Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G0021 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.9e-59 232.3 116 100.0
FvH4_3g39940 Fragaria vesca HOM05D000162 ORTHO05D000090 3.2e-38 161.8 111 73.9
FAN21G3831 Fragaria x ananassa HOM05D000027 ORTHO05D000090 8.2e-34 147.1 111 73.0
RcHm_v2.0_Chr5g0071481 Rosa chinensis HOM05D000162 ORTHO05D000090 1.4e-33 146.4 109 70.6
FvH4_3g39650 Fragaria vesca HOM05D000162 ORTHO05D003288 2.2e-31 139.0 75 88.0
FAN11G0438 Fragaria x ananassa HOM05D000027 ORTHO05D001163 2.2e-31 139.0 75 88.0
FAN16G1933 Fragaria x ananassa HOM05D000027 ORTHO05D001163 2.2e-31 139.0 75 88.0
FAN21G0329 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.3e-28 129.0 111 66.7
FAN16G0919 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.3e-26 123.2 111 64.0
FAN25G0502 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.3e-26 123.2 108 64.8
FvH4_3g40130 Fragaria vesca HOM05D000162 ORTHO05D000090 1.0e-23 113.6 111 60.4
FAN11G2498 Fragaria x ananassa HOM05D000044 ORTHO05D000090 3.4e-19 98.6 70 71.4
FvH4_3g38931 Fragaria vesca HOM05D000162 ORTHO05D000090 4.8e-18 94.7 115 50.4
FAN07G1221 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.3e-18 94.0 111 48.6
FAN16G0356 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.3e-18 94.0 124 46.0
FAN11G2311 Fragaria x ananassa HOM05D000366 ORTHO05D000437 2.4e-17 92.4 115 49.6
FvH4_3g13950 Fragaria vesca HOM05D000162 ORTHO05D000090 1.6e-16 89.7 110 51.8
FvH4_3g40110 Fragaria vesca HOM05D000162 ORTHO05D000090 2.7e-16 89.0 50 84.0
FvH4_5g09470 Fragaria vesca HOM05D000162 ORTHO05D000090 2.7e-16 89.0 115 49.6
FAN11G0861 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.7e-16 89.0 50 84.0
FvH4_3g38590 Fragaria vesca HOM05D000162 ORTHO05D000090 5.9e-16 87.8 115 49.6
FvH4_6g52550 Fragaria vesca HOM05D000162 ORTHO05D000090 7.7e-16 87.4 115 47.8
FAN11G2157 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.7e-16 87.4 124 46.8
FAN11G0787 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.3e-15 86.7 110 50.9
FAN05G4021 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.9e-15 85.5 102 52.0
FAN05G5463 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.9e-15 85.5 102 52.0
FAN05G2167 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.8e-15 85.1 102 51.0
FAN21G2184 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.8e-15 85.1 114 48.2
RcHm_v2.0_Chr5g0077451 Rosa chinensis HOM05D000162 ORTHO05D000090 8.5e-15 84.0 115 47.8
FAN05G1495 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-14 83.6 99 51.5
FAN05G3453 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-14 83.6 102 51.0
FAN09G1490 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.9e-14 82.8 102 50.0
FAN05G1965 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.5e-14 82.4 102 50.0
RcHm_v2.0_Chr5g0041821 Rosa chinensis HOM05D000162 ORTHO05D000090 2.5e-14 82.4 119 50.4
FAN11G1276 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.2e-14 82.0 114 44.7
FAN05G4140 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.5e-14 81.3 99 49.5
FvH4_4g22280 Fragaria vesca HOM05D000162 ORTHO05D000090 7.2e-14 80.9 102 47.1
FAN05G5046 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.2e-14 80.9 102 49.0
FAN11G2810 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.2e-14 80.9 110 46.4
FAN25G0292 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.2e-14 80.9 110 45.5
