Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G1631 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.6e-94 348.2 174 100.0
FAN25G0074 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.8e-46 189.1 228 50.4
FAN11G3668 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-43 180.3 228 49.6
FAN18G3922 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.9e-42 176.4 226 49.1
FAN12G0049 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.2e-42 174.5 231 48.9
FAN22G1509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.2e-42 174.5 233 47.6
FAN09G1485 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-40 168.3 127 66.9
FAN23G1644 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-39 166.8 117 70.1
FAN28G0569 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-39 166.4 126 65.9
FAN15G1902 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.7e-39 164.1 127 65.4
FAN26G0220 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.7e-39 164.1 117 69.2
FAN06G5011 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-38 163.7 93 82.8
FAN02G1343 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-38 163.3 93 82.8
FAN28G0938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.7e-38 162.2 93 81.7
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.2e-38 161.0 117 67.5
FAN05G4362 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-37 160.6 93 80.6
FAN15G1992 Fragaria x ananassa HOM05D000261 ORTHO05D001168 1.4e-37 160.2 173 55.5
FvH4_5g23942 Fragaria vesca HOM05D002480 ORTHO05D003145 1.8e-37 159.8 182 53.3
FAN18G1209 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-37 159.8 231 45.5
FAN25G1938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.1e-37 159.1 126 64.3
FAN03G2236 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.1e-37 157.5 117 67.5
FAN15G0584 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.6e-36 156.8 171 55.0
FAN03G1539 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.4e-31 139.0 127 59.1
FAN05G3149 Fragaria x ananassa HOM05D002959 ORTHO05D003237 3.7e-30 135.6 93 68.8
FvH4_5g24922 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-29 133.7 211 42.7
FAN16G1534 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.1e-29 132.1 113 59.3
FAN14G5134 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.7e-28 127.9 175 44.6
FAN26G2394 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.0e-27 125.2 110 51.8
FAN06G4257 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.6e-27 124.4 188 43.6
FvH4_4g26661 Fragaria vesca HOM05D002480 ORTHO05D003145 1.5e-26 123.6 117 59.0
FAN21G2545 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.2e-26 121.3 197 39.6
FAN12G2038 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-25 119.8 103 62.1
FAN19G0554 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-24 116.7 92 57.6
FAN13G3053 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-24 116.3 79 68.4
FAN10G3390 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-24 115.2 209 36.4
FAN09G0095 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.9e-24 114.4 123 49.6
FAN13G0545 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.7e-20 102.8 121 48.8
FAN06G1359 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.5e-20 102.4 68 70.6
FAN28G0509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.5e-20 102.4 79 58.2
FvH4_1g20081 Fragaria vesca HOM05D002480 ORTHO05D003145 5.9e-20 101.7 92 56.5
FvH4_4g05731 Fragaria vesca HOM05D002480 ORTHO05D003145 7.8e-20 101.3 123 42.3
FAN10G2984 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-19 99.8 69 66.7
FAN10G2799 Fragaria x ananassa HOM05D000125 ORTHO05D000120 1.2e-17 94.0 105 40.0
FvH4_4g13551 Fragaria vesca HOM05D002480 ORTHO05D003145 4.7e-17 92.0 95 41.1
FvH4_2g24951 Fragaria vesca HOM05D002480 ORTHO05D003145 2.3e-16 89.7 95 45.3
FvH4_5g05871 Fragaria vesca HOM05D002480 ORTHO05D003145 3.0e-16 89.4 110 38.2
FvH4_1g22022 Fragaria vesca HOM05D002480 ORTHO05D003145 4.0e-16 89.0 138 37.0
FAN02G1315 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.0e-16 89.0 86 47.7
FAN02G4154 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.0e-16 89.0 86 47.7
FAN18G2748 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.0e-16 89.0 54 74.1
FvH4_4g06577 Fragaria vesca HOM05D002480 ORTHO05D003145 6.8e-16 88.2 66 62.1
FAN05G4151 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.8e-16 88.2 95 45.3
FAN08G0214 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.8e-16 88.2 120 43.3
FAN05G3338 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-15 87.4 85 47.1
FAN16G2492 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-15 87.0 76 59.2
FAN06G4463 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.4e-15 85.5 91 45.1
FvH4_5g12461 Fragaria vesca HOM05D002480 ORTHO05D003145 9.8e-15 84.3 86 48.8
FAN12G1965 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-14 84.0 111 40.5
FAN14G0918 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-14 83.6 59 64.4
