Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 9.7e-32 139.4 66 100.0
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 6.3e-31 136.7 65 98.5
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 6.3e-31 136.7 65 98.5
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 2.9e-28 127.9 66 90.9
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 1.7e-23 112.1 54 94.4
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 8.3e-23 109.8 65 75.4
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 8.3e-23 109.8 54 90.7
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 1.1e-22 109.4 54 90.7
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 1.4e-22 109.0 61 78.7
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 1.4e-22 109.0 62 77.4
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 1.8e-22 108.6 56 85.7
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.8e-22 108.6 55 89.1
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 2.4e-22 108.2 54 88.9
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 2.4e-22 108.2 54 88.9
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 2.4e-22 108.2 57 84.2
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 2.4e-22 108.2 54 88.9
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 4.1e-22 107.5 61 77.0
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 4.1e-22 107.5 55 87.3
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 4.1e-22 107.5 56 83.9
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 5.4e-22 107.1 59 74.6
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 5.4e-22 107.1 54 88.9
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 7.0e-22 106.7 56 83.9
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 7.0e-22 106.7 71 73.2
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 7.0e-22 106.7 63 74.6
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 9.1e-22 106.3 54 85.2
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 1.2e-21 105.9 54 87.0
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 1.2e-21 105.9 63 76.2
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 1.6e-21 105.5 55 87.3
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 1.6e-21 105.5 62 72.6
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 1.6e-21 105.5 61 77.0
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 1.6e-21 105.5 56 82.1
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.6e-21 105.5 55 87.3
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 1.6e-21 105.5 56 83.9
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 1.6e-21 105.5 63 76.2
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 2.0e-21 105.1 56 83.9
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 2.0e-21 105.1 55 81.8
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 2.0e-21 105.1 53 86.8
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 2.0e-21 105.1 53 86.8
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 2.7e-21 104.8 54 85.2
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 2.7e-21 104.8 57 77.2
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 2.7e-21 104.8 58 82.8
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 2.7e-21 104.8 55 87.3
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 3.5e-21 104.4 54 87.0
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 3.5e-21 104.4 54 85.2
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 4.5e-21 104.0 55 85.5
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 4.5e-21 104.0 58 77.6
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 5.9e-21 103.6 53 88.7
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 5.9e-21 103.6 56 82.1
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 5.9e-21 103.6 55 76.4
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 5.9e-21 103.6 57 78.9
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 5.9e-21 103.6 54 85.2
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 7.7e-21 103.2 54 83.3
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.0e-20 102.8 56 78.6
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.0e-20 102.8 56 78.6
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.0e-20 102.8 54 83.3
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 1.0e-20 102.8 57 78.9
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.3e-20 102.4 54 83.3
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 1.3e-20 102.4 52 86.5
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 1.7e-20 102.1 61 77.0
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 1.7e-20 102.1 55 83.6
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 2.3e-20 101.7 57 75.4
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 2.3e-20 101.7 56 78.6
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 2.3e-20 101.7 54 81.5
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 2.3e-20 101.7 53 84.9
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 2.9e-20 101.3 54 85.2
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 2.9e-20 101.3 54 85.2
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 2.9e-20 101.3 56 78.6
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 2.9e-20 101.3 56 82.1
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 3.8e-20 100.9 52 84.6
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 5.0e-20 100.5 54 85.2
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 5.0e-20 100.5 52 86.5
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 5.0e-20 100.5 55 83.6
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 6.6e-20 100.1 55 81.8
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 8.6e-20 99.8 56 76.8
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 8.6e-20 99.8 54 83.3
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 8.6e-20 99.8 54 83.3
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 8.6e-20 99.8 54 79.6
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 8.6e-20 99.8 57 77.2
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 1.1e-19 99.4 53 77.4
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 1.1e-19 99.4 51 84.3
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 1.1e-19 99.4 54 79.6
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 1.1e-19 99.4 53 83.0
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 1.1e-19 99.4 54 79.6
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 1.5e-19 99.0 54 79.6
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 1.5e-19 99.0 54 79.6
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 1.9e-19 98.6 55 80.0
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 2.5e-19 98.2 54 77.8
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 3.3e-19 97.8 51 84.3
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 4.2e-19 97.4 50 84.0
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 4.2e-19 97.4 50 84.0
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 4.2e-19 97.4 50 84.0
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 4.2e-19 97.4 50 84.0
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 4.2e-19 97.4 50 84.0
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 4.2e-19 97.4 52 80.8
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 4.2e-19 97.4 50 84.0
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 5.5e-19 97.1 53 83.0
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 5.5e-19 97.1 50 86.0
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.2e-18 95.9 54 77.8
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 1.6e-18 95.5 54 75.9
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 2.1e-18 95.1 50 82.0
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 2.1e-18 95.1 50 82.0
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 4.7e-18 94.0 46 87.0
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 2.3e-17 91.7 52 80.8
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 5.2e-17 90.5 54 75.9
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 5.7e-16 87.0 47 83.0
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 7.0e-14 80.1 54 66.7
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 1.5e-11 72.4 54 57.4
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 7.3e-11 70.1 36 88.9
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 1.4e-09 65.9 54 53.7
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 7.5e-08 60.1 52 51.9
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 1.3e-07 59.3 55 43.6
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 1.3e-07 59.3 55 43.6
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 2.9e-07 58.2 46 56.5
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 2.4e-06 55.1 47 51.1


User provided reference genes

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