Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2654 Fragaria x ananassa HOM05D000018 ORTHO05D202336 9.6e-59 229.9 115 100.0
FvH4_2g27140 Fragaria vesca HOM05D000018 ORTHO05D001440 1.1e-25 120.2 62 90.3
FAN24G3184 Fragaria x ananassa HOM05D000312 ORTHO05D000221 1.1e-25 120.2 62 90.3
FAN15G1531 Fragaria x ananassa HOM05D000018 ORTHO05D001440 8.7e-20 100.5 62 71.0
FAN27G1721 Fragaria x ananassa HOM05D000018 ORTHO05D001440 1.1e-19 100.1 62 71.0
FvH4_2g30010 Fragaria vesca HOM05D000018 ORTHO05D001440 1.5e-19 99.8 62 71.0
FAN24G1035 Fragaria x ananassa HOM05D000018 ORTHO05D001440 1.5e-19 99.8 62 71.0
RcHm_v2.0_Chr1g0337591 Rosa chinensis HOM05D000018 ORTHO05D001440 7.9e-13 77.4 60 63.3
MD15G1116300 Malus domestica HOM05D000018 ORTHO05D001440 4.8e-10 68.2 61 52.5
FAN20G1349 Fragaria x ananassa HOM05D000018 ORTHO05D001440 6.3e-10 67.8 63 50.8
FvH4_2g30040 Fragaria vesca HOM05D000018 ORTHO05D001440 1.8e-09 66.2 62 54.8
GSVIVG01035796001 Vitis vinifera HOM05D000018 ORTHO05D001440 1.8e-09 66.2 89 43.8
FAN20G1663 Fragaria x ananassa HOM05D000018 ORTHO05D001440 2.4e-09 65.9 62 53.2
FAN24G1832 Fragaria x ananassa HOM05D000018 ORTHO05D001440 2.4e-09 65.9 62 53.2
RcHm_v2.0_Chr6g0312151 Rosa chinensis HOM05D000018 ORTHO05D001440 2.4e-09 65.9 61 52.5
FAN15G2442 Fragaria x ananassa HOM05D000018 ORTHO05D001440 3.1e-09 65.5 63 49.2
FvH4_2g30020 Fragaria vesca HOM05D000018 ORTHO05D001440 4.1e-09 65.1 63 49.2
Dinv36592 Davidia involucrata HOM05D000018 ORTHO05D001440 5.3e-09 64.7 86 47.7
MD08G1138400 Malus domestica HOM05D000018 ORTHO05D001440 6.9e-09 64.3 61 52.5
Potri.018G033600 Populus trichocarpa HOM05D000018 ORTHO05D001440 1.2e-08 63.5 88 37.5
CANSAT54G0876 Cannabis sativa HOM05D000018 ORTHO05D001440 1.5e-08 63.2 87 44.8
Thecc.09G117300 Theobroma cacao HOM05D000018 ORTHO05D001440 1.5e-08 63.2 70 48.6
FvH4_2g30021 Fragaria vesca HOM05D000018 ORTHO05D001440 3.4e-08 62.0 61 50.8
Atru.chr7.2221 Acer truncatum HOM05D000018 ORTHO05D001440 4.5e-08 61.6 61 49.2
Atru.chr7.2340 Acer truncatum HOM05D000018 ORTHO05D001440 4.5e-08 61.6 61 49.2
CANSAT56G3014 Cannabis sativa HOM05D000018 ORTHO05D001440 5.9e-08 61.2 87 46.0
PGR044G0945 Punica granatum HOM05D000018 ORTHO05D001440 5.9e-08 61.2 88 39.8
Sed0024037 Sechium edule HOM05D000018 ORTHO05D001440 5.9e-08 61.2 62 51.6
Cpa.g.sc91.25 Carica papaya HOM05D000018 ORTHO05D001440 7.7e-08 60.8 62 46.8
FAN20G0847 Fragaria x ananassa HOM05D000018 ORTHO05D001440 7.7e-08 60.8 61 50.8
Gohir.D08G260900 Gossypium hirsutum HOM05D000018 ORTHO05D001440 7.7e-08 60.8 88 39.8
Gorai.004G279000 Gossypium raimondii HOM05D000018 ORTHO05D001440 7.7e-08 60.8 88 39.8
MD15G1145200 Malus domestica HOM05D000018 ORTHO05D001440 7.7e-08 60.8 87 42.5
RcHm_v2.0_Chr6g0312861 Rosa chinensis HOM05D000018 ORTHO05D001440 7.7e-08 60.8 89 41.6
QL12p031468 Quercus lobata HOM05D000018 ORTHO05D001440 1.0e-07 60.5 61 47.5
ClCG08G012950 Citrullus lanatus HOM05D000018 ORTHO05D001440 1.3e-07 60.1 88 37.5
