Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G3114 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.4e-281 972.2 475 100.0
FAN21G3088 Fragaria x ananassa HOM05D004096 ORTHO05D000898 6.3e-173 611.3 450 74.0
FAN05G3546 Fragaria x ananassa HOM05D004096 ORTHO05D010213 4.4e-142 508.8 457 64.3
FAN03G1966 Fragaria x ananassa HOM05D004096 ORTHO05D000898 6.4e-141 505.0 365 74.8
FvH4_4g07720 Fragaria vesca HOM05D004096 ORTHO05D010213 2.6e-134 483.0 304 82.6
FAN17G0441 Fragaria x ananassa HOM05D004096 ORTHO05D010213 8.3e-125 451.4 344 71.8
FAN26G1477 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.1e-121 441.0 322 74.2
FvH4_1g25481 Fragaria vesca HOM05D004096 ORTHO05D010213 4.3e-121 439.1 408 59.8
FvH4_2g25151 Fragaria vesca HOM05D004096 ORTHO05D010213 1.5e-118 430.6 422 58.1
FvH4_6g40321 Fragaria vesca HOM05D004096 ORTHO05D010213 1.6e-112 410.6 395 59.0
FAN09G3299 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.6e-107 394.0 336 66.7
FAN03G2973 Fragaria x ananassa HOM05D004096 ORTHO05D000898 8.4e-93 345.1 212 82.1
FAN26G2536 Fragaria x ananassa HOM05D004096 ORTHO05D000898 7.1e-92 342.0 330 60.9
FAN28G1271 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.1e-81 308.1 248 70.6
FAN15G0356 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.2e-75 288.1 210 67.6
FAN28G0827 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.2e-72 277.3 257 63.0
FAN13G2044 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.2e-61 240.7 365 40.8
FAN13G3102 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.2e-61 240.7 365 40.8
FAN18G2232 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.2e-61 240.7 365 40.8
FAN28G1999 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.2e-61 240.7 348 42.0
FAN18G1768 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.9e-60 237.7 365 40.5
FAN02G1156 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.3e-58 230.7 345 41.2
FAN17G2667 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.9e-53 213.8 118 88.1
FAN27G2778 Fragaria x ananassa HOM05D004096 ORTHO05D000039 3.8e-53 213.4 323 43.0
FAN17G2177 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.8e-48 197.2 296 40.5
FAN28G0714 Fragaria x ananassa HOM05D004096 ORTHO05D000898 8.2e-48 195.7 127 81.1
FAN14G2992 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.1e-47 195.3 297 40.1
FAN23G0656 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.1e-47 195.3 297 40.1
FAN17G2488 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.2e-45 187.6 106 92.5
FvH4_4g03350 Fragaria vesca HOM05D004096 ORTHO05D029627 9.4e-44 182.2 374 35.8
FvH4_3g37260 Fragaria vesca HOM05D004096 ORTHO05D046460 9.8e-41 172.2 184 55.4
FAN15G2942 Fragaria x ananassa HOM05D004096 ORTHO05D010213 7.0e-39 166.0 166 60.2
FAN26G2545 Fragaria x ananassa HOM05D004096 ORTHO05D000898 9.1e-39 165.6 180 53.3
FAN24G0382 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.6e-38 164.9 180 54.4
FAN20G2128 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.0e-38 164.5 260 39.6
RcHm_v2.0_Chr2g0155601 Rosa chinensis HOM05D004096 ORTHO05D000898 4.7e-35 153.3 354 30.5
FAN16G0780 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.6e-33 147.5 95 81.1
FAN04G2869 Fragaria x ananassa HOM05D004096 ORTHO05D010213 4.1e-31 140.2 165 53.9
FAN04G2130 Fragaria x ananassa HOM05D004096 ORTHO05D012519 7.0e-31 139.4 122 56.6
FvH4_2g27901 Fragaria vesca HOM05D004096 ORTHO05D000898 6.6e-29 132.9 294 30.6
FAN09G4395 Fragaria x ananassa HOM05D004096 ORTHO05D025475 3.3e-28 130.6 294 30.6
RcHm_v2.0_Chr3g0478081 Rosa chinensis HOM05D004096 ORTHO05D000898 5.6e-28 129.8 310 29.0
FAN16G1907 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.2e-27 128.6 217 35.9
FvH4_3g37244 Fragaria vesca HOM05D004096 ORTHO05D010213 1.6e-27 128.3 73 87.7
RcHm_v2.0_Chr1g0347831 Rosa chinensis HOM05D004096 ORTHO05D000898 4.0e-26 123.6 214 34.6
FAN27G2070 Fragaria x ananassa HOM05D004096 ORTHO05D000898 6.8e-26 122.9 195 35.4
RcHm_v2.0_Chr4g0423011 Rosa chinensis HOM05D004096 ORTHO05D000898 6.8e-26 122.9 214 34.6
FAN01G0214 Fragaria x ananassa HOM05D004096 ORTHO05D029627 2.6e-25 120.9 104 59.6
