Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.0e-145 520.0 256 100.0
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 3.3e-120 435.3 437 57.4
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 2.2e-119 432.6 437 57.2
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 7.7e-117 424.1 434 56.2
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 1.9e-115 419.5 437 54.7
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 4.4e-104 381.7 439 50.8
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 5.3e-102 374.8 437 49.7
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 5.2e-97 358.2 334 54.8
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 6.8e-97 357.8 295 60.3
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 8.0e-90 334.3 439 43.7
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 3.0e-89 332.4 435 43.0
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 4.4e-88 328.6 435 42.5
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.3e-87 327.0 426 42.5
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 1.2e-85 320.5 437 41.9
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 2.0e-85 319.7 428 42.1
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 7.8e-85 317.8 430 41.9
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 7.8e-85 317.8 430 41.9
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 1.7e-84 316.6 432 41.0
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 3.8e-84 315.5 430 41.4
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 8.6e-84 314.3 405 44.2
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 2.5e-83 312.8 425 40.9
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 2.5e-83 312.8 428 40.7
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 3.3e-83 312.4 446 41.0
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 5.6e-83 311.6 427 41.5
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 5.6e-83 311.6 434 42.4
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 1.2e-82 310.5 298 52.3
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 1.6e-82 310.1 430 41.2
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 2.1e-82 309.7 446 40.6
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 4.7e-82 308.5 432 40.0
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 4.7e-82 308.5 430 40.7
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 6.1e-82 308.1 432 39.8
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 1.0e-81 307.4 434 41.0
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 1.4e-81 307.0 434 41.2
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 1.8e-81 306.6 436 41.3
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 2.3e-81 306.2 436 41.1
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 4.0e-81 305.4 420 41.2
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 5.2e-81 305.1 434 41.0
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 6.8e-81 304.7 436 40.4
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 6.8e-81 304.7 433 40.9
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 8.9e-81 304.3 422 42.4
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 1.2e-80 303.9 422 42.2
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 1.2e-80 303.9 425 39.8
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 1.5e-80 303.5 435 40.5
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 2.6e-80 302.8 426 41.8
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 3.4e-80 302.4 429 41.0
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 4.4e-80 302.0 433 40.0
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 5.8e-80 301.6 434 39.4
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 9.8e-80 300.8 427 41.0
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 9.8e-80 300.8 430 40.5
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 9.8e-80 300.8 430 40.5
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 1.7e-79 300.1 422 41.7
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 1.7e-79 300.1 425 40.5
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 2.2e-79 299.7 423 41.4
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 2.2e-79 299.7 430 40.2
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 3.7e-79 298.9 435 40.7
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 4.9e-79 298.5 430 40.9
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 6.4e-79 298.1 445 39.3
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 8.3e-79 297.7 437 40.0
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 8.3e-79 297.7 423 41.4
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 8.3e-79 297.7 424 40.1
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 1.4e-78 297.0 435 39.5
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.4e-78 297.0 433 39.7
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 2.4e-78 296.2 429 40.6
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 3.2e-78 295.8 436 40.1
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 3.2e-78 295.8 433 39.7
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 3.2e-78 295.8 425 40.9
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 4.1e-78 295.4 433 40.9
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 4.1e-78 295.4 433 39.7
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 4.1e-78 295.4 430 40.2
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 5.4e-78 295.0 452 38.9
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 9.2e-78 294.3 422 40.8
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 1.2e-77 293.9 481 37.6
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 2.7e-77 292.7 436 39.2
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 8.6e-76 287.7 462 37.4
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 1.9e-75 286.6 434 39.4
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 3.3e-75 285.8 469 37.1
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 4.3e-75 285.4 453 38.2
Rhsim11G0028900 Rhododendron simsii HOM05D004598 ORTHO05D005550 2.1e-74 283.1 196 69.4
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 3.6e-74 282.3 440 37.7
