Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2760 Fragaria x ananassa HOM05D000129 ORTHO05D206686 4.7e-45 184.1 90 100.0
FAN27G3321 Fragaria x ananassa HOM05D000129 ORTHO05D000997 2.3e-15 85.5 41 97.6
FAN15G0647 Fragaria x ananassa HOM05D000129 ORTHO05D000997 1.1e-14 83.2 41 95.1
FvH4_2g32870 Fragaria vesca HOM05D000129 ORTHO05D000997 3.3e-14 81.6 39 97.4
FAN24G2434 Fragaria x ananassa HOM05D000129 ORTHO05D000997 3.3e-14 81.6 39 97.4
RcHm_v2.0_Chr6g0309841 Rosa chinensis HOM05D000129 ORTHO05D000997 2.1e-13 79.0 39 92.3
Ah.11g039390 Amaranthus hybridus HOM05D000129 ORTHO05D000997 1.8e-12 75.9 44 75.0
MD08G1080200 Malus domestica HOM05D000129 ORTHO05D000997 2.4e-12 75.5 39 84.6
MD15G1067300 Malus domestica HOM05D000129 ORTHO05D000997 2.4e-12 75.5 39 84.6
Prupe.1G421100 Prunus persica HOM05D000129 ORTHO05D000997 2.4e-12 75.5 39 84.6
EL10Ac8g19856 Beta vulgaris HOM05D000129 ORTHO05D000997 4.0e-12 74.7 40 82.5
AL1G20820 Arabidopsis lyrata HOM05D000129 ORTHO05D000997 1.2e-11 73.2 40 82.5
AUR62037950 Chenopodium quinoa HOM05D000129 ORTHO05D000997 2.0e-11 72.4 40 77.5
Aa31LG1G4760 Aethionema arabicum HOM05D000129 ORTHO05D000997 3.4e-11 71.6 39 82.1
Thhalv10006682m.g Eutrema salsugineum HOM05D000129 ORTHO05D000997 3.4e-11 71.6 39 82.1
Lj4C73G4 Lonicera japonica HOM05D000129 ORTHO05D000997 3.4e-11 71.6 40 77.5
Atru.chr13.850 Acer truncatum HOM05D000129 ORTHO05D000997 4.4e-11 71.2 39 76.9
Cfa013761 Carpinus fangiana HOM05D000129 ORTHO05D000997 4.4e-11 71.2 44 70.5
Dinv44942 Davidia involucrata HOM05D000129 ORTHO05D000997 4.4e-11 71.2 39 79.5
vmacro22048 Vaccinium macrocarpon HOM05D000129 ORTHO05D000997 4.4e-11 71.2 40 77.5
AT1G10130 Arabidopsis thaliana HOM05D000129 ORTHO05D000997 5.8e-11 70.9 39 82.1
BraA09t41862Z Brassica rapa HOM05D000129 ORTHO05D000997 5.8e-11 70.9 39 79.5
Rhsim07G0219200 Rhododendron simsii HOM05D000129 ORTHO05D000997 5.8e-11 70.9 39 79.5
THA.LOC104816765 Tarenaya hassleriana HOM05D000129 ORTHO05D000997 7.6e-11 70.5 39 79.5
TAR381G0044 Trochodendron aralioides HOM05D000129 ORTHO05D000997 7.6e-11 70.5 39 79.5
CiPaw.07G173500 Carya illinoinensis HOM05D000129 ORTHO05D000997 9.9e-11 70.1 39 79.5
Eucgr.F02237 Eucalyptus grandis HOM05D000129 ORTHO05D000997 9.9e-11 70.1 39 82.1
Gohir.D05G214200 Gossypium hirsutum HOM05D000129 ORTHO05D000997 9.9e-11 70.1 40 77.5
Sp1g08760 Schrenkiella parvula HOM05D000129 ORTHO05D000997 9.9e-11 70.1 39 79.5
