Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2843 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.3e-117 424.1 243 100.0
FAN27G3388 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-80 303.9 232 72.8
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.9e-71 271.2 230 75.7
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-69 266.5 230 74.3
FAN02G4625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.2e-68 261.2 230 74.8
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 7.7e-66 254.6 230 71.7
FAN02G0224 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-59 233.0 241 68.5
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 1.2e-55 220.7 230 66.1
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 7.4e-53 211.5 231 56.3
FvH4_2g35530 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-52 210.7 157 90.4
FAN04G1304 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-50 202.6 214 68.2
FvH4_3g21760 Fragaria vesca HOM05D002813 ORTHO05D003203 4.5e-50 202.2 246 59.3
FAN11G3977 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.4e-45 185.7 235 60.0
FAN09G4302 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-43 180.6 156 79.5
FvH4_6g06400 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-41 174.5 223 62.3
FAN16G2005 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-41 174.5 215 60.9
FAN21G2418 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.1e-39 165.2 227 45.4
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-38 163.3 222 48.2
RcHm_v2.0_Chr3g0468781 Rosa chinensis HOM05D002813 ORTHO05D003203 1.7e-36 157.1 235 50.2
FAN05G0887 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-36 156.8 222 58.1
FvH4_6g15310 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-35 153.7 222 57.7
FAN02G3770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-35 153.7 222 57.7
FAN09G1014 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-35 152.5 222 57.7
FAN09G3756 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.0e-35 151.8 177 68.4
FAN25G3517 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-34 151.0 235 49.8
FAN05G3268 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-34 150.6 187 64.7
FAN18G2831 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-34 149.4 217 57.6
FAN09G1205 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-32 144.4 174 52.3
FAN14G1246 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-30 137.1 151 70.2
FAN18G2037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.3e-28 128.6 217 53.5
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 1.4e-27 127.5 207 42.5
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 2.4e-27 126.7 209 37.8
FAN21G3097 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-27 126.7 166 48.8
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 7.0e-27 125.2 229 39.3
FvH4_5g19260 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-26 124.4 153 67.3
FvH4_6g10180 Fragaria vesca HOM05D004619 ORTHO05D003203 2.9e-25 119.8 129 55.0
FAN14G2999 Fragaria x ananassa HOM05D004619 ORTHO05D003203 2.9e-25 119.8 129 55.0
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 1.5e-24 117.5 210 40.0
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 1.9e-24 117.1 210 40.5
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-24 115.2 189 39.7
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-23 114.4 210 39.5
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 2.8e-23 113.2 187 38.0
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 2.8e-23 113.2 206 39.8
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 2.8e-23 113.2 207 39.1
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 3.6e-23 112.8 189 39.7
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-23 112.5 237 34.2
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-22 111.3 234 33.8
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-22 111.3 234 33.8
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-22 110.5 194 38.1
FAN14G0433 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-22 110.5 171 59.1
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-22 110.5 194 38.1
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-22 110.5 210 39.0
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-22 110.2 207 38.6
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 2.3e-22 110.2 224 37.5
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 5.2e-22 109.0 219 36.1
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-21 107.8 218 36.7
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-21 107.5 194 36.1
FvH4_3g11280 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-21 107.5 213 39.0
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-21 106.7 189 38.1
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-21 105.5 194 38.1
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 7.5e-21 105.1 206 37.9
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.8e-21 104.8 202 38.6
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.8e-21 104.8 206 37.4
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-20 104.4 244 35.2
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-20 103.6 192 35.4
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.9e-20 102.4 235 34.9
FAN21G1994 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.3e-20 101.7 232 36.6
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-19 101.3 232 36.6
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-19 101.3 232 36.6
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-19 100.5 235 35.3
FAN04G3253 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-19 100.5 218 35.3
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 2.4e-19 100.1 214 36.4
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 3.2e-19 99.8 219 36.5
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-19 99.8 232 36.6
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 4.1e-19 99.4 198 36.9
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 4.1e-19 99.4 207 35.7
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 5.4e-19 99.0 225 35.6
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.2e-19 98.2 219 36.1
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-18 97.8 232 36.2
FAN20G1057 Fragaria x ananassa HOM05D002813 ORTHO05D000003 1.6e-18 97.4 206 44.2
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-18 97.4 206 36.4
FvH4_2g32540 Fragaria vesca HOM05D002813 ORTHO05D003203 2.7e-18 96.7 180 37.2
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 2.7e-18 96.7 206 38.8
FvH4_3g00150 Fragaria vesca HOM05D002813 ORTHO05D003203 3.5e-18 96.3 209 36.8
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.8e-18 95.1 206 37.4
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 1.3e-17 94.4 224 34.8
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-17 94.0 208 36.5
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 2.3e-17 93.6 216 33.3
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-17 93.6 208 36.5
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 2.3e-17 93.6 217 32.7