Glyma.08G159600 Glycine max HOM05D004598 ORTHO05D005550 4.7e-74 282.0 434 38.9
QL11p052661 Quercus lobata HOM05D004598 ORTHO05D005550 6.2e-74 281.6 451 38.4
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 8.0e-74 281.2 399 40.9
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 6.4e-71 271.6 397 38.5
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 8.3e-71 271.2 490 35.3
Aqoxy3G00619 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.1e-70 270.8 435 38.2
Medtr1g058230 Medicago truncatula HOM05D004598 ORTHO05D005550 1.7e-68 263.5 422 37.9
Rhsim11G0148800 Rhododendron simsii HOM05D004598 ORTHO05D005550 3.9e-68 262.3 435 37.7
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 8.6e-68 261.2 278 48.9
CSS0012948 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 2.5e-67 259.6 159 74.8
FAN24G1674 Fragaria x ananassa HOM05D004598 ORTHO05D005550 4.3e-67 258.8 189 73.0
Nn2g12459 Nelumbo nucifera HOM05D004598 ORTHO05D005550 5.6e-67 258.5 152 78.9
EL10Ac6g13343 Beta vulgaris HOM05D004598 ORTHO05D005550 1.6e-66 256.9 378 40.5
Ciclev10001079m.g Citrus clementina HOM05D004598 ORTHO05D005550 1.1e-65 254.2 434 37.1
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 2.6e-64 249.6 221 55.2
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 1.3e-63 247.3 162 72.2
ECA240G3480 Erigeron canadensis HOM05D004598 ORTHO05D005550 1.3e-63 247.3 162 72.2
Hma1.2p1_0315F.1_g122690 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 3.7e-63 245.7 177 70.1
Sed0007699 Sechium edule HOM05D004598 ORTHO05D005550 4.9e-63 245.4 162 72.8
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 9.2e-62 241.1 407 34.4
Dinv08542 Davidia involucrata HOM05D004598 ORTHO05D005550 3.5e-61 239.2 406 37.4
arahy.Tifrunner.gnm1.ann1.B5R5MF Arachis hypogaea HOM05D004598 ORTHO05D005550 1.3e-60 237.3 162 68.5
arahy.Tifrunner.gnm1.ann1.K5F1ZR Arachis hypogaea HOM05D004598 ORTHO05D005550 1.3e-60 237.3 162 68.5
HPP92_002259 Vanilla planifolia HOM05D004598 ORTHO05D005550 1.7e-60 236.9 390 35.9
arahy.Tifrunner.gnm1.ann1.BN9D0T Arachis hypogaea HOM05D004598 ORTHO05D005550 2.3e-60 236.5 305 43.3
MD10G1130600 Malus domestica HOM05D004598 ORTHO05D005550 6.6e-60 235.0 175 70.9
Psat6g012400 Pisum sativum HOM05D004598 ORTHO05D005550 6.6e-60 235.0 213 58.2
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 1.1e-59 234.2 403 36.7
AUR62026384 Chenopodium quinoa HOM05D004598 ORTHO05D005550 1.5e-59 233.8 159 66.7
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 3.3e-59 232.6 415 36.4
BNapus_Darmor_BZH_scaffold_38p00840 Brassica napus HOM05D004598 ORTHO05D005550 4.3e-59 232.3 147 74.8
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 2.4e-57 226.5 152 69.7
Pp3c1_29840 Physcomitrium patens HOM05D004598 ORTHO05D005550 3.1e-57 226.1 396 33.6
Os03g0670200 Oryza sativa ssp. japonica HOM05D004598 ORTHO05D005550 6.8e-57 224.9 159 66.0
unitig_736.g22586 Utricularia gibba HOM05D004598 ORTHO05D005550 5.8e-56 221.9 167 62.3
arahy.Tifrunner.gnm1.ann1.PEW2A9 Arachis hypogaea HOM05D004598 ORTHO05D005550 9.9e-56 221.1 166 63.9
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 2.9e-55 219.5 379 34.8
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 6.4e-55 218.4 243 49.4
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 6.4e-55 218.4 424 33.7
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 6.4e-55 218.4 347 37.2
AagrBONN_evm.TU.Sc2ySwM_368.2499 Anthoceros agrestis HOM05D004598 ORTHO05D005550 1.3e-52 210.7 414 33.6
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 1.6e-50 203.8 378 35.7
DCAR_027631 Daucus carota HOM05D004598 ORTHO05D005550 2.6e-48 196.4 140 64.3
Dinv26897 Davidia involucrata HOM05D004598 ORTHO05D005550 1.9e-46 190.3 117 77.8
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 7.3e-43 178.3 156 51.9
Gohir.A11G320400 Gossypium hirsutum HOM05D004598 ORTHO05D005550 3.1e-41 172.9 331 35.3
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 6.9e-41 171.8 110 76.4
Cre14.g616200 Chlamydomonas reinhardtii HOM05D004598 ORTHO05D005550 3.3e-35 152.9 148 50.7
BolC9t58552H Brassica oleracea HOM05D004598 ORTHO05D005550 1.8e-33 147.1 184 48.4
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 2.4e-33 146.7 107 59.8
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 4.0e-33 146.0 319 28.8
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 9.0e-33 144.8 288 33.3
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 5.8e-32 142.1 121 54.5
vmacro20475 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 6.4e-31 138.7 92 69.6
vmacro22736 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 6.4e-31 138.7 92 69.6
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 2.5e-30 136.7 110 55.5
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 5.5e-30 135.6 104 61.5
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 9.3e-30 134.8 103 60.2
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 3.5e-29 132.9 110 51.8
MELO3C010621.2 Cucumis melo HOM05D004598 ORTHO05D005550 1.5e-27 127.5 96 65.6
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 2.1e-26 123.6 191 37.7
MCO01G023 Micromonas commoda HOM05D004598 ORTHO05D005550 6.9e-25 118.6 141 40.4
Rhsim09G0084000 Rhododendron simsii HOM05D004598 ORTHO05D005550 4.9e-23 112.5 62 80.6
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 1.2e-21 107.8 110 48.2
Cfa027243 Carpinus fangiana HOM05D004598 ORTHO05D005550 4.6e-21 105.9 132 40.9
Lj2E933T1 Lonicera japonica HOM05D004598 ORTHO05D005550 3.1e-17 93.2 70 58.6
SHI39037 Sapria himalayana HOM05D004598 ORTHO05D005550 3.4e-16 89.7 174 36.8
PRCOL_00005536 Prasinoderma coloniale HOM05D004598 ORTHO05D005550 1.1e-14 84.7 137 35.0
Medtr6g051670 Medicago truncatula HOM05D004598 ORTHO05D005550 6.3e-10 68.9 43 67.4
SHI39035 Sapria himalayana HOM05D004598 ORTHO05D005550 6.3e-10 68.9 45 73.3
SHI47796 Sapria himalayana HOM05D004598 ORTHO05D005550 9.1e-09 65.1 53 58.5
Zm00001eb096280 Zea mays HOM05D004598 ORTHO05D005550 9.1e-09 65.1 46 65.2
SHI53927 Sapria himalayana HOM05D004598 ORTHO05D005550 7.7e-08 62.0 52 48.1
SHI53813 Sapria himalayana HOM05D004598 ORTHO05D005550 1.3e-07 61.2 52 48.1


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