FAN13G2291 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.4e-25 120.6 202 34.2
FAN22G0991 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.4e-25 120.2 202 35.1
FAN05G1382 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.8e-25 119.8 202 35.6
FAN16G2434 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.8e-25 119.8 202 35.6
FAN25G0030 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.8e-25 119.8 202 35.6
FAN12G0692 Fragaria x ananassa HOM05D004096 ORTHO05D000898 7.5e-25 119.4 200 36.0
FAN15G0550 Fragaria x ananassa HOM05D004096 ORTHO05D000898 7.5e-25 119.4 202 33.2
FAN20G0479 Fragaria x ananassa HOM05D004096 ORTHO05D025475 3.7e-24 117.1 154 39.0
RcHm_v2.0_Chr6g0281911 Rosa chinensis HOM05D004096 ORTHO05D000898 6.4e-24 116.3 193 34.2
FAN09G4098 Fragaria x ananassa HOM05D004096 ORTHO05D000898 8.3e-24 115.9 249 31.3
FAN25G1629 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-23 115.5 154 39.0
FAN02G1861 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.4e-23 115.2 200 35.5
FAN24G2359 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.0e-22 111.3 249 31.3
FvH4_5g19752 Fragaria vesca HOM05D004096 ORTHO05D000898 6.6e-21 106.3 200 32.5
FvH4_7g05770 Fragaria vesca HOM05D004096 ORTHO05D000898 1.5e-20 105.1 200 32.5
FvH4_7g12251 Fragaria vesca HOM05D004096 ORTHO05D000898 1.9e-20 104.8 200 32.5
FAN20G0331 Fragaria x ananassa HOM05D004096 ORTHO05D019141 1.2e-19 102.1 127 44.9
FAN09G2456 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.6e-19 100.5 200 31.5
Prupe.7G070100 Prunus persica HOM05D004096 ORTHO05D000898 3.1e-18 97.4 312 24.7
FAN17G1662 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.0e-18 97.1 122 49.2
FvH4_c19g00020 Fragaria vesca HOM05D004096 ORTHO05D010213 6.8e-18 96.3 108 54.6
RcHm_v2.0_Chr3g0485951 Rosa chinensis HOM05D004096 ORTHO05D000898 8.9e-18 95.9 268 28.0
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 1.2e-17 95.5 192 29.7
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 9.8e-17 92.4 160 33.1
FAN27G1870 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.7e-16 91.7 193 28.5
FAN20G1880 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.7e-16 90.5 193 28.5
FvH4_2g09911 Fragaria vesca HOM05D004096 ORTHO05D000898 4.9e-16 90.1 193 29.0
FAN24G1944 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-15 89.0 193 28.5
FAN17G2905 Fragaria x ananassa HOM05D004096 ORTHO05D046460 7.0e-15 86.3 102 50.0
RcHm_v2.0_Chr6g0266661 Rosa chinensis HOM05D007993 ORTHO05D000898 7.0e-15 86.3 197 29.9
FAN22G2114 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.2e-14 85.5 202 27.7
Prupe.5G238300 Prunus persica HOM05D004096 ORTHO05D000898 1.2e-14 85.5 228 26.3
RcHm_v2.0_Chr7g0204351 Rosa chinensis HOM05D007993 ORTHO05D000898 4.6e-14 83.6 193 25.9
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 7.8e-14 82.8 194 24.2
RcHm_v2.0_Chr6g0268131 Rosa chinensis HOM05D010142 ORTHO05D012232 7.8e-14 82.8 147 30.6
FvH4_7g06960 Fragaria vesca HOM05D004096 ORTHO05D035294 1.7e-13 81.6 114 47.4
FAN17G0422 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.0e-13 80.9 133 30.8
FAN18G0249 Fragaria x ananassa HOM05D004096 ORTHO05D046227 3.0e-13 80.9 204 27.0
FAN18G0847 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.1e-13 80.1 196 24.0
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 6.6e-13 79.7 195 28.2
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 1.5e-12 78.6 195 27.2
Prupe.7G017400 Prunus persica HOM05D004096 ORTHO05D000898 1.9e-12 78.2 190 26.8
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 1.9e-12 78.2 195 26.7
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 2.5e-12 77.8 195 26.2
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 2.5e-12 77.8 195 25.6
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 3.3e-12 77.4 200 25.5
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 3.3e-12 77.4 195 26.2
FvH4_5g33480 Fragaria vesca HOM05D004096 ORTHO05D046227 3.3e-12 77.4 196 27.0
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 7.3e-12 76.3 191 26.2
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 7.3e-12 76.3 195 26.7
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 1.6e-11 75.1 191 25.1