RcHm_v2.0_Chr5g0069321 Rosa chinensis HOM05D000162 ORTHO05D000090 2.1e-13 79.3 105 46.7
Prupe.6G093300 Prunus persica HOM05D000162 ORTHO05D000090 2.7e-13 79.0 114 46.5
FvH4_3g44300 Fragaria vesca HOM05D000162 ORTHO05D000090 4.7e-13 78.2 105 46.7
FAN16G2116 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.1e-13 77.8 91 48.4
FAN05G5266 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.0e-13 77.4 91 49.5
FAN05G5528 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.0e-13 77.4 102 46.1
FAN25G0639 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.0e-13 77.4 110 44.5
MD11G1128700 Malus domestica HOM05D000162 ORTHO05D000090 1.0e-12 77.0 108 46.3
FAN21G0314 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.4e-12 76.6 110 44.5
Prupe.6G086000 Prunus persica HOM05D000162 ORTHO05D000090 1.8e-12 76.3 102 49.0
RcHm_v2.0_Chr5g0077521 Rosa chinensis HOM05D000162 ORTHO05D000090 1.8e-12 76.3 112 45.5
FAN16G0884 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.0e-12 75.5 110 43.6
Prupe.6G087600 Prunus persica HOM05D000162 ORTHO05D000090 3.0e-12 75.5 102 50.0
RcHm_v2.0_Chr5g0077441 Rosa chinensis HOM05D000162 ORTHO05D000090 3.0e-12 75.5 114 45.6
FAN05G2421 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.0e-12 75.1 102 46.1
FAN21G2264 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.0e-12 75.1 112 43.8
Prupe.3G138000 Prunus persica HOM05D000162 ORTHO05D000090 4.0e-12 75.1 112 42.9
RcHm_v2.0_Chr5g0061091 Rosa chinensis HOM05D000162 ORTHO05D000090 4.0e-12 75.1 111 41.4
RcHm_v2.0_Chr5g0069581 Rosa chinensis HOM05D000162 ORTHO05D000090 4.0e-12 75.1 112 44.6
FAN05G0618 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.2e-12 74.7 91 48.4
FAN05G5335 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.2e-12 74.7 91 48.4
FAN05G2783 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.8e-12 74.3 91 48.4
MD03G1113100 Malus domestica HOM05D000162 ORTHO05D000090 6.8e-12 74.3 113 42.5
Prupe.3G114700 Prunus persica HOM05D000162 ORTHO05D000090 8.8e-12 73.9 107 43.9
RcHm_v2.0_Chr5g0074951 Rosa chinensis HOM05D000162 ORTHO05D000090 8.8e-12 73.9 101 52.5
FAN02G2649 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.2e-11 73.6 91 47.3
FAN11G0422 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.5e-11 73.2 96 46.9
FAN11G0256 Fragaria x ananassa HOM05D000366 ORTHO05D000090 2.0e-11 72.8 97 46.4
RcHm_v2.0_Chr5g0072901 Rosa chinensis HOM05D000162 ORTHO05D000090 2.6e-11 72.4 108 43.5
MD11G1128400 Malus domestica HOM05D000162 ORTHO05D000090 4.4e-11 71.6 99 47.5
RcHm_v2.0_Chr5g0027731 Rosa chinensis HOM05D000162 ORTHO05D000090 4.4e-11 71.6 111 43.2
RcHm_v2.0_Chr5g0069351 Rosa chinensis HOM05D000162 ORTHO05D000090 4.4e-11 71.6 96 43.8
FvH4_3g38020 Fragaria vesca HOM05D000162 ORTHO05D000090 5.7e-11 71.2 96 45.8
FvH4_3g38070 Fragaria vesca HOM05D000162 ORTHO05D000090 5.7e-11 71.2 96 45.8
FvH4_4g22270 Fragaria vesca HOM05D000162 ORTHO05D000090 7.5e-11 70.9 80 51.2
FAN11G2213 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.5e-11 70.9 96 46.9
FAN12G2315 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.5e-11 70.9 80 51.2
Prupe.6G080500 Prunus persica HOM05D000162 ORTHO05D000090 7.5e-11 70.9 110 38.2
MD03G1107100 Malus domestica HOM05D000162 ORTHO05D000090 1.3e-10 70.1 89 48.3
FAN16G2035 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.7e-10 69.7 96 46.9
Prupe.6G090600 Prunus persica HOM05D000162 ORTHO05D000090 2.2e-10 69.3 112 42.9
