T10 Lonicera japonica HOM05D000535 ORTHO05D000427 1.1e-08 64.3 110 35.5
TPR.G16475 Trifolium pratense HOM05D000535 ORTHO05D000427 1.4e-08 63.9 196 27.0
GSVIVG01012922001 Vitis vinifera HOM05D000535 ORTHO05D000427 1.4e-08 63.9 101 38.6
Gohir.D04G025000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.9e-08 63.5 124 35.5
Gorai.012G027600 Gossypium raimondii HOM05D000535 ORTHO05D000427 1.9e-08 63.5 124 35.5
Sc14g0008200 Simmondsia chinensis HOM05D000535 ORTHO05D000427 1.9e-08 63.5 112 34.8
GSVIVG01012920001 Vitis vinifera HOM05D000535 ORTHO05D000427 1.9e-08 63.5 127 33.9
Ca_24100_v3 Cicer arietinum L. HOM05D000535 ORTHO05D000427 2.4e-08 63.2 203 28.1
MELO3C000887.2 Cucumis melo HOM05D000535 ORTHO05D000427 2.4e-08 63.2 71 46.5
Medtr8g059790 Medicago truncatula HOM05D000535 ORTHO05D000427 3.2e-08 62.8 204 26.5
TPR.G17980 Trifolium pratense HOM05D000535 ORTHO05D000427 3.2e-08 62.8 195 27.7
Dinv04609 Davidia involucrata HOM05D000535 ORTHO05D000427 4.2e-08 62.4 127 38.6
Phvul.011G169800 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 4.2e-08 62.4 205 30.2
Medtr8g060550 Medicago truncatula HOM05D000535 ORTHO05D000427 5.5e-08 62.0 201 27.9
Medtr8g461690 Medicago truncatula HOM05D000535 ORTHO05D000427 5.5e-08 62.0 201 27.9
Lju170C17T0 Lonicera japonica HOM05D000535 ORTHO05D000427 7.1e-08 61.6 92 39.1
Lju170C19T1 Lonicera japonica HOM05D000535 ORTHO05D000427 7.1e-08 61.6 110 35.5
Lj9C411T7 Lonicera japonica HOM05D000535 ORTHO05D000427 9.3e-08 61.2 117 34.2
Lju170C20T6 Lonicera japonica HOM05D000535 ORTHO05D000427 9.3e-08 61.2 93 37.6
Medtr0100s0150 Medicago truncatula HOM05D000535 ORTHO05D000427 9.3e-08 61.2 196 27.0
GSVIVG01012936001 Vitis vinifera HOM05D000535 ORTHO05D000427 1.2e-07 60.8 101 38.6
Duzib128G0529 Durio zibethinus HOM05D000535 ORTHO05D000427 1.6e-07 60.5 109 36.7
Lju170C18T0 Lonicera japonica HOM05D000535 ORTHO05D000427 2.1e-07 60.1 93 37.6
COL.COLO4_08721 Corchorus olitorius HOM05D000535 ORTHO05D000427 2.7e-07 59.7 132 31.8
Medtr3g014820 Medicago truncatula HOM05D000535 ORTHO05D000427 3.5e-07 59.3 206 27.7
Medtr3g014870 Medicago truncatula HOM05D000535 ORTHO05D000427 3.5e-07 59.3 198 27.3
Thecc.05G197900 Theobroma cacao HOM05D000535 ORTHO05D000427 3.5e-07 59.3 112 35.7
Duzib128G1043 Durio zibethinus HOM05D000535 ORTHO05D000427 4.6e-07 58.9 119 35.3
Hma1.2p1_0135F.1_g061615 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 6.0e-07 58.5 177 28.8
Hma1.2p1_0135F.1_g061660 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 6.0e-07 58.5 177 28.8
Hma1.2p1_1624F.1_g294266 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 6.0e-07 58.5 177 28.8
Dinv04608 Davidia involucrata HOM05D000535 ORTHO05D000427 7.9e-07 58.2 93 37.6
Gohir.A05G392000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 7.9e-07 58.2 116 32.8
Gohir.D04G025100 Gossypium hirsutum HOM05D000535 ORTHO05D000427 7.9e-07 58.2 116 32.8