COL.COLO4_28481 Corchorus olitorius HOM05D000129 ORTHO05D000997 1.3e-10 69.7 40 77.5
BcaC07g41841 Brassica carinata HOM05D000129 ORTHO05D000997 1.7e-10 69.3 39 76.9
A09p65190 Brassica napus HOM05D000129 ORTHO05D000997 1.7e-10 69.3 39 76.9
C08p49110 Brassica napus HOM05D000129 ORTHO05D000997 1.7e-10 69.3 39 76.9
BolC8t52446H Brassica oleracea HOM05D000129 ORTHO05D000997 1.7e-10 69.3 39 76.9
Nn5g30632 Nelumbo nucifera HOM05D000129 ORTHO05D000997 1.7e-10 69.3 39 76.9
Cc10_g05070 Coffea canephora HOM05D000129 ORTHO05D000997 2.2e-10 68.9 39 76.9
Potri.014G014700 Populus trichocarpa HOM05D000129 ORTHO05D000997 2.9e-10 68.6 39 76.9
Actinidia19583 Actinidia chinensis HOM05D000129 ORTHO05D000997 3.8e-10 68.2 39 79.5
Ciclev10000142m.g Citrus clementina HOM05D000129 ORTHO05D000997 3.8e-10 68.2 39 74.4
CsaV3_2G026010 Cucumis sativus L. HOM05D000129 ORTHO05D000997 3.8e-10 68.2 39 76.9
Gohir.A05G210900 Gossypium hirsutum HOM05D000129 ORTHO05D000997 4.9e-10 67.8 39 76.9
Gorai.009G220900 Gossypium raimondii HOM05D000129 ORTHO05D000997 4.9e-10 67.8 39 76.9
Hma1.2p1_1170F.1_g263330 Hydrangea macrophylla HOM05D000129 ORTHO05D000997 4.9e-10 67.8 39 76.9
SalBow2G1224 Salvia bowleyana HOM05D000129 ORTHO05D000997 4.9e-10 67.8 40 75.0
CANSAT11G2151 Cannabis sativa HOM05D000129 ORTHO05D000997 6.4e-10 67.4 39 76.9
Carub.0001s0954 Capsella rubella HOM05D000129 ORTHO05D000997 6.4e-10 67.4 39 76.9
BolC5t29577H Brassica oleracea HOM05D000129 ORTHO05D000997 8.4e-10 67.0 39 76.9
CSS0014514 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000997 8.4e-10 67.0 39 74.4
Duzib093G1703 Durio zibethinus HOM05D000129 ORTHO05D000997 8.4e-10 67.0 39 76.9
SGA_v2.0_scaffold152G36819 Striga asiatica HOM05D000129 ORTHO05D000997 8.4e-10 67.0 39 74.4
Aqoxy6G02557 Aquilegia oxysepala HOM05D000129 ORTHO05D000997 1.1e-09 66.6 39 76.9
CDE01G0220 Ceratophyllum demersum HOM05D000129 ORTHO05D000997 1.1e-09 66.6 45 68.9
Glyma.04G046700 Glycine max HOM05D000129 ORTHO05D000997 1.1e-09 66.6 39 74.4
Sabra14G0008800 Salix brachista HOM05D000129 ORTHO05D000997 1.1e-09 66.6 81 48.1
Hund02410 Selenicereus undatus HOM05D000129 ORTHO05D000997 1.4e-09 66.2 39 71.8
A06p06780 Brassica napus HOM05D000129 ORTHO05D000997 1.9e-09 65.9 40 75.0
Lj1g0005699 Lotus japonicus HOM05D000129 ORTHO05D000997 1.9e-09 65.9 39 71.8
arahy.Tifrunner.gnm1.ann1.2ZDN53 Arachis hypogaea HOM05D000129 ORTHO05D000997 2.4e-09 65.5 41 73.2
