Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G0178 Fragaria x ananassa HOM05D007941 ORTHO05D010050 2.1e-135 485.7 247 100.0
FAN25G1443 Fragaria x ananassa HOM05D007941 ORTHO05D010050 7.7e-106 387.5 216 94.0
FvH4_3g02100 Fragaria vesca HOM05D007941 ORTHO05D010050 8.3e-76 287.7 158 96.8
RcHm_v2.0_Chr5g0003191 Rosa chinensis HOM05D007941 ORTHO05D010050 2.4e-67 259.6 181 79.0
Prupe.4G021200 Prunus persica HOM05D007941 ORTHO05D010050 1.9e-48 196.8 180 64.4
MD05G1345700 Malus domestica HOM05D007941 ORTHO05D010050 3.6e-47 192.6 182 64.8
Haze_06797 Corylus avellana HOM05D007941 ORTHO05D010050 7.1e-43 178.3 181 60.8
Cfa000224 Carpinus fangiana HOM05D007941 ORTHO05D010050 9.6e-40 167.9 161 61.5
Manes.16G007400 Manihot esculenta HOM05D007941 ORTHO05D010050 1.9e-35 153.7 172 54.1
CANSAT56G1781 Cannabis sativa HOM05D007941 ORTHO05D010050 3.2e-35 152.9 162 58.0
QL05p073215 Quercus lobata HOM05D007941 ORTHO05D010050 1.2e-34 151.0 163 54.0
MD10G1321100 Malus domestica HOM05D007941 ORTHO05D010050 1.0e-33 147.9 183 54.1
Thecc.06G220000 Theobroma cacao HOM05D007941 ORTHO05D010050 8.7e-33 144.8 186 51.6
Dinv20048 Davidia involucrata HOM05D007941 ORTHO05D010050 9.6e-32 141.4 180 51.7
TWI38G0160 Tripterygium wilfordii HOM05D007941 ORTHO05D010050 3.1e-30 136.3 173 50.3
COL.COLO4_31770 Corchorus olitorius HOM05D007941 ORTHO05D010050 4.9e-28 129.0 188 48.4
TAR627G0026 Trochodendron aralioides HOM05D007941 ORTHO05D010050 1.1e-27 127.9 170 48.8
Potri.004G015401 Populus trichocarpa HOM05D007941 ORTHO05D010050 1.4e-27 127.5 182 47.3
Gohir.D10G012450 Gossypium hirsutum HOM05D007941 ORTHO05D010050 5.5e-27 125.6 178 49.4
Ciclev10017854m.g Citrus clementina HOM05D007941 ORTHO05D010050 7.1e-27 125.2 177 49.2
Gorai.011G014100 Gossypium raimondii HOM05D007941 ORTHO05D010050 7.1e-27 125.2 178 49.4
Cpa.g.sc152.13 Carica papaya HOM05D007941 ORTHO05D010050 9.3e-27 124.8 182 51.6
Sabra04G0007600 Salix brachista HOM05D007941 ORTHO05D010050 6.0e-26 122.1 179 46.4
Actinidia26916 Actinidia chinensis HOM05D007941 ORTHO05D010050 7.9e-26 121.7 168 46.4
Phvul.003G078500 Phaseolus vulgaris HOM05D007941 ORTHO05D010050 1.0e-25 121.3 184 48.4
VMungo1215G2837 Vigna mungo HOM05D007941 ORTHO05D010050 1.0e-25 121.3 179 49.2
Glyma.17G013700 Glycine max HOM05D007941 ORTHO05D010050 4.3e-24 115.9 177 48.0
Peaxi162Scf00502g00214 Petunia axillaris HOM05D007941 ORTHO05D010050 4.3e-24 115.9 148 45.3
TPR.G37125 Trifolium pratense HOM05D007941 ORTHO05D010050 6.2e-23 112.1 155 45.8
Gohir.A10G012680 Gossypium hirsutum HOM05D007941 ORTHO05D010050 8.1e-23 111.7 178 46.1
Nn1g07127 Nelumbo nucifera HOM05D007941 ORTHO05D010050 4.0e-22 109.4 198 43.4
Atru.chr10.2217 Acer truncatum HOM05D007941 ORTHO05D010050 6.9e-22 108.6 185 42.2
Cc09_g01710 Coffea canephora HOM05D007941 ORTHO05D010050 5.8e-21 105.5 181 45.3
Ca_21085_v3 Cicer arietinum L. HOM05D007941 ORTHO05D010050 2.9e-20 103.2 180 43.3
arahy.Tifrunner.gnm1.ann1.CCWF18 Arachis hypogaea HOM05D007941 ORTHO05D010050 8.4e-20 101.7 120 53.3
ClCG03G004750 Citrullus lanatus HOM05D007941 ORTHO05D010050 3.2e-19 99.8 178 41.0
CsaV3_1G010790 Cucumis sativus L. HOM05D007941 ORTHO05D010050 5.5e-19 99.0 181 42.0
Sed0010816 Sechium edule HOM05D007941 ORTHO05D010050 2.7e-18 96.7 184 42.4
MELO3C002458.2 Cucumis melo HOM05D007941 ORTHO05D010050 1.8e-17 94.0 186 40.9
arahy.Tifrunner.gnm1.ann1.N60BY5 Arachis hypogaea HOM05D007941 ORTHO05D010050 1.9e-16 90.5 72 68.1
MBI02_g07163_MAGBIO Magnolia biondii HOM05D007941 ORTHO05D010050 4.3e-16 89.4 169 38.5
Nitab4.5_0012670g0020 Nicotiana tabacum HOM05D007941 ORTHO05D010050 5.7e-16 89.0 142 40.1
Sopen03g005520 Solanum pennellii HOM05D007941 ORTHO05D010050 7.4e-16 88.6 150 43.3
Solyc03g031660.1 Solanum lycopersicum HOM05D007941 ORTHO05D010050 4.8e-15 85.9 150 42.0
Nn1g03524 Nelumbo nucifera HOM05D007941 ORTHO05D010050 6.3e-15 85.5 110 50.9
Lj4g0020812 Lotus japonicus HOM05D007941 ORTHO05D010050 8.2e-15 85.1 178 39.9
Medtr4g132080 Medicago truncatula HOM05D007941 ORTHO05D010050 1.4e-11 74.3 174 36.8
PSO832G2769 Papaver somniferum HOM05D007941 ORTHO05D010050 9.3e-11 71.6 203 37.4
PGR004G0641 Punica granatum HOM05D007941 ORTHO05D010050 7.9e-10 68.6 107 49.5
Nitab4.5_0007864g0050 Nicotiana tabacum HOM05D007941 ORTHO05D010050 1.3e-09 67.8 148 37.2
GSVIVG01012729001 Vitis vinifera HOM05D007941 ORTHO05D010050 6.7e-09 65.5 83 51.8
Dinv13890 Davidia involucrata HOM05D007941 ORTHO05D010050 8.2e-07 58.5 92 43.5
SEGI_12080 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 1.1e-06 58.2 134 35.1


User provided reference genes

Program Settings