Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.1e-213 745.3 362 100.0
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.3e-210 736.1 362 98.3
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.2e-210 735.3 362 97.8
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.0e-208 727.2 362 97.2
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 8.4e-186 653.7 362 85.6
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 1.7e-162 576.2 337 80.4
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 2.0e-158 562.8 333 79.6
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 3.7e-157 558.5 338 78.4
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 4.8e-157 558.1 335 77.6
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 4.1e-156 555.1 335 77.0
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 5.3e-156 554.7 335 78.5
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 2.2e-154 549.3 335 76.1
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 2.2e-154 549.3 335 76.4
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 6.7e-151 537.7 335 75.5
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 2.0e-150 536.2 334 76.3
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.3e-149 533.5 326 77.0
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.2e-149 532.7 335 76.4
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.8e-148 529.6 328 75.0
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 1.8e-148 529.6 334 76.0
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 2.0e-147 526.2 333 74.5
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 1.0e-146 523.9 332 75.0
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.3e-146 523.5 354 71.8
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 3.8e-146 521.9 335 72.8
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 3.2e-145 518.8 361 69.0
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.7e-144 515.0 331 74.0
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 4.7e-144 515.0 335 73.4
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 8.0e-144 514.2 340 70.6
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.4e-143 513.5 334 71.9
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.8e-143 513.1 331 73.7
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 3.0e-143 512.3 335 71.0
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 5.2e-143 511.5 328 73.2
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 6.8e-143 511.1 323 74.0
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 2.0e-142 509.6 324 74.4
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 5.7e-142 508.1 325 73.2
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.3e-141 506.9 329 71.1
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.3e-141 506.9 337 70.0
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 3.7e-141 505.4 334 70.7
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 4.8e-141 505.0 324 73.5
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.1e-140 503.8 321 73.2
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 5.4e-140 501.5 335 71.6
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 7.0e-140 501.1 335 71.0
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 7.0e-140 501.1 335 70.4
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 1.2e-139 500.4 334 72.2
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.6e-139 500.0 336 71.1
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 3.5e-139 498.8 323 72.4
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 4.5e-139 498.4 336 69.3
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 7.7e-139 497.7 336 72.6
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 7.7e-139 497.7 324 72.5
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.0e-138 497.3 339 69.6
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.7e-138 496.5 332 71.7
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 5.0e-138 495.0 333 70.9
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 6.5e-138 494.6 334 70.4
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.9e-137 493.0 334 70.4
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 9.5e-137 490.7 309 74.4
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 2.1e-136 489.6 334 71.0
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 6.1e-136 488.0 325 71.7
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 6.1e-136 488.0 363 66.1
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 8.0e-136 487.6 333 70.9
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.8e-135 486.5 325 71.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 8.8e-135 484.2 360 66.1
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 1.2e-134 483.8 322 71.1
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 1.2e-134 483.8 322 71.1
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 1.2e-134 483.8 322 71.1
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 5.7e-134 481.5 331 68.3
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 7.5e-134 481.1 337 68.0
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 7.5e-134 481.1 322 71.1
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 2.2e-133 479.6 352 64.2
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.2e-133 479.6 331 69.2
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 3.7e-133 478.8 342 67.5
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 6.3e-133 478.0 322 70.8
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 6.3e-133 478.0 322 70.8
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.3e-133 478.0 336 69.0
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 8.3e-133 477.6 326 69.9
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 8.3e-133 477.6 327 70.0
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.4e-132 476.9 323 70.0
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.4e-132 476.9 330 69.1
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 2.7e-131 472.6 331 67.7
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 3.5e-131 472.2 331 67.4
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.3e-130 470.3 335 68.1
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 4.3e-129 465.3 316 69.9
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 4.3e-129 465.3 331 68.6
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.6e-128 462.2 332 67.2
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 7.5e-126 454.5 334 68.6
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.3e-125 453.8 309 69.9
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.2e-123 447.2 320 66.9
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 5.0e-122 441.8 339 62.8
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 5.6e-121 438.3 317 66.6
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 3.0e-114 416.0 336 62.2
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.6e-114 414.5 336 61.6
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.5e-105 386.3 310 61.6
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 5.8e-102 375.2 313 57.8
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.7e-101 373.6 296 63.2
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 4.1e-100 369.0 318 58.5
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.4e-94 349.0 207 79.7
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 3.1e-87 326.2 308 53.6
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 9.9e-86 321.2 310 53.2
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.2e-83 314.3 235 65.1
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.5e-83 312.8 203 72.4
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.8e-82 310.5 308 50.6
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 3.7e-80 302.8 215 68.4
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.3e-74 284.3 134 100.0
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.1e-74 282.3 161 82.6
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.4e-68 264.2 205 63.4
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 1.0e-66 258.1 177 68.4
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 6.7e-66 255.4 164 73.2
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 4.1e-63 246.1 256 52.7
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.9e-57 227.3 158 70.9
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.6e-54 216.9 285 43.9
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.0e-46 190.7 127 68.5
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 3.4e-46 189.9 90 95.6
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.0e-45 188.3 130 70.8
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.1e-43 179.1 147 59.9
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 8.5e-29 132.1 136 49.3
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.5e-25 119.0 135 45.2
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.8e-18 97.8 72 65.3
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 3.4e-17 93.6 283 29.3
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 3.3e-12 77.0 70 57.1
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 9.5e-12 75.5 119 37.8
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 5.4e-07 59.7 213 29.6
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.2e-06 58.5 149 30.2


User provided reference genes

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