Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2754 Fragaria x ananassa HOM05D014836 ORTHO05D017926 1.7e-91 339.3 174 100.0
FAN27G2046 Fragaria x ananassa HOM05D014836 ORTHO05D017926 3.5e-89 331.6 174 98.3
FAN15G0677 Fragaria x ananassa HOM05D014836 ORTHO05D017926 2.5e-63 245.7 180 77.2
RcHm_v2.0_Chr6g0297171 Rosa chinensis HOM05D014836 ORTHO05D001784 7.4e-63 244.2 196 76.5
FvH4_2g28260 Fragaria vesca HOM05D014836 ORTHO05D017926 3.1e-53 212.2 187 66.8
FAN24G2494 Fragaria x ananassa HOM05D014836 ORTHO05D017926 3.1e-53 212.2 187 66.8
FvH4_1g16040 Fragaria vesca HOM05D014836 ORTHO05D017926 1.3e-43 180.3 117 83.8
FAN19G1757 Fragaria x ananassa HOM05D014836 ORTHO05D017926 1.5e-42 176.8 114 84.2
FvH4_6g47730 Fragaria vesca HOM05D014836 ORTHO05D017926 5.5e-42 174.9 117 82.9
FvH4_7g24010 Fragaria vesca HOM05D014836 ORTHO05D017926 1.9e-34 149.8 100 82.0
Prupe.1G486800 Prunus persica HOM05D001921 ORTHO05D001784 5.0e-27 125.2 187 53.5
Prupe.1G486700 Prunus persica HOM05D001921 ORTHO05D001784 1.6e-25 120.2 185 51.9
MD15G1131400 Malus domestica HOM05D001921 ORTHO05D001784 1.2e-20 104.0 202 47.0
CiPaw.08G008000 Carya illinoinensis HOM05D001921 ORTHO05D001784 8.6e-19 97.8 188 41.5
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 9.5e-18 94.4 183 44.3
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 7.5e-15 84.7 201 41.3
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 9.8e-15 84.3 181 39.2
Rhsim02G0206800 Rhododendron simsii HOM05D001921 ORTHO05D001784 2.9e-14 82.8 178 40.4
Gohir.D07G034600 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.9e-14 82.0 186 39.2
Potri.018G022400 Populus trichocarpa HOM05D001921 ORTHO05D001784 1.8e-13 80.1 185 40.5
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 1.8e-13 80.1 181 40.9
CiPaw.07G227300 Carya illinoinensis HOM05D001921 ORTHO05D001784 2.4e-13 79.7 178 42.1
Sabra18G0025100 Salix brachista HOM05D001921 ORTHO05D001784 2.4e-13 79.7 182 39.6
TWI63G0810 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.4e-13 79.7 192 36.5
CARHR239920 Cardamine hirsuta HOM05D001921 ORTHO05D001784 4.1e-13 79.0 198 35.9
C07p59050 Brassica napus HOM05D001921 ORTHO05D001784 5.4e-13 78.6 196 38.8
Cpa.g.sc127.3 Carica papaya HOM05D001921 ORTHO05D001784 7.0e-13 78.2 182 40.1
Dinv03420 Davidia involucrata HOM05D001921 ORTHO05D001784 1.2e-12 77.4 187 37.4
Cfa013095 Carpinus fangiana HOM05D001921 ORTHO05D001784 2.7e-12 76.3 178 39.3
Cfa013096 Carpinus fangiana HOM05D001921 ORTHO05D001784 2.7e-12 76.3 179 39.1
Thhalv10026353m.g Eutrema salsugineum HOM05D001921 ORTHO05D001784 3.5e-12 75.9 195 37.9
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 3.5e-12 75.9 186 39.2
Gorai.001G036300 Gossypium raimondii HOM05D001921 ORTHO05D001784 4.6e-12 75.5 186 38.2
FvH4_7g22490 Fragaria vesca HOM05D031311 ORTHO05D020609 6.0e-12 75.1 196 39.3
BraA03t15157Z Brassica rapa HOM05D001921 ORTHO05D001784 7.8e-12 74.7 187 37.4
BolC7t46353H Brassica oleracea HOM05D001921 ORTHO05D001784 1.7e-11 73.6 199 37.7
A03p61190 Brassica napus HOM05D001921 ORTHO05D001784 2.3e-11 73.2 188 36.7
Sp7g29820 Schrenkiella parvula HOM05D001921 ORTHO05D001784 2.3e-11 73.2 197 35.5
Duzib168G1630 Durio zibethinus HOM05D001921 ORTHO05D001784 3.0e-11 72.8 187 38.5
Atru.chr7.2506 Acer truncatum HOM05D001921 ORTHO05D001784 3.9e-11 72.4 217 36.4
THA.LOC104804502 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 6.6e-11 71.6 170 36.5
Carub.0007s0853 Capsella rubella HOM05D001921 ORTHO05D001784 8.6e-11 71.2 208 31.2
Haze_21453 Corylus avellana HOM05D001921 ORTHO05D001784 1.5e-10 70.5 171 36.3
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.9e-10 70.1 183 40.4
AL7G19870 Arabidopsis lyrata HOM05D001921 ORTHO05D001784 2.5e-10 69.7 184 34.8
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.5e-10 69.7 182 40.7
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 3.3e-10 69.3 193 39.4
Glyma.06G064500 Glycine max HOM05D001921 ORTHO05D001784 3.3e-10 69.3 177 36.7