THA.LOC104805598 Tarenaya hassleriana HOM05D007651 ORTHO05D000898 1.6e-11 75.1 191 25.7
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 2.8e-11 74.3 209 24.9
Atru.chr1.1775 Acer truncatum HOM05D007651 ORTHO05D001192 6.2e-11 73.2 191 27.2
Gohir.A06G176700 Gossypium hirsutum HOM05D007651 ORTHO05D000898 6.2e-11 73.2 191 25.1
FAN03G1893 Fragaria x ananassa HOM05D004096 ORTHO05D202910 8.1e-11 72.8 72 55.6
RcHm_v2.0_Chr1g0372251 Rosa chinensis HOM05D004096 ORTHO05D000898 1.1e-10 72.4 111 38.7
FAN08G0454 Fragaria x ananassa HOM05D004096 ORTHO05D012519 1.8e-10 71.6 92 42.4
Ciclev10011294m.g Citrus clementina HOM05D007651 ORTHO05D001192 2.3e-10 71.2 191 27.2
FAN21G1436 Fragaria x ananassa HOM05D000614 ORTHO05D000463 2.3e-10 71.2 261 25.3
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 3.1e-10 70.9 195 25.1
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 3.1e-10 70.9 195 25.6
Cc00_g22040 Coffea canephora HOM05D004084 ORTHO05D004662 4.0e-10 70.5 146 28.8
Prupe.6G153700 Prunus persica HOM05D004096 ORTHO05D000898 4.0e-10 70.5 154 27.9
FvH4_3g26550 Fragaria vesca HOM05D007993 ORTHO05D000898 5.2e-10 70.1 192 28.1
COL.COLO4_20373 Corchorus olitorius HOM05D007993 ORTHO05D000898 6.8e-10 69.7 227 22.0
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 6.8e-10 69.7 195 25.6
FAN08G3199 Fragaria x ananassa HOM05D008674 ORTHO05D000898 8.9e-10 69.3 189 28.6
RcHm_v2.0_Chr7g0224131 Rosa chinensis HOM05D004096 ORTHO05D000898 8.9e-10 69.3 111 39.6
Dinv13142 Davidia involucrata HOM05D008396 ORTHO05D000898 1.2e-09 68.9 209 24.4
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 1.2e-09 68.9 198 25.3
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 1.5e-09 68.6 191 26.2
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 2.0e-09 68.2 195 25.1
Rhsim04G0060600 Rhododendron simsii HOM05D007651 ORTHO05D000898 2.0e-09 68.2 149 28.2
FAN21G3110 Fragaria x ananassa HOM05D008674 ORTHO05D000898 3.4e-09 67.4 189 29.1
FAN28G0955 Fragaria x ananassa HOM05D008674 ORTHO05D000898 3.4e-09 67.4 185 28.6
FAN09G2500 Fragaria x ananassa HOM05D008674 ORTHO05D000898 4.4e-09 67.0 189 28.6
FAN10G0819 Fragaria x ananassa HOM05D008674 ORTHO05D000898 5.8e-09 66.6 193 27.5
FAN20G0366 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.8e-09 66.6 97 29.9
FAN28G2991 Fragaria x ananassa HOM05D008674 ORTHO05D000898 5.8e-09 66.6 189 28.0
FAN16G3666 Fragaria x ananassa HOM05D008674 ORTHO05D000898 7.5e-09 66.2 189 28.0
FAN20G2217 Fragaria x ananassa HOM05D004096 ORTHO05D000898 9.9e-09 65.9 96 30.2
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 9.9e-09 65.9 195 23.6
FvH4_7g03531 Fragaria vesca HOM05D007993 ORTHO05D000898 2.2e-08 64.7 192 27.1
FAN14G3035 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.9e-08 63.5 135 30.4
FvH4_7g10221 Fragaria vesca HOM05D004096 ORTHO05D000898 1.4e-07 62.0 186 26.9
FAN27G2446 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.9e-07 61.6 184 29.3
FAN06G1954 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.2e-07 60.8 224 22.8
Dinv15468 Davidia involucrata HOM05D008396 ORTHO05D000898 5.4e-07 60.1 138 27.5
FAN05G4611 Fragaria x ananassa HOM05D000980 ORTHO05D000649 5.4e-07 60.1 190 24.7
FvH4_6g40313 Fragaria vesca HOM05D011469 ORTHO05D014217 9.2e-07 59.3 147 27.2
FvH4_c6g00030 Fragaria vesca HOM05D011469 ORTHO05D014217 9.2e-07 59.3 147 27.2
FAN04G2605 Fragaria x ananassa HOM05D008674 ORTHO05D000898 9.2e-07 59.3 186 25.3
FvH4_1g25490 Fragaria vesca HOM05D011469 ORTHO05D014217 1.2e-06 58.9 147 27.2
FvH4_4g03327 Fragaria vesca HOM05D011469 ORTHO05D014217 1.2e-06 58.9 147 27.2
Atru.chr8.438 Acer truncatum HOM05D004096 ORTHO05D000898 1.6e-06 58.5 177 26.0
Rhsim02G0127200 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.6e-06 58.5 164 23.2
Dinv07106 Davidia involucrata HOM05D008396 ORTHO05D000898 2.1e-06 58.2 147 25.9
Dinv12671 Davidia involucrata HOM05D008396 ORTHO05D000898 2.7e-06 57.8 147 25.9
Dinv14218 Davidia involucrata HOM05D008396 ORTHO05D000898 3.5e-06 57.4 147 26.5
FAN16G2468 Fragaria x ananassa HOM05D004096 ORTHO05D000898 7.8e-06 56.2 157 33.8


User provided reference genes

Program Settings