FAN02G4209 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-17 93.2 218 35.8
FAN02G0699 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.9e-17 92.8 208 36.1
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.9e-17 92.8 208 36.1
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.9e-17 92.8 208 36.1
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 5.0e-17 92.4 232 35.8
RcHm_v2.0_Chr7g0185371 Rosa chinensis HOM05D002813 ORTHO05D003203 1.1e-16 91.3 222 36.0
FvH4_5g12190 Fragaria vesca HOM05D002813 ORTHO05D003203 1.9e-16 90.5 238 30.7
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 1.9e-16 90.5 209 32.1
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 4.3e-16 89.4 229 34.9
FAN05G2846 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.3e-16 89.4 84 60.7
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-16 89.0 219 33.3
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 5.6e-16 89.0 228 32.5
FAN14G5169 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.5e-16 88.2 208 35.6
FvH4_6g10172 Fragaria vesca HOM05D002813 ORTHO05D003203 1.6e-15 87.4 89 58.4
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-15 87.4 204 34.3
Dinv27902 Davidia involucrata HOM05D002813 ORTHO05D003203 2.1e-15 87.0 219 31.5
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 2.1e-15 87.0 227 33.0
FAN14G4635 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.8e-15 86.7 74 62.2
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 2.8e-15 86.7 228 32.9
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 2.8e-15 86.7 222 32.0
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-15 85.9 238 30.3
FvH4_5g33281 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-14 84.7 78 56.4
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 2.3e-14 83.6 206 47.1
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 3.1e-14 83.2 236 28.8
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-14 83.2 217 32.3
FAN18G2017 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-14 83.2 75 57.3
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 3.1e-14 83.2 224 32.6
FAN05G5767 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-14 82.4 93 49.5
FAN15G1653 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-14 82.4 145 38.6
FvH4_3g30491 Fragaria vesca HOM05D002813 ORTHO05D003203 6.8e-14 82.0 83 51.8
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-14 82.0 216 29.2
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 8.9e-14 81.6 205 33.2
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 8.9e-14 81.6 214 42.1
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 1.5e-13 80.9 234 32.1
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 2.0e-13 80.5 213 33.3
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 2.0e-13 80.5 219 33.8
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-13 80.1 238 29.4
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.4e-13 79.7 216 28.7
Mapoly0100s0050 Marchantia polymorpha HOM05D002813 ORTHO05D003203 4.4e-13 79.3 218 28.4
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.8e-13 78.2 189 30.7
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 2.9e-12 76.6 216 32.9
FAN21G2238 Fragaria x ananassa HOM05D000437 ORTHO05D003203 2.9e-12 76.6 162 37.7
HanXRQChr12g0371761 Helianthus annuus HOM05D002813 ORTHO05D003203 2.9e-12 76.6 198 29.3
FAN28G0350 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.4e-12 75.5 84 48.8
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 8.3e-12 75.1 247 31.6
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 1.1e-11 74.7 225 28.9
CSS0022259 Camellia sinensis var. sinensis HOM05D002813 ORTHO05D003203 1.4e-11 74.3 165 35.8
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 1.9e-11 73.9 216 28.7
FvH4_5g10370 Fragaria vesca HOM05D002813 ORTHO05D003203 1.9e-11 73.9 180 32.2
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-11 73.6 224 27.7
HanXRQChr12g0371751 Helianthus annuus HOM05D002813 ORTHO05D003203 7.0e-11 72.0 205 30.2
FvH4_2g32600 Fragaria vesca HOM05D002813 ORTHO05D003203 9.2e-11 71.6 193 34.7
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 1.2e-10 71.2 186 33.9
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 1.6e-10 70.9 214 32.2
FvH4_5g09361 Fragaria vesca HOM05D002813 ORTHO05D003203 2.0e-10 70.5 224 32.6
TWI63G1080 Tripterygium wilfordii HOM05D002813 ORTHO05D003203 2.7e-10 70.1 222 36.5
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 3.5e-10 69.7 216 28.2
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-09 67.4 211 35.5
FAN21G1333 Fragaria x ananassa HOM05D000259 ORTHO05D008185 1.7e-09 67.4 96 51.0
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 3.0e-09 66.6 218 28.4
FAN14G4337 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-09 65.9 56 62.5
FvH4_5g12210 Fragaria vesca HOM05D002813 ORTHO05D003203 8.6e-09 65.1 102 43.1
FvH4_7g18342 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-08 64.3 167 34.1
FAN06G2359 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-08 63.9 161 33.5
FAN18G3306 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-08 63.2 82 46.3
SEGI_37199 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 3.3e-08 63.2 96 41.7
FAN15G1647 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-08 62.4 180 31.1
FAN25G3196 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-08 62.4 209 44.0
SEGI_20328 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 5.6e-08 62.4 91 47.3
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 5.6e-08 62.4 223 30.0
HanXRQChr12g0371771 Helianthus annuus HOM05D002813 ORTHO05D003203 7.3e-08 62.0 182 28.6
FAN24G1750 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-07 61.2 80 45.0
FAN16G0188 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-07 60.8 177 46.9
FAN25G0311 Fragaria x ananassa HOM05D000808 ORTHO05D000863 1.6e-07 60.8 144 33.3
RcHm_v2.0_Chr5g0073461 Rosa chinensis HOM05D002813 ORTHO05D003203 1.6e-07 60.8 71 47.9
FAN18G0728 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.8e-07 60.1 89 42.7
FvH4_5g12211 Fragaria vesca HOM05D002813 ORTHO05D003203 3.6e-07 59.7 93 38.7
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-07 59.7 233 32.2
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-07 59.3 233 32.2
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-07 59.3 168 32.1
FAN01G2106 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.2e-07 58.9 102 42.2
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.0e-07 58.5 233 31.8
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-06 57.4 233 31.8
HanXRQChr12g0371741 Helianthus annuus HOM05D002813 ORTHO05D003203 1.8e-06 57.4 191 24.1
FAN20G2689 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-06 56.6 66 48.5
FAN27G2003 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.0e-06 56.2 100 42.0
FAN21G0006 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-06 55.8 209 29.2
FAN02G3428 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-06 55.5 75 46.7


User provided reference genes

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