arahy.Tifrunner.gnm1.ann1.NRZN5K Arachis hypogaea HOM05D000129 ORTHO05D000997 2.4e-09 65.5 41 73.2
Thecc.08G086700 Theobroma cacao HOM05D000129 ORTHO05D000997 2.4e-09 65.5 39 74.4
ECA232G0094 Erigeron canadensis HOM05D000129 ORTHO05D000997 3.2e-09 65.1 40 70.0
Phvul.009G072800 Phaseolus vulgaris HOM05D000129 ORTHO05D000997 3.2e-09 65.1 39 74.4
Potri.002G117400 Populus trichocarpa HOM05D000129 ORTHO05D000997 3.2e-09 65.1 39 71.8
GSVIVG01009320001 Vitis vinifera HOM05D000129 ORTHO05D000997 3.2e-09 65.1 39 71.8
PSO541G1994 Papaver somniferum HOM05D000129 ORTHO05D000997 5.4e-09 64.3 39 71.8
PSO675G3743 Papaver somniferum HOM05D000129 ORTHO05D000997 5.4e-09 64.3 39 71.8
VMungo1309G1806 Vigna mungo HOM05D000129 ORTHO05D000997 7.1e-09 63.9 39 71.8
BraA06t23893Z Brassica rapa HOM05D000129 ORTHO05D000997 9.3e-09 63.5 39 74.4
Os03g0730800 Oryza sativa ssp. japonica HOM05D000129 ORTHO05D000997 1.2e-08 63.2 39 71.8
Zm00001eb056130 Zea mays HOM05D000129 ORTHO05D000997 1.2e-08 63.2 39 71.8
AUR62036019 Chenopodium quinoa HOM05D000129 ORTHO05D000997 1.6e-08 62.8 39 69.2
Lsat_1_v5_gn_9_76580 Lactuca sativa HOM05D000129 ORTHO05D000997 2.1e-08 62.4 39 69.2
Sed0025438 Sechium edule HOM05D000129 ORTHO05D000997 2.1e-08 62.4 39 66.7
CAN.G674.46 Capsicum annuum HOM05D000129 ORTHO05D000997 3.5e-08 61.6 39 66.7
Ca_15897_v3 Cicer arietinum L. HOM05D000129 ORTHO05D000997 3.5e-08 61.6 39 69.2
Lalb_Chr23g0267561 Lupinus albus HOM05D000129 ORTHO05D000997 4.6e-08 61.2 39 71.8
Sopen07g012030 Solanum pennellii HOM05D000129 ORTHO05D000997 4.6e-08 61.2 39 66.7
HPP92_027954 Vanilla planifolia HOM05D000129 ORTHO05D000997 4.6e-08 61.2 39 69.2
HanXRQChr12g0368611 Helianthus annuus HOM05D000129 ORTHO05D000997 6.0e-08 60.8 39 69.2
Manes.18G047600 Manihot esculenta HOM05D000129 ORTHO05D000997 6.0e-08 60.8 39 69.2
ATR0739G155 Amborella trichopoda HOM05D000129 ORTHO05D000997 2.3e-07 58.9 39 69.2
DCAR_027593 Daucus carota HOM05D000129 ORTHO05D000997 3.0e-07 58.5 70 45.7
Psat5g037840 Pisum sativum HOM05D000129 ORTHO05D000997 5.1e-07 57.8 39 64.1
Psat2g063360 Pisum sativum HOM05D004963 ORTHO05D006638 6.6e-07 57.4 39 61.5
SEGI_00929 Sequoiadendron giganteum HOM05D000129 ORTHO05D000997 1.1e-06 56.6 39 64.1
C05p08260 Brassica napus HOM05D000129 ORTHO05D000997 9.6e-06 53.5 30 76.7
MELO3C010795.2 Cucumis melo HOM05D000129 ORTHO05D000997 9.6e-06 53.5 29 82.8


User provided reference genes

Program Settings