COL.COLO4_34951 Corchorus olitorius HOM05D000018 ORTHO05D001440 1.3e-07 60.1 70 45.7
Duzib187G0376 Durio zibethinus HOM05D000018 ORTHO05D001440 1.7e-07 59.7 90 42.2
RcHm_v2.0_Chr1g0337611 Rosa chinensis HOM05D000018 ORTHO05D001440 1.7e-07 59.7 61 49.2
MELO3C030311.2 Cucumis melo HOM05D000018 ORTHO05D001440 2.2e-07 59.3 62 50.0
Eucgr.C02855 Eucalyptus grandis HOM05D000018 ORTHO05D001440 2.2e-07 59.3 89 37.1
TWI34G1100 Tripterygium wilfordii HOM05D000018 ORTHO05D001440 2.2e-07 59.3 88 42.0
Cfa021485 Carpinus fangiana HOM05D000018 ORTHO05D001440 2.9e-07 58.9 88 35.2
MELO3C011218.2 Cucumis melo HOM05D000018 ORTHO05D001440 3.8e-07 58.5 88 37.5
CsaV3_2G031670 Cucumis sativus L. HOM05D000018 ORTHO05D001440 3.8e-07 58.5 88 38.6
Sc23g0006990 Simmondsia chinensis HOM05D000018 ORTHO05D001440 3.8e-07 58.5 47 53.2
Solyc05g052740.1 Solanum lycopersicum HOM05D000018 ORTHO05D001440 3.8e-07 58.5 61 45.9
Sopen05g031260 Solanum pennellii HOM05D000018 ORTHO05D001440 3.8e-07 58.5 61 45.9
CiPaw.07G218300 Carya illinoinensis HOM05D000018 ORTHO05D001440 5.0e-07 58.2 88 38.6
Ciclev10010629m.g Citrus clementina HOM05D000018 ORTHO05D001440 5.0e-07 58.2 61 49.2
Haze_21610 Corylus avellana HOM05D000018 ORTHO05D001440 5.0e-07 58.2 88 34.1
Dinv30203 Davidia involucrata HOM05D000018 ORTHO05D001440 5.0e-07 58.2 87 39.1
Eucgr.C02844 Eucalyptus grandis HOM05D000018 ORTHO05D001440 5.0e-07 58.2 89 36.0
PGSC0003DMG400035710 Solanum tuberosum HOM05D000018 ORTHO05D001440 5.0e-07 58.2 61 45.9
CSS0011799 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001440 6.5e-07 57.8 89 41.6
FvH4_1g04200 Fragaria vesca HOM05D000018 ORTHO05D001440 6.5e-07 57.8 87 43.7
Sopen01g023740 Solanum pennellii HOM05D000018 ORTHO05D001440 6.5e-07 57.8 61 47.5
CDE06G1023 Ceratophyllum demersum HOM05D000018 ORTHO05D001440 8.5e-07 57.4 63 49.2
QL02p086468 Quercus lobata HOM05D000018 ORTHO05D001440 8.5e-07 57.4 87 43.7
TAR625G0779 Trochodendron aralioides HOM05D000018 ORTHO05D001440 8.5e-07 57.4 87 39.1
VMungo1309G1364 Vigna mungo HOM05D000018 ORTHO05D001440 8.5e-07 57.4 61 45.9
Atru.chr7.1276 Acer truncatum HOM05D000018 ORTHO05D001440 1.1e-06 57.0 59 54.2
CDE07G1049 Ceratophyllum demersum HOM05D000018 ORTHO05D001440 1.1e-06 57.0 63 49.2
CsaV3_2G031680 Cucumis sativus L. HOM05D000018 ORTHO05D001440 1.1e-06 57.0 62 48.4
Duzib187G1495 Durio zibethinus HOM05D000018 ORTHO05D001440 1.1e-06 57.0 88 42.0
Sed0016114 Sechium edule HOM05D000018 ORTHO05D001440 1.1e-06 57.0 88 39.8
Ca_12914_v3 Cicer arietinum L. HOM05D000018 ORTHO05D001440 1.4e-06 56.6 90 35.6
Eucgr.C02840 Eucalyptus grandis HOM05D000018 ORTHO05D001440 1.4e-06 56.6 89 33.7
Gohir.A08G240300 Gossypium hirsutum HOM05D000018 ORTHO05D001440 1.4e-06 56.6 88 37.5
Medtr1g011580 Medicago truncatula HOM05D000018 ORTHO05D001440 1.4e-06 56.6 90 36.7
Prupe.7G235400 Prunus persica HOM05D000018 ORTHO05D001440 1.4e-06 56.6 87 41.4
HPP92_000673 Vanilla planifolia HOM05D000018 ORTHO05D001440 1.4e-06 56.6 88 36.4
CSS0039029 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001440 1.9e-06 56.2 89 40.4
