Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 4.2e-70 268.1 154 100.0
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 9.8e-67 256.9 155 96.8
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.3e-66 256.5 154 96.8
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 5.0e-63 244.6 156 92.9
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 2.2e-58 229.2 152 82.2
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 2.4e-57 225.7 155 81.9
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 4.3e-54 214.9 150 74.0
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 2.0e-51 206.1 156 71.2
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 5.4e-49 198.0 153 69.9
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 1.2e-48 196.8 145 78.6
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 1.6e-48 196.4 153 77.1
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 7.8e-48 194.1 151 68.9
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 1.0e-47 193.7 149 75.8
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 1.0e-47 193.7 144 70.1
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 3.0e-47 192.2 152 67.8
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 5.0e-47 191.4 156 66.7
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 6.6e-47 191.0 139 71.9
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 8.6e-47 190.7 131 74.8
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 1.1e-46 190.3 145 70.3
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 1.5e-46 189.9 135 72.6
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 1.5e-46 189.9 154 66.2
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 1.9e-46 189.5 156 65.4
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 2.5e-46 189.1 159 69.2
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 5.6e-46 188.0 157 66.2
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.2e-45 186.8 133 74.4
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 2.1e-45 186.0 129 70.5
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 4.7e-45 184.9 153 66.0
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 4.7e-45 184.9 123 74.8
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 8.1e-45 184.1 125 73.6
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 1.1e-44 183.7 156 62.8
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 1.4e-44 183.3 151 63.6
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 1.8e-44 183.0 153 63.4
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 1.8e-44 183.0 128 71.9
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 2.3e-44 182.6 152 63.8
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 4.0e-44 181.8 153 66.0
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 4.0e-44 181.8 137 67.9
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 5.2e-44 181.4 153 67.3
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 5.2e-44 181.4 125 85.6
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 5.2e-44 181.4 139 72.7
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 8.9e-44 180.6 159 64.8
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.2e-43 180.3 132 72.0
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.5e-43 179.9 135 68.1
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 2.0e-43 179.5 160 64.4
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 2.0e-43 179.5 160 64.4
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 2.0e-43 179.5 153 62.7
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 2.6e-43 179.1 153 63.4
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 2.6e-43 179.1 128 71.9
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.6e-43 179.1 153 62.7
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 3.4e-43 178.7 153 62.1
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 3.4e-43 178.7 133 66.9
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 4.4e-43 178.3 151 65.6
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 4.4e-43 178.3 145 68.3
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 4.4e-43 178.3 142 68.3
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 7.5e-43 177.6 132 65.9
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 7.5e-43 177.6 153 65.4
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 7.5e-43 177.6 153 62.1
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 9.8e-43 177.2 123 71.5
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 9.8e-43 177.2 151 64.9
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 9.8e-43 177.2 143 65.7
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 1.3e-42 176.8 163 63.2
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.3e-42 176.8 129 70.5
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 2.2e-42 176.0 163 63.2
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 2.2e-42 176.0 148 62.2
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 2.2e-42 176.0 128 73.4
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.2e-42 176.0 124 68.5
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 2.9e-42 175.6 123 69.1
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 2.9e-42 175.6 152 63.2
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 2.9e-42 175.6 131 67.2
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 3.7e-42 175.3 123 68.3
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 4.9e-42 174.9 129 69.8
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 8.3e-42 174.1 138 73.2
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 8.3e-42 174.1 153 60.8
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 1.1e-41 173.7 132 67.4
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.4e-41 173.3 148 62.8
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 2.4e-41 172.6 124 69.4
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 4.1e-41 171.8 143 58.7
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 4.1e-41 171.8 128 66.4
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 9.2e-41 170.6 133 71.4
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 2.1e-40 169.5 156 69.2
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 3.5e-40 168.7 145 63.4
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 4.6e-40 168.3 124 70.2
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 1.0e-39 167.2 123 65.0
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 1.3e-39 166.8 150 62.0
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 1.3e-39 166.8 133 72.2
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.7e-39 166.4 139 67.6
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 3.0e-39 165.6 154 59.7
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 3.0e-39 165.6 144 62.5
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 6.6e-39 164.5 124 66.1
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 6.6e-39 164.5 123 69.1
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 1.5e-38 163.3 126 73.0
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 5.6e-38 161.4 125 75.2
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 5.6e-38 161.4 122 67.2
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 1.2e-37 160.2 118 66.9
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 3.6e-37 158.7 125 75.2
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 4.7e-37 158.3 126 63.5
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 8.1e-37 157.5 118 66.1
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 1.4e-36 156.8 137 61.3
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 3.1e-36 155.6 133 65.4
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 1.5e-35 153.3 123 65.0
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 3.4e-35 152.1 121 62.8
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 2.9e-34 149.1 154 59.7
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.4e-33 146.7 126 61.1
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 2.4e-33 146.0 150 56.0
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 3.2e-33 145.6 150 56.0
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 1.2e-32 143.7 126 56.3
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 2.1e-32 142.9 153 54.9
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 2.7e-32 142.5 129 59.7
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 8.6e-31 137.5 90 78.9
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 4.7e-29 131.7 122 54.1
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 7.8e-24 114.4 120 51.7
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 5.1e-23 111.7 121 44.6
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 6.2e-21 104.8 124 45.2
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 1.4e-20 103.6 103 58.3
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 1.4e-20 103.6 141 47.5
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 3.1e-20 102.4 87 64.4
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 6.9e-20 101.3 148 43.2
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 7.6e-19 97.8 152 42.8
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 9.9e-19 97.4 117 45.3
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 6.4e-18 94.7 80 60.0
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 7.9e-16 87.8 78 51.3
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 1.3e-15 87.0 120 37.5
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 9.0e-12 74.3 117 41.0
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 8.7e-07 57.8 57 57.9


User provided reference genes

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