Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 4.9e-70 267.7 135 100.0
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 4.5e-68 261.2 135 97.8
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.9e-66 255.8 139 95.0
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 4.0e-64 248.1 130 96.2
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.6e-63 245.4 130 95.4
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 1.5e-58 229.6 130 86.9
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 1.6e-44 183.0 127 70.9
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 5.6e-42 174.5 123 68.3
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 3.8e-38 161.8 121 64.5
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 1.6e-36 156.4 123 58.5
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 1.6e-36 156.4 119 61.3
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 2.1e-36 156.0 123 58.5
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 2.7e-36 155.6 111 65.8
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.7e-36 155.6 120 63.3
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.7e-36 155.6 120 63.3
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.7e-36 155.6 120 63.3
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 2.7e-36 155.6 120 62.5
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 3.5e-36 155.2 125 61.6
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 4.6e-36 154.8 129 58.9
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 1.0e-35 153.7 121 61.2
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.0e-35 153.7 121 58.7
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 1.7e-35 152.9 119 58.8
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 1.7e-35 152.9 116 62.9
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 2.3e-35 152.5 121 60.3
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 3.0e-35 152.1 121 61.2
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 3.0e-35 152.1 121 61.2
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 6.6e-35 151.0 121 59.5
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 1.5e-34 149.8 134 57.5
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 1.5e-34 149.8 118 57.6
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 1.9e-34 149.4 121 61.2
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 1.9e-34 149.4 121 58.7
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 1.9e-34 149.4 107 64.5
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 3.3e-34 148.7 119 60.5
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 7.3e-34 147.5 126 58.7
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 2.1e-33 146.0 120 56.7
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 3.6e-33 145.2 118 58.5
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 4.7e-33 144.8 125 60.0
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 8.1e-33 144.1 121 59.5
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 1.8e-32 142.9 123 56.9
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.8e-32 142.9 117 60.7
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 3.1e-32 142.1 117 58.1
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 3.1e-32 142.1 117 59.8
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 6.9e-32 141.0 121 56.2
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 1.5e-31 139.8 126 55.6
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.5e-31 139.8 107 60.7
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 4.4e-31 138.3 123 52.8
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 5.8e-31 137.9 107 59.8
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 9.9e-31 137.1 121 52.9
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.9e-30 135.6 116 57.8
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 3.8e-30 135.2 106 60.4
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 3.8e-30 135.2 130 53.8
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.4e-29 132.5 106 59.4
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 3.2e-29 132.1 119 52.9
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 4.2e-29 131.7 122 53.3
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 3.5e-28 128.6 133 51.1
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 1.0e-27 127.1 131 47.3
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 1.0e-27 127.1 125 50.4
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.3e-27 126.7 125 49.6
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.7e-27 126.3 102 54.9
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.1e-27 124.8 130 45.4
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.1e-26 123.6 125 48.8
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.1e-26 123.6 125 48.8
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.6e-26 121.3 126 48.4
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 1.3e-25 120.2 117 55.6
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 2.8e-25 119.0 103 55.3
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 6.2e-25 117.9 108 50.9
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 1.3e-22 110.2 102 51.0
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 1.7e-22 109.8 121 47.9
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.4e-21 106.7 119 47.1
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 5.4e-21 104.8 112 46.4
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 9.3e-21 104.0 122 45.9
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 1.6e-20 103.2 118 44.9
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.5e-20 102.1 112 47.3
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 1.0e-19 100.5 122 43.4
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.0e-19 99.0 99 49.5
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.5e-18 96.7 110 44.5
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 5.6e-18 94.7 100 46.0
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 5.6e-18 94.7 124 44.4
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.6e-18 94.0 116 40.5
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.8e-17 92.4 109 38.5
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 6.2e-17 91.3 118 38.1
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 1.1e-16 90.5 118 41.5
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 5.3e-16 88.2 95 47.4
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.9e-16 87.8 121 41.3
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.5e-15 86.7 124 41.9
PGSC0003DMG400029246 Solanum tuberosum HOM05D006839 ORTHO05D007872 4.5e-15 85.1 78 52.6
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.6e-15 84.3 95 47.4
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 7.6e-15 84.3 110 42.7
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.2e-14 82.8 113 38.9
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.8e-14 82.0 113 38.1
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.1e-13 80.5 121 35.5
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.4e-13 80.1 120 36.7
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.4e-13 80.1 102 39.2
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.2e-13 78.6 107 45.8
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.2e-13 78.6 116 37.9
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 5.5e-13 78.2 102 36.3
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.1e-13 77.8 106 40.6
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 1.6e-12 76.6 55 60.0
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.1e-12 76.3 86 43.0
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.5e-12 75.5 120 35.8
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.0e-11 73.9 121 30.6
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.3e-11 73.6 102 38.2
SMO364G0778 Selaginella moellendorffii HOM05D006839 ORTHO05D007872 1.8e-11 73.2 132 34.8
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.9e-11 72.0 121 33.9
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.4e-08 62.8 116 33.6
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 1.7e-06 56.6 131 32.8
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.5e-06 54.7 111 33.3


User provided reference genes

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