Phvul.009G097200 Phaseolus vulgaris HOM05D000018 ORTHO05D001440 1.9e-06 56.2 61 44.3
RcHm_v2.0_Chr2g0089681 Rosa chinensis HOM05D000018 ORTHO05D001440 1.9e-06 56.2 61 49.2
Solyc01g058250.2 Solanum lycopersicum HOM05D000018 ORTHO05D001440 1.9e-06 56.2 61 45.9
PSO063G7314 Papaver somniferum HOM05D000018 ORTHO05D001440 2.5e-06 55.8 61 47.5
PSO782G1625 Papaver somniferum HOM05D000018 ORTHO05D001440 2.5e-06 55.8 61 47.5
Peaxi162Scf00957g00022 Petunia axillaris HOM05D000018 ORTHO05D001440 2.5e-06 55.8 61 45.9
Psat6g030840 Pisum sativum HOM05D000018 ORTHO05D001440 2.5e-06 55.8 90 36.7
CAN.G503.9 Capsicum annuum HOM05D000018 ORTHO05D001440 3.2e-06 55.5 61 44.3
COL.COLO4_24045 Corchorus olitorius HOM05D000018 ORTHO05D001440 3.2e-06 55.5 89 43.8
FAN19G2461 Fragaria x ananassa HOM05D000018 ORTHO05D001440 3.2e-06 55.5 87 42.5
Glyma.06G072600 Glycine max HOM05D000018 ORTHO05D001440 3.2e-06 55.5 61 44.3
Phvul.009G097100 Phaseolus vulgaris HOM05D000018 ORTHO05D001440 3.2e-06 55.5 63 44.4
Sabra18G0034500 Salix brachista HOM05D000018 ORTHO05D001440 3.2e-06 55.5 88 34.1
PGSC0003DMG400029063 Solanum tuberosum HOM05D000018 ORTHO05D001440 3.2e-06 55.5 61 45.9
HPP92_021803 Vanilla planifolia HOM05D000018 ORTHO05D001440 3.2e-06 55.5 88 39.8
Eucgr.C02851 Eucalyptus grandis HOM05D000018 ORTHO05D001440 4.2e-06 55.1 89 33.7
FAN23G1604 Fragaria x ananassa HOM05D000018 ORTHO05D001440 4.2e-06 55.1 87 43.7
Glyma.17G205300 Glycine max HOM05D000018 ORTHO05D001440 4.2e-06 55.1 89 36.0
Lj5g0018669 Lotus japonicus HOM05D000018 ORTHO05D001440 4.2e-06 55.1 86 38.4
Cfa003302 Carpinus fangiana HOM05D000103 ORTHO05D000049 5.5e-06 54.7 87 39.1
Glyma.04G071000 Glycine max HOM05D000018 ORTHO05D001440 5.5e-06 54.7 61 45.9
Gohir.A07G038400 Gossypium hirsutum HOM05D000018 ORTHO05D001440 5.5e-06 54.7 62 45.2
Lsat_1_v5_gn_1_43140 Lactuca sativa HOM05D000018 ORTHO05D001440 5.5e-06 54.7 87 40.2
Lalb_Chr24g0402291 Lupinus albus HOM05D000018 ORTHO05D001440 5.5e-06 54.7 88 35.2
Sed0008943 Sechium edule HOM05D000018 ORTHO05D001440 5.5e-06 54.7 62 48.4
Sed0019298 Sechium edule HOM05D000018 ORTHO05D001440 5.5e-06 54.7 62 48.4
Solyc02g038808.1 Solanum lycopersicum HOM05D000018 ORTHO05D001440 5.5e-06 54.7 61 44.3
Sopen02g012520 Solanum pennellii HOM05D000018 ORTHO05D001440 5.5e-06 54.7 61 44.3
Ciclev10010731m.g Citrus clementina HOM05D000018 ORTHO05D001440 7.2e-06 54.3 85 43.5
Gohir.D07G042500 Gossypium hirsutum HOM05D000018 ORTHO05D001440 7.2e-06 54.3 62 43.5
Gorai.001G045500 Gossypium raimondii HOM05D000018 ORTHO05D001440 7.2e-06 54.3 62 43.5
Hma1.2p1_0129F.1_g060100 Hydrangea macrophylla HOM05D000018 ORTHO05D001440 7.2e-06 54.3 88 36.4
PGSC0003DMG400023158 Solanum tuberosum HOM05D000018 ORTHO05D001440 7.2e-06 54.3 61 42.6
Oeu034201.1 Olea europaea HOM05D000018 ORTHO05D001440 9.4e-06 53.9 61 49.2
TAR383G0123 Trochodendron aralioides HOM05D000018 ORTHO05D001440 9.4e-06 53.9 61 45.9


User provided reference genes

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