Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 6.1e-71 270.8 143 100.0
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.2e-64 248.4 180 77.8
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 5.5e-64 247.7 174 79.3
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 5.5e-64 247.7 174 79.3
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 2.1e-63 245.7 174 79.3
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 1.8e-59 232.6 174 74.1
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.6e-58 229.6 172 73.3
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 2.6e-58 228.8 172 73.3
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 7.7e-58 227.3 173 72.8
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 3.8e-57 224.9 171 71.9
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 6.5e-57 224.2 172 70.3
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 6.5e-57 224.2 172 72.1
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 8.5e-57 223.8 172 70.9
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 7.2e-56 220.7 172 68.6
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 1.2e-55 219.9 172 66.9
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 2.7e-55 218.8 173 71.1
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 8.0e-55 217.2 172 68.6
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 2.3e-54 215.7 172 69.8
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 2.3e-54 215.7 172 68.0
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 3.0e-54 215.3 172 69.2
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 4.0e-54 214.9 172 69.2
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 4.0e-54 214.9 172 69.2
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 4.0e-54 214.9 172 66.3
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 8.8e-54 213.8 172 66.9
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 8.8e-54 213.8 173 68.2
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.5e-53 213.0 172 68.6
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 2.0e-53 212.6 172 68.0
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 2.6e-53 212.2 172 67.4
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 2.6e-53 212.2 173 67.6
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 2.6e-53 212.2 173 67.1
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 4.4e-53 211.5 172 68.0
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 7.5e-53 210.7 172 66.9
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 7.5e-53 210.7 173 68.8
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 7.5e-53 210.7 172 66.9
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 9.7e-53 210.3 172 66.9
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 1.7e-52 209.5 172 67.4
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 1.7e-52 209.5 173 67.6
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 1.7e-52 209.5 172 65.1
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 2.8e-52 208.8 172 66.3
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 3.7e-52 208.4 173 67.6
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 4.8e-52 208.0 172 65.7
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 6.3e-52 207.6 173 66.5
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 8.2e-52 207.2 172 65.7
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 1.4e-51 206.5 172 64.5
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 1.4e-51 206.5 172 65.7
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 1.8e-51 206.1 172 64.5
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 3.1e-51 205.3 172 64.5
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 3.1e-51 205.3 172 65.1
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 3.1e-51 205.3 171 67.8
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 7.0e-51 204.1 169 64.5
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 9.1e-51 203.8 181 63.0
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 1.2e-50 203.4 172 64.5
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 2.7e-50 202.2 173 63.6
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 3.5e-50 201.8 172 64.5
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 5.9e-50 201.1 172 62.8
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 1.0e-49 200.3 172 64.5
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 3.8e-49 198.4 170 62.9
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 5.0e-49 198.0 193 59.1
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 6.5e-49 197.6 173 65.9
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 8.5e-49 197.2 143 76.9
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 1.1e-48 196.8 173 65.3
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.5e-48 196.4 172 62.2
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 1.9e-48 196.1 173 65.9
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 1.9e-48 196.1 173 65.3
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 3.2e-48 195.3 173 65.3
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 4.2e-48 194.9 166 65.1
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 1.6e-47 193.0 173 65.3
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 2.1e-47 192.6 173 64.7
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 2.7e-47 192.2 173 63.6
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 4.7e-47 191.4 149 70.5
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 8.0e-47 190.7 173 64.2
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 1.4e-46 189.9 173 63.0
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 1.4e-46 189.9 173 63.6
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 2.3e-46 189.1 172 61.0
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 5.2e-46 188.0 150 67.3
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 2.0e-45 186.0 173 60.1
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 2.6e-45 185.7 114 79.8
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 1.3e-44 183.3 144 70.8
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 6.3e-44 181.0 144 68.1
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 8.3e-44 180.6 173 59.0
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 3.1e-43 178.7 114 80.7
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 7.0e-43 177.6 115 78.3
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 1.6e-42 176.4 162 65.4
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 3.5e-42 175.3 133 68.4
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 4.5e-42 174.9 150 64.7
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 7.7e-42 174.1 149 63.8
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 1.3e-41 173.3 146 67.1
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 6.5e-41 171.0 144 66.7
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 6.5e-41 171.0 143 67.1
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 1.6e-39 166.4 165 52.1
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 2.1e-39 166.0 150 64.0
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 2.3e-38 162.5 144 62.5
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 5.2e-38 161.4 165 53.9
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 2.6e-37 159.1 165 50.9
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 2.6e-37 159.1 172 54.7
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 7.5e-37 157.5 113 69.9
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 9.8e-37 157.1 113 76.1
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 9.8e-37 157.1 104 79.8
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 6.3e-36 154.5 165 52.1
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 7.8e-34 147.5 120 70.0
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 1.7e-33 146.4 165 50.3
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.0e-30 137.1 91 75.8
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 3.5e-26 122.1 104 64.4
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 2.3e-25 119.4 95 69.5
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 8.6e-25 117.5 111 59.5
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 1.5e-24 116.7 67 91.0
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 4.7e-23 111.7 115 56.5
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 8.3e-20 100.9 104 57.7
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 8.3e-20 100.9 57 87.7
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 2.7e-18 95.9 97 57.7
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 2.3e-17 92.8 114 50.9
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 6.6e-17 91.3 103 44.7
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 6.6e-17 91.3 128 48.4
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 8.6e-17 90.9 161 39.8
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 1.5e-16 90.1 165 33.3
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 1.2e-15 87.0 177 35.0
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 2.3e-14 82.8 89 55.1
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 3.4e-13 79.0 120 42.5
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 1.7e-12 76.6 42 88.1
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 3.7e-12 75.5 62 67.7
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 9.2e-11 70.9 86 50.0
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.6e-10 70.1 95 47.4
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 6.6e-09 64.7 47 70.2
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 6.2e-07 58.2 83 48.2


User provided reference genes

Program Settings