Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.6e-101 372.1 195 100.0
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 2.5e-91 339.0 195 91.3
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 1.6e-90 336.3 195 89.2
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.7e-90 335.5 195 90.3
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 8.3e-79 297.4 160 95.0
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 9.1e-78 293.9 195 76.4
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 4.4e-72 275.0 197 75.1
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 9.5e-67 257.3 197 70.6
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 1.8e-62 243.0 207 67.6
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 1.2e-61 240.4 196 66.8
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 3.5e-61 238.8 200 67.5
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 5.9e-61 238.0 155 76.8
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 1.0e-60 237.3 200 68.0
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.3e-60 236.9 145 88.3
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 3.0e-60 235.7 198 66.2
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 8.6e-60 234.2 200 65.5
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 8.6e-60 234.2 198 65.7
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 1.5e-59 233.4 136 84.6
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 1.5e-59 233.4 200 63.5
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 1.9e-59 233.0 199 66.3
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 3.3e-59 232.3 201 63.7
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 4.3e-59 231.9 200 66.0
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 5.6e-59 231.5 196 65.8
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 5.6e-59 231.5 202 64.9
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 1.2e-58 230.3 192 68.8
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 1.6e-58 229.9 137 81.8
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.8e-58 229.2 153 76.5
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 2.8e-58 229.2 154 73.4
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 3.6e-58 228.8 204 62.7
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 4.7e-58 228.4 196 65.3
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 6.2e-58 228.0 201 65.2
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 6.2e-58 228.0 153 75.8
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 8.0e-58 227.6 200 64.0
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 1.4e-57 226.9 204 65.2
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 1.4e-57 226.9 208 63.0
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 1.8e-57 226.5 202 64.9
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 1.8e-57 226.5 153 75.2
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 4.0e-57 225.3 203 64.5
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 4.0e-57 225.3 201 63.7
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 5.2e-57 224.9 160 73.8
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 5.2e-57 224.9 202 64.4
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 8.9e-57 224.2 203 63.5
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 1.2e-56 223.8 213 61.0
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 1.5e-56 223.4 173 68.8
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 4.4e-56 221.9 192 65.1
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 7.5e-56 221.1 202 61.9
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 1.3e-55 220.3 151 74.2
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 2.2e-55 219.5 120 89.2
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 2.9e-55 219.2 143 76.9
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 2.9e-55 219.2 122 86.9
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 4.9e-55 218.4 123 85.4
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 4.9e-55 218.4 197 61.9
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 6.4e-55 218.0 123 85.4
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 1.1e-54 217.2 137 80.3
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 1.4e-54 216.9 122 86.9
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 2.4e-54 216.1 123 83.7
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 2.4e-54 216.1 134 81.3
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 3.2e-54 215.7 122 83.6
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 4.1e-54 215.3 133 78.9
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 4.1e-54 215.3 160 71.2
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 5.4e-54 214.9 145 77.9
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 9.2e-54 214.2 123 83.7
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 9.2e-54 214.2 149 71.8
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 1.2e-53 213.8 123 82.9
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 1.2e-53 213.8 140 77.1
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 1.2e-53 213.8 178 63.5
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 1.6e-53 213.4 138 76.8
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 2.0e-53 213.0 170 66.5
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 2.0e-53 213.0 196 63.3
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 4.6e-53 211.8 143 73.4
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 7.8e-53 211.1 122 81.1
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 7.8e-53 211.1 194 61.3
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 7.8e-53 211.1 123 81.3
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 7.8e-53 211.1 123 82.9
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 7.8e-53 211.1 122 83.6
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 1.0e-52 210.7 158 70.3
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 1.0e-52 210.7 159 68.6
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 1.3e-52 210.3 177 61.0
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 1.3e-52 210.3 177 61.0
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 2.3e-52 209.5 145 74.5
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 3.0e-52 209.1 199 57.8
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 3.9e-52 208.8 187 60.4
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 6.6e-52 208.0 136 74.3
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 8.6e-52 207.6 199 58.3
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.1e-51 207.2 134 74.6
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 1.1e-51 207.2 138 74.6
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 1.9e-51 206.5 194 61.3
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 2.5e-51 206.1 191 61.8
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 4.3e-51 205.3 188 60.6
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 7.3e-51 204.5 143 72.7
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 8.1e-50 201.1 136 68.4
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 1.1e-49 200.7 192 58.9
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 8.9e-49 197.6 126 75.4
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 8.9e-49 197.6 188 61.2
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 3.4e-48 195.7 192 55.7
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 4.4e-48 195.3 194 56.7
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 7.1e-46 188.0 130 67.7
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 3.5e-45 185.7 210 55.2
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 6.0e-45 184.9 122 72.1
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 1.5e-43 180.3 197 55.8
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 5.6e-43 178.3 99 87.9
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 7.3e-43 177.9 127 66.1
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 1.6e-42 176.8 127 65.4
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.8e-42 176.0 124 64.5
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 1.0e-36 157.5 153 61.4
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 1.7e-36 156.8 106 67.9
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 1.6e-34 150.2 115 69.6
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 3.6e-34 149.1 158 57.6
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 6.0e-29 131.7 236 41.9
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.4e-25 120.6 132 52.3
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 4.0e-25 119.0 121 53.7
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 1.9e-19 100.1 71 69.0
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 4.3e-19 99.0 121 45.5
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 6.9e-17 91.7 152 42.8
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.3e-15 87.4 45 86.7
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.4e-14 84.0 58 72.4
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.2e-14 82.8 103 48.5
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.0e-12 77.8 98 48.0
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.0e-12 77.8 98 48.0
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 5.1e-12 75.5 114 43.9
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 8.7e-12 74.7 37 91.9
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 8.4e-07 58.2 52 55.8
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.5e-06 56.6 42 57.1


User provided reference genes

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