Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2616 Fragaria x ananassa HOM05D000143 ORTHO05D019130 5.6e-59 230.7 115 100.0
FAN27G0911 Fragaria x ananassa HOM05D000143 ORTHO05D019130 3.1e-33 145.2 71 100.0
FvH4_2g14850 Fragaria vesca HOM05D000143 ORTHO05D019130 2.0e-32 142.5 72 97.2
FAN24G1654 Fragaria x ananassa HOM05D000143 ORTHO05D019130 2.0e-32 142.5 72 97.2
FAN15G0252 Fragaria x ananassa HOM05D000143 ORTHO05D019130 1.3e-31 139.8 72 95.8
RcHm_v2.0_Chr6g0277421 Rosa chinensis HOM05D000143 ORTHO05D019130 6.3e-18 94.4 64 73.4
MD05G1012300 Malus domestica HOM05D000143 ORTHO05D019130 2.0e-08 62.8 73 49.3
PGR042G0789 Punica granatum HOM05D000143 ORTHO05D000072 2.6e-08 62.4 76 46.1
Actinidia14021 Actinidia chinensis HOM05D000143 ORTHO05D000072 3.4e-08 62.0 54 57.4
CSS0018035 Camellia sinensis var. sinensis HOM05D000143 ORTHO05D000072 3.4e-08 62.0 50 60.0
Rhsim10G0083700 Rhododendron simsii HOM05D000143 ORTHO05D000072 4.5e-08 61.6 50 58.0
arahy.Tifrunner.gnm1.ann1.9QS057 Arachis hypogaea HOM05D000143 ORTHO05D000072 2.2e-07 59.3 76 42.1
vmacro00897 Vaccinium macrocarpon HOM05D000143 ORTHO05D000072 2.9e-07 58.9 52 53.8
Dinv25796 Davidia involucrata HOM05D000143 ORTHO05D000072 3.8e-07 58.5 50 56.0
Eucgr.F02749 Eucalyptus grandis HOM05D000143 ORTHO05D000072 3.8e-07 58.5 50 56.0
DCAR_014408 Daucus carota HOM05D000143 ORTHO05D000072 5.0e-07 58.2 64 48.4
Lj4A690G47 Lonicera japonica HOM05D000143 ORTHO05D000072 5.0e-07 58.2 72 44.4
Phvul.001G064300 Phaseolus vulgaris HOM05D000143 ORTHO05D000072 5.0e-07 58.2 50 56.0
Prupe.8G017500 Prunus persica HOM05D000143 ORTHO05D019130 5.0e-07 58.2 80 43.8
Prupe.8G017400 Prunus persica HOM05D000143 ORTHO05D000072 6.5e-07 57.8 50 58.0
vmacro05470 Vaccinium macrocarpon HOM05D000143 ORTHO05D000072 6.5e-07 57.8 73 45.2
FAN15G1308 Fragaria x ananassa HOM05D000143 ORTHO05D000072 8.5e-07 57.4 50 54.0
Haze_17692 Corylus avellana HOM05D000143 ORTHO05D000072 1.1e-06 57.0 50 54.0
Migut.C01104 Erythranthe guttata HOM05D000143 ORTHO05D000072 1.1e-06 57.0 50 52.0
FvH4_2g14860 Fragaria vesca HOM05D000143 ORTHO05D000072 1.1e-06 57.0 50 54.0
FAN20G2038 Fragaria x ananassa HOM05D000143 ORTHO05D000072 1.1e-06 57.0 50 54.0
FAN24G2182 Fragaria x ananassa HOM05D000143 ORTHO05D000072 1.1e-06 57.0 50 54.0
FAN27G3444 Fragaria x ananassa HOM05D000143 ORTHO05D000072 1.1e-06 57.0 50 54.0
Hma1.2p1_0107F.1_g051360 Hydrangea macrophylla HOM05D000143 ORTHO05D000072 1.1e-06 57.0 50 54.0
Lj7A363T56 Lonicera japonica HOM05D000143 ORTHO05D000072 1.1e-06 57.0 54 53.7
RcHm_v2.0_Chr6g0277441 Rosa chinensis HOM05D000143 ORTHO05D000072 1.1e-06 57.0 50 56.0