FAN14G2911 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-14 83.6 59 64.4
FAN18G3832 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.9e-14 82.0 86 47.7
FvH4_1g27932 Fragaria vesca HOM05D002480 ORTHO05D003145 6.4e-14 81.6 71 54.9
FAN06G1988 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.4e-14 81.6 81 56.8
FAN17G1610 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.4e-14 81.6 53 69.8
FAN05G5003 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-13 80.9 80 46.2
FvH4_2g07601 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-13 80.5 187 31.0
FAN16G3475 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-13 80.5 68 52.9
FvH4_7g18780 Fragaria vesca HOM05D002480 ORTHO05D003145 2.4e-13 79.7 90 44.4
FAN15G1816 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.2e-13 79.3 86 45.3
FAN05G3618 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.1e-13 79.0 67 46.3
FAN14G0992 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.4e-13 78.6 90 45.6
FAN26G3107 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.4e-13 78.6 135 42.2
FAN02G0444 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.2e-13 77.8 175 31.4
FAN14G0874 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.2e-13 77.8 80 46.2
FAN18G1129 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.2e-13 77.8 99 38.4
FvH4_7g00030 Fragaria vesca HOM05D002480 ORTHO05D003145 1.2e-12 77.4 79 53.2
FAN21G3182 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-12 76.6 82 46.3
FAN21G1872 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.7e-12 76.3 68 50.0
FAN15G2272 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.6e-12 75.5 170 31.2
FvH4_4g05732 Fragaria vesca HOM05D002480 ORTHO05D003145 1.0e-11 74.3 72 44.4
FAN04G3005 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-11 74.3 103 39.8
FAN09G2457 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-11 73.6 88 43.2
FvH4_3g34441 Fragaria vesca HOM05D002480 ORTHO05D003145 2.3e-11 73.2 225 26.7
FAN10G3968 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-11 73.2 88 42.0
FAN16G1666 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-11 73.2 83 44.6
FAN06G2080 Fragaria x ananassa HOM05D000125 ORTHO05D000120 3.9e-11 72.4 66 48.5
FAN18G1519 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.9e-11 72.4 72 45.8
FvH4_7g08120 Fragaria vesca HOM05D002480 ORTHO05D003145 5.0e-11 72.0 71 43.7
FAN06G0850 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.0e-11 72.0 71 43.7
FvH4_4g12651 Fragaria vesca HOM05D008430 ORTHO05D010682 2.5e-10 69.7 87 35.6
FAN05G3376 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.5e-10 69.7 52 53.8
FAN17G1313 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.5e-10 69.7 81 43.2
FAN24G3444 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.3e-10 69.3 75 45.3
FvH4_7g16371 Fragaria vesca HOM05D008430 ORTHO05D010682 5.6e-10 68.6 75 40.0
FAN22G0805 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.6e-10 68.6 150 33.3
FAN15G0005 Fragaria x ananassa HOM05D008430 ORTHO05D010682 7.3e-10 68.2 87 36.8
FAN13G1471 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.5e-10 67.8 95 40.0
FvH4_4g07081 Fragaria vesca HOM05D008119 ORTHO05D010214 1.6e-09 67.0 85 35.3
FAN18G3828 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.6e-09 67.0 70 48.6
FvH4_6g03011 Fragaria vesca HOM05D008430 ORTHO05D010682 2.1e-09 66.6 87 36.8
FAN08G1660 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-09 66.6 50 56.0
FAN10G1838 Fragaria x ananassa HOM05D008119 ORTHO05D010214 2.8e-09 66.2 84 34.5
FAN12G2566 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.8e-09 66.2 90 41.1
FAN06G0233 Fragaria x ananassa HOM05D008430 ORTHO05D010682 3.6e-09 65.9 75 40.0
FAN06G0355 Fragaria x ananassa HOM05D008430 ORTHO05D010682 8.0e-09 64.7 75 40.0
FAN09G3469 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.0e-09 64.7 73 42.5
FAN25G0652 Fragaria x ananassa HOM05D008430 ORTHO05D010682 8.0e-09 64.7 61 42.6
FAN05G0275 Fragaria x ananassa HOM05D000514 ORTHO05D000222 1.1e-08 64.3 81 34.6
FAN06G1617 Fragaria x ananassa HOM05D008119 ORTHO05D010214 1.1e-08 64.3 89 34.8
FAN21G1308 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.1e-08 64.3 70 38.6
RcHm_v2.0_Chr5g0032121 Rosa chinensis HOM05D008430 ORTHO05D011995 1.1e-08 64.3 87 29.9
FAN11G1368 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.1e-08 62.8 80 38.8
FAN07G0316 Fragaria x ananassa HOM05D008119 ORTHO05D010214 4.0e-08 62.4 96 36.5
FAN12G4356 Fragaria x ananassa HOM05D008119 ORTHO05D010214 4.0e-08 62.4 84 33.3
FvH4_4g01621 Fragaria vesca HOM05D008119 ORTHO05D010214 5.2e-08 62.0 73 37.0
FAN07G1539 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-08 62.0 70 51.4
FAN17G0913 Fragaria x ananassa HOM05D003375 ORTHO05D004719 5.2e-08 62.0 107 29.9
FAN21G4045 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-08 62.0 96 35.4
FAN26G1926 Fragaria x ananassa HOM05D003375 ORTHