Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 0.0e+00 1164.1 603 100.0
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 2.0e-240 835.9 478 93.9
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 7.8e-237 823.9 478 93.1
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.9e-214 749.6 427 93.7
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 3.3e-203 712.2 489 79.8
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 8.4e-130 468.4 504 58.5
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 1.9e-113 414.1 486 54.7
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 4.5e-107 392.9 509 51.3
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 1.9e-105 387.5 520 50.6
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.5e-105 387.1 505 52.9
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 2.1e-96 357.5 510 50.2
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 1.6e-93 347.8 516 48.4
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 3.1e-92 343.6 495 48.9
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 3.1e-92 343.6 510 49.4
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 1.6e-88 331.3 492 48.6
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.1e-86 325.1 505 49.7
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 1.5e-86 324.7 535 45.8
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 2.0e-86 324.3 468 50.4
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.1e-84 318.5 519 48.6
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 4.5e-83 313.2 493 44.8
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 2.0e-78 297.7 498 46.2
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 9.1e-76 288.9 541 42.7
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 2.9e-74 283.9 499 45.3
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 9.4e-73 278.9 477 45.1
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 4.7e-72 276.6 505 44.0
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.0e-71 275.4 521 42.6
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 1.0e-71 275.4 497 42.9
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 1.1e-70 271.9 490 43.3
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 2.0e-70 271.2 449 45.7
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 5.7e-70 269.6 468 46.4
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.2e-69 267.7 451 45.0
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 1.2e-67 261.9 450 45.8
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 2.0e-67 261.2 496 43.3
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 3.5e-67 260.4 457 44.0
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 1.4e-63 248.4 519 40.8
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 3.0e-63 247.3 448 43.1
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 3.7e-61 240.4 483 42.0
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 1.1e-60 238.8 473 41.6
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 2.4e-60 237.7 519 40.1
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.2e-59 235.3 508 42.1
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 2.0e-59 234.6 495 42.0
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 4.5e-59 233.4 471 40.6
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 2.2e-58 231.1 517 40.0
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 2.9e-58 230.7 445 42.9
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 5.5e-57 226.5 504 42.5
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 1.6e-56 224.9 403 43.7
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 6.1e-56 223.0 289 51.9
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 8.0e-56 222.6 492 41.7
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 1.4e-55 221.9 481 40.7
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 1.4e-55 221.9 498 38.8
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 3.0e-55 220.7 446 40.6
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 4.0e-55 220.3 453 39.3
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 5.2e-55 219.9 481 40.5
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.7e-53 214.9 464 41.6
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 6.3e-53 213.0 485 38.6
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 6.3e-53 213.0 485 38.6
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 4.1e-52 210.3 556 36.5
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 5.4e-52 209.9 483 41.2
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 1.2e-51 208.8 445 41.1
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 1.7e-50 204.9 501 36.9
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 1.5e-49 201.8 513 37.8
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 2.5e-49 201.1 501 38.7
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 9.5e-49 199.1 510 39.2
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 1.2e-48 198.7 479 38.2
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 8.0e-48 196.1 399 43.4
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 5.2e-47 193.4 487 39.0
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 5.2e-47 193.4 478 37.9
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 1.5e-46 191.8 498 37.1
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 7.5e-46 189.5 462 37.7
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 1.3e-45 188.7 504 35.7
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 1.7e-42 178.3 488 37.5
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 3.9e-42 177.2 496 36.7
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 6.6e-42 176.4 464 39.2
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 8.6e-42 176.0 497 36.4
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 1.5e-41 175.3 406 38.4
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 9.5e-41 172.6 488 37.3
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 1.2e-40 172.2 392 40.3
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 2.3e-39 167.9 634 30.1
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 3.1e-39 167.5 449 36.5
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 1.5e-38 165.2 446 36.8
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 2.2e-37 161.4 501 35.7
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 3.7e-37 160.6 480 35.6
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 3.2e-36 157.5 432 35.6
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 5.4e-36 156.8 485 36.1
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 2.0e-35 154.8 217 47.5
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 2.7e-35 154.5 462 36.4
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 3.5e-35 154.1 464 36.6
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 6.0e-35 153.3 524 34.0
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 1.3e-34 152.1 511 34.2
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 3.9e-34 150.6 270 46.7
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.9e-33 148.3 363 39.9
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 4.3e-33 147.1 468 35.7
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 8.1e-32 142.9 242 45.9
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 8.1e-32 142.9 146 58.2
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 2.3e-31 141.4 485 33.2
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 2.3e-31 141.4 200 49.0
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 5.2e-31 140.2 190 48.9
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 8.9e-31 139.4 467 34.5
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 2.6e-30 137.9 410 36.3
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 9.8e-30 136.0 409 35.9
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 2.2e-29 134.8 439 33.0
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 3.7e-29 134.0 135 57.0
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 7.1e-28 129.8 279 40.5
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 3.5e-27 127.5 499 33.1
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 6.0e-27 126.7 326 39.0
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 2.3e-26 124.8 325 38.8
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 5.6e-25 120.2 440 33.0
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 7.3e-25 119.8 589 30.4
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 7.3e-25 119.8 452 33.8
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 2.8e-24 117.9 77 80.5
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.2e-19 102.4 107 52.3
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 2.1e-19 101.7 155 45.8
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.7e-19 101.3 74 74.3
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 4.6e-19 100.5 433 30.9
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 4.6e-19 100.5 433 30.9
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 1.0e-18 99.4 175 43.4
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 5.8e-14 83.6 437 28.1
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 1.7e-13 82.0 357 31.7
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.0e-10 72.8 66 60.6
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 3.3e-09 67.8 105 41.0


User provided reference genes

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