Duzib041G0025 Durio zibethinus HOM05D000143 ORTHO05D000072 1.4e-06 56.6 50 56.0
SGA_v2.0_scaffold48G17933 Striga asiatica HOM05D000143 ORTHO05D000072 1.4e-06 56.6 50 54.0
arahy.Tifrunner.gnm1.ann1.3965TZ Arachis hypogaea HOM05D000143 ORTHO05D000072 1.9e-06 56.2 76 40.8
CiPaw.04G126500 Carya illinoinensis HOM05D000143 ORTHO05D000072 1.9e-06 56.2 50 54.0
CiPaw.04G126700 Carya illinoinensis HOM05D000143 ORTHO05D000072 1.9e-06 56.2 50 54.0
Hma1.2p1_0655F.1_g196740 Hydrangea macrophylla HOM05D000143 ORTHO05D000072 1.9e-06 56.2 47 57.4
VMungo0647G0570 Vigna mungo HOM05D000143 ORTHO05D000072 1.9e-06 56.2 50 54.0
MSTRG.1379 Avicennia marina HOM05D000143 ORTHO05D000072 2.5e-06 55.8 50 54.0
CANSAT25G0993 Cannabis sativa HOM05D000143 ORTHO05D000072 2.5e-06 55.8 50 54.0
Cfa018380 Carpinus fangiana HOM05D000143 ORTHO05D000072 2.5e-06 55.8 50 52.0
Glyma.13G037900 Glycine max HOM05D000143 ORTHO05D000072 3.2e-06 55.5 50 52.0
Nitab4.5_0000445g0170 Nicotiana tabacum HOM05D000143 ORTHO05D000072 3.2e-06 55.5 47 57.4
SGA_v2.0_scaffold24G10387 Striga asiatica HOM05D000143 ORTHO05D000072 3.2e-06 55.5 50 52.0
TAR628G0612 Trochodendron aralioides HOM05D000143 ORTHO05D000072 3.2e-06 55.5 50 54.0
CAN.G2.55 Capsicum annuum HOM05D000143 ORTHO05D000072 4.2e-06 55.1 50 56.0
Lj1g0002545 Lotus japonicus HOM05D000143 ORTHO05D000072 4.2e-06 55.1 54 50.0
Oeu045998.1 Olea europaea HOM05D000143 ORTHO05D000072 4.2e-06 55.1 50 50.0
Peaxi162Scf00263g00161 Petunia axillaris HOM05D000143 ORTHO05D000072 4.2e-06 55.1 50 54.0
unitig_0.g622 Utricularia gibba HOM05D000143 ORTHO05D000072 4.2e-06 55.1 54 48.1
Nn1g06253 Nelumbo nucifera HOM05D000143 ORTHO05D000072 5.5e-06 54.7 50 50.0
Nitab4.5_0007236g0030 Nicotiana tabacum HOM05D000143 ORTHO05D000072 5.5e-06 54.7 43 60.5
QL09p028826 Quercus lobata HOM05D000143 ORTHO05D000072 5.5e-06 54.7 53 50.9
QL09p028860 Quercus lobata HOM05D000143 ORTHO05D000072 5.5e-06 54.7 53 50.9
QL09p028928 Quercus lobata HOM05D000143 ORTHO05D000072 5.5e-06 54.7 53 50.9
SalBow7G2698 Salvia bowleyana HOM05D000143 ORTHO05D000072 5.5e-06 54.7 44 54.5
DCAR_001112 Daucus carota HOM05D000143 ORTHO05D000072 7.2e-06 54.3 47 53.2
DCAR_001113 Daucus carota HOM05D000143 ORTHO05D000072 7.2e-06 54.3 47 53.2
MD05G1012200 Malus domestica HOM05D000143 ORTHO05D000072 7.2e-06 54.3 44 59.1
Nn1g06251 Nelumbo nucifera HOM05D000143 ORTHO05D000072 7.2e-06 54.3 50 48.0
ECA247G1431 Erigeron canadensis HOM05D008205 ORTHO05D003386 9.4e-06 53.9 50 46.0
Gohir.D02G073500 Gossypium hirsutum HOM05D000143 ORTHO05D000072 9.4e-06 53.9 50 52.0
Gorai.005G082900 Gossypium raimondii HOM05D000143 ORTHO05D000072 9.4e-06 53.9 50 52.0


User provided reference genes

Program Settings