FAN21G2507 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.8e-10 68.9 111 42.3
MD11G1122400 Malus domestica HOM05D000162 ORTHO05D000090 2.8e-10 68.9 93 45.2
RcHm_v2.0_Chr5g0062161 Rosa chinensis HOM05D000162 ORTHO05D000090 2.8e-10 68.9 111 43.2
MD03G1103500 Malus domestica HOM05D000162 ORTHO05D000090 3.7e-10 68.6 90 46.7
FvH4_3g35200 Fragaria vesca HOM05D000162 ORTHO05D000090 8.3e-10 67.4 111 38.7
Prupe.6G094000 Prunus persica HOM05D000162 ORTHO05D000090 8.3e-10 67.4 112 40.2
FAN17G0136 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-09 67.0 125 43.2
MD11G1128800 Malus domestica HOM05D000162 ORTHO05D000090 1.1e-09 67.0 97 43.3
FAN11G3415 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.8e-09 66.2 82 50.0
Prupe.6G090500 Prunus persica HOM05D000162 ORTHO05D000090 1.8e-09 66.2 111 39.6
RcHm_v2.0_Chr5g0069231 Rosa chinensis HOM05D000162 ORTHO05D000090 1.8e-09 66.2 67 53.7
FAN11G1404 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.1e-09 65.1 105 42.9
FAN25G3591 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.1e-09 65.1 96 41.7
MD11G1135500 Malus domestica HOM05D000162 ORTHO05D000090 4.1e-09 65.1 91 45.1
MD03G1101000 Malus domestica HOM05D000162 ORTHO05D003288 5.4e-09 64.7 78 48.7
Prupe.6G091000 Prunus persica HOM05D000162 ORTHO05D000090 5.4e-09 64.7 112 42.0
Prupe.6G091400 Prunus persica HOM05D000162 ORTHO05D000090 9.1e-09 63.9 99 41.4
MD11G1115600 Malus domestica HOM05D000162 ORTHO05D000090 2.0e-08 62.8 110 41.8
FvH4_3g42120 Fragaria vesca HOM05D000162 ORTHO05D000090 3.5e-08 62.0 105 41.0
RcHm_v2.0_Chr6g0265911 Rosa chinensis HOM05D010115 ORTHO05D000090 7.7e-08 60.8 110 40.0
MD03G1106000 Malus domestica HOM05D000162 ORTHO05D000090 1.3e-07 60.1 98 43.9
FvH4_3g38940 Fragaria vesca HOM05D000162 ORTHO05D000090 2.3e-07 59.3 104 38.5
RcHm_v2.0_Chr5g0069261 Rosa chinensis HOM05D000162 ORTHO05D000090 2.3e-07 59.3 42 69.0
FAN25G0680 Fragaria x ananassa HOM05D004321 ORTHO05D004889 2.9e-07 58.9 103 39.8
MD10G1069200 Malus domestica HOM05D000162 ORTHO05D000090 3.8e-07 58.5 90 46.7
FAN25G3795 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.6e-07 57.4 95 41.1
Prupe.6G117200 Prunus persica HOM05D000162 ORTHO05D000090 8.6e-07 57.4 93 37.6
RcHm_v2.0_Chr5g0074981 Rosa chinensis HOM05D000162 ORTHO05D000090 8.6e-07 57.4 112 45.5
FvH4_3g37480 Fragaria vesca HOM05D000162 ORTHO05D000090 1.1e-06 57.0 110 39.1
FAN17G0052 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-06 57.0 42 69.0
FAN11G1758 Fragaria x ananassa HOM05D004321 ORTHO05D004889 1.5e-06 56.6 91 39.6
MD03G1099700 Malus domestica HOM05D000162 ORTHO05D000090 3.3e-06 55.5 85 42.4
RcHm_v2.0_Chr5g0069651 Rosa chinensis HOM05D021378 ORTHO05D000090 3.3e-06 55.5 104 42.3
HanXRQChr03g0091251 Helianthus annuus HOM05D000162 ORTHO05D000090 4.2e-06 55.1 43 60.5
HanXRQChr03g0091731 Helianthus annuus HOM05D000162 ORTHO05D000090 4.2e-06 55.1 43 60.5
HanXRQChr09g0252881 Helianthus annuus HOM05D000162 ORTHO05D000090 4.2e-06 55.1 49 53.1
FAN16G1190 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.5e-06 54.7 95 40.0
HanXRQChr03g0090781 Helianthus annuus HOM05D000162 ORTHO05D000090 5.5e-06 54.7 43 58.1
FvH4_3g31590 Fragaria vesca HOM05D000162 ORTHO05D000090 9.5e-06 53.9 106 39.6
FvH4_3g37481 Fragaria vesca HOM05D000162 ORTHO05D000090 9.5e-06 53.9 95 43.2


User provided reference genes

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