Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 3.5e-76 288.1 138 100.0
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.1e-74 283.1 138 98.6
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 2.8e-73 278.5 138 97.1
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 5.9e-63 244.2 138 82.6
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 2.4e-48 195.7 135 66.7
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 2.9e-46 188.7 135 68.9
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 1.2e-44 183.3 133 66.2
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 3.6e-44 181.8 133 65.4
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 4.7e-44 181.4 134 66.4
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 1.4e-43 179.9 132 65.2
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 1.4e-43 179.9 133 64.7
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 3.4e-42 175.3 133 59.4
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 3.4e-42 175.3 133 63.2
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 4.4e-42 174.9 133 63.2
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 5.7e-42 174.5 136 61.8
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 7.5e-42 174.1 133 61.7
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 7.5e-42 174.1 134 59.7
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 9.8e-42 173.7 133 61.7
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 1.7e-41 172.9 135 63.0
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 2.2e-41 172.6 140 60.0
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 2.8e-41 172.2 134 60.4
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 3.7e-41 171.8 134 61.2
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 4.8e-41 171.4 137 58.4
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 8.3e-41 170.6 135 59.3
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 1.1e-40 170.2 133 57.9
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 1.8e-40 169.5 138 59.4
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 2.4e-40 169.1 138 58.0
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 3.1e-40 168.7 138 60.9
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 4.1e-40 168.3 139 61.2
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 4.1e-40 168.3 134 60.4
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 4.1e-40 168.3 132 62.1
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 4.1e-40 168.3 136 58.8
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 5.4e-40 167.9 137 61.3
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 5.4e-40 167.9 128 64.1
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 7.0e-40 167.5 134 59.0
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 1.2e-39 166.8 133 59.4
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 1.6e-39 166.4 127 61.4
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 2.0e-39 166.0 134 58.2
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 2.0e-39 166.0 140 59.3
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 2.0e-39 166.0 133 56.4
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 2.0e-39 166.0 134 56.7
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 3.5e-39 165.2 133 57.1
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 7.7e-39 164.1 142 57.0
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 7.7e-39 164.1 136 57.4
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.7e-38 162.9 135 57.8
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 2.2e-38 162.5 135 56.3
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 2.9e-38 162.2 128 61.7
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 3.8e-38 161.8 143 58.0
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 5.0e-38 161.4 134 58.2
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 5.0e-38 161.4 134 58.2
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.1e-37 160.2 137 54.7
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 1.9e-37 159.5 134 56.7
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 1.9e-37 159.5 134 56.7
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 1.9e-37 159.5 134 56.7
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 1.9e-37 159.5 134 54.5
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 3.2e-37 158.7 138 56.5
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 7.2e-37 157.5 133 59.4
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 9.4e-37 157.1 134 56.0
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 9.4e-37 157.1 141 53.9
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 1.6e-36 156.4 129 59.7
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 1.6e-36 156.4 135 57.0
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 2.1e-36 156.0 133 59.4
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 1.0e-35 153.7 169 48.5
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 1.4e-35 153.3 143 52.4
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 1.8e-35 152.9 137 54.0
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 5.2e-35 151.4 138 53.6
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 6.8e-35 151.0 146 48.6
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 6.8e-35 151.0 138 55.1
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 8.8e-35 150.6 133 58.6
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 9.8e-34 147.1 138 54.3
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 1.3e-33 146.7 138 53.6
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 1.3e-33 146.7 138 53.6
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 2.2e-33 146.0 138 52.9
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 4.9e-33 144.8 155 49.0
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 1.4e-32 143.3 138 52.9
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 5.4e-32 141.4 132 54.5
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 2.9e-30 135.6 127 53.5
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 3.8e-30 135.2 127 53.5
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 1.1e-29 133.7 102 60.8
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 3.6e-28 128.6 95 60.0
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.8e-27 126.3 99 57.6
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.7e-25 119.8 141 44.7
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.7e-25 119.8 141 44.7
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 4.9e-25 118.2 100 57.0
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 4.9e-25 118.2 123 49.6
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 1.6e-23 113.2 140 44.3
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 2.0e-23 112.8 138 48.6
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 2.7e-23 112.5 134 45.5
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 3.5e-23 112.1 119 52.1
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.0e-22 110.5 99 56.6
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.5e-21 106.7 93 54.8
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 1.5e-21 106.7 140 43.6
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 1.9e-21 106.3 88 52.3
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 1.2e-20 103.6 100 57.0
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 8.0e-20 100.9 92 54.3
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 1.8e-19 99.8 149 41.6
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 2.9e-17 92.4 80 61.2
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 3.7e-17 92.0 122 41.8
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 8.3e-17 90.9 87 48.3
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 1.4e-16 90.1 81 53.1
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 1.1e-13 80.5 79 51.9
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 7.3e-13 77.8 101 44.6
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 4.4e-10 68.6 81 49.4
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 4.9e-09 65.1 95 40.0
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 4.1e-08 62.0 126 35.7
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 4.6e-07 58.5 66 47.0


User provided reference genes

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