Sabra06G0203000 Salix brachista HOM05D001921 ORTHO05D001784 4.3e-10 68.9 193 39.9
SabraUnG0005100 Salix brachista HOM05D001921 ORTHO05D001784 5.6e-10 68.6 193 39.9
TWI32G1277 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 5.6e-10 68.6 205 38.5
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 7.3e-10 68.2 183 41.0
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 7.3e-10 68.2 201 34.8
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 9.5e-10 67.8 181 37.0
Potri.006G260000 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.8e-09 66.2 182 36.3
Actinidia38704 Actinidia chinensis HOM05D001921 ORTHO05D001784 3.6e-09 65.9 144 38.9
VMungo1309G2915 Vigna mungo HOM05D001921 ORTHO05D001784 4.7e-09 65.5 183 32.8
Glyma.04G063200 Glycine max HOM05D001921 ORTHO05D001784 8.0e-09 64.7 186 36.6
Oeu012641.1 Olea europaea HOM05D001921 ORTHO05D001784 1.4e-08 63.9 190 36.8
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 1.8e-08 63.5 176 34.7
DCAR_023282 Daucus carota HOM05D001921 ORTHO05D001784 5.2e-08 62.0 183 36.6
FAN03G1442 Fragaria x ananassa HOM05D031311 ORTHO05D020609 6.8e-08 61.6 198 34.3
ATR0580G129 Amborella trichopoda HOM05D001921 ORTHO05D001784 8.9e-08 61.2 181 34.8
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 8.9e-08 61.2 190 35.8
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 8.9e-08 61.2 188 36.7
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 2.0e-07 60.1 184 32.6
A01p06280 Brassica napus HOM05D001921 ORTHO05D001784 2.6e-07 59.7 206 33.5
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 2.6e-07 59.7 179 35.2
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 2.6e-07 59.7 186 34.4
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 2.6e-07 59.7 186 34.4
MD15G1158100 Malus domestica HOM05D001921 ORTHO05D001784 4.4e-07 58.9 201 32.3
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 5.8e-07 58.5 164 34.8
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 5.8e-07 58.5 177 35.0
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 5.8e-07 58.5 184 34.8
AT4G32020 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 7.5e-07 58.2 182 32.4
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 7.5e-07 58.2 166 36.7
Haze_21460 Corylus avellana HOM05D001921 ORTHO05D001784 9.8e-07 57.8 115 45.2
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 9.8e-07 57.8 200 33.0
ClCG11G003650 Citrullus lanatus HOM05D001921 ORTHO05D001784 1.7e-06 57.0 196 30.1
FAN06G2457 Fragaria x ananassa HOM05D031311 ORTHO05D020609 1.7e-06 57.0 166 33.7
FAN06G4915 Fragaria x ananassa HOM05D031311 ORTHO05D020609 1.7e-06 57.0 166 33.7
Aa31sc859G10 Aethionema arabicum HOM05D001921 ORTHO05D001784 2.2e-06 56.6 198 28.8
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 2.2e-06 56.6 189 34.9
Aa31LG2G18040 Aethionema arabicum HOM05D001921 ORTHO05D001784 2.9e-06 56.2 188 29.3
COL.COLO4_18732 Corchorus olitorius HOM05D001921 ORTHO05D001784 2.9e-06 56.2 174 34.5
Sc14g0000060 Simmondsia chinensis HOM05D001921 ORTHO05D001784 2.9e-06 56.2 170 33.5
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 2.9e-06 56.2 190 32.1
Haze_21461 Corylus avellana HOM05D001921 ORTHO05D001784 3.7e-06 55.8 173 37.6
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 3.7e-06 55.8 188 34.0
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 3.7e-06 55.8 90 45.6
Lalb_Chr08g0244291 Lupinus albus HOM05D001921 ORTHO05D001784 3.7e-06 55.8 176 34.7
Sc23g0006510 Simmondsia chinensis HOM05D001921 ORTHO05D001784 3.7e-06 55.8 175 31.4
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 4.9e-06 55.5 188 34.0
THA.LOC104820224 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 4.9e-06 55.5 172 31.4
FAN23G0500 Fragaria x ananassa HOM05D001921 ORTHO05D001784 8.3e-06 54.7 187 35.3
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 8.3e-06 54.7 188 34.0
Phvul.009G089600 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 8.3e-06 54.7 184 31.5


User provided reference genes

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