Gorai.012G027700 Gossypium raimondii HOM05D000535 ORTHO05D000427 7.9e-07 58.2 116 32.8
Medtr0211s0080 Medicago truncatula HOM05D000535 ORTHO05D000427 7.9e-07 58.2 197 27.4
Medtr8g461050 Medicago truncatula HOM05D000535 ORTHO05D000427 7.9e-07 58.2 204 26.5
Psat4g138880 Pisum sativum HOM05D000535 ORTHO05D000427 7.9e-07 58.2 193 29.5
Psat4g138920 Pisum sativum HOM05D000535 ORTHO05D000427 7.9e-07 58.2 176 31.8
CAN.G861.36 Capsicum annuum HOM05D000535 ORTHO05D000427 1.0e-06 57.8 92 38.0
Solyc03g098670.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 1.0e-06 57.8 106 33.0
Thecc.05G198000 Theobroma cacao HOM05D000535 ORTHO05D000427 1.0e-06 57.8 105 37.1
CSS0047130 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 1.3e-06 57.4 111 38.7
Migut.O00272 Erythranthe guttata HOM05D000535 ORTHO05D000427 1.3e-06 57.4 119 35.3
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 1.3e-06 57.4 116 37.1
PGSC0003DMG400010149 Solanum tuberosum HOM05D000535 ORTHO05D000427 1.3e-06 57.4 106 34.0
vmacro18604 Vaccinium macrocarpon HOM05D000535 ORTHO05D000427 1.3e-06 57.4 196 30.6
Prupe.5G074400 Prunus persica HOM05D000535 ORTHO05D000427 1.8e-06 57.0 94 39.4
TPR.G6098 Trifolium pratense HOM05D000535 ORTHO05D000427 1.8e-06 57.0 177 27.7
FAN25G1043 Fragaria x ananassa HOM05D000535 ORTHO05D000427 2.3e-06 56.6 141 36.2
Lsat_1_v5_gn_4_23340 Lactuca sativa HOM05D000535 ORTHO05D000427 2.3e-06 56.6 113 31.0
Medtr0084s0030 Medicago truncatula HOM05D000535 ORTHO05D000427 2.3e-06 56.6 196 25.5
Sc14g0008170 Simmondsia chinensis HOM05D000535 ORTHO05D000427 2.3e-06 56.6 121 33.9
VMungo0464G1147 Vigna mungo HOM05D000535 ORTHO05D000427 2.3e-06 56.6 107 33.6
Hma1.2p1_1624F.1_g294263 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 3.0e-06 56.2 124 33.1
Hma1.2p1_1624F.1_g294280 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 3.0e-06 56.2 124 33.1
Phvul.004G138500 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 3.0e-06 56.2 94 35.1
Prupe.5G074500 Prunus persica HOM05D000535 ORTHO05D000427 3.0e-06 56.2 94 40.4
QL10p033926 Quercus lobata HOM05D000535 ORTHO05D000427 3.0e-06 56.2 92 37.0
CSS0015346 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 5.1e-06 55.5 110 37.3
Lj2g0010766 Lotus japonicus HOM05D000535 ORTHO05D000427 5.1e-06 55.5 89 40.4
Oeu057516.1 Olea europaea HOM05D000535 ORTHO05D000427 5.1e-06 55.5 121 34.7
Cc04_g08330 Coffea canephora HOM05D000535 ORTHO05D000427 6.7e-06 55.1 100 35.0
Sed0020580 Sechium edule HOM05D000535 ORTHO05D000427 6.7e-06 55.1 108 32.4
Solyc03g020010.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 6.7e-06 55.1 92 35.9
Sopen03g029620 Solanum pennellii HOM05D000535 ORTHO05D000427 6.7e-06 55.1 92 35.9
Glyma.09G163900 Glycine max HOM05D000535 ORTHO05D000427 8.7e-06 54.7 112 33.0
Potri.017G153600 Populus trichocarpa HOM05D000535 ORTHO05D000427 8.7e-06 54.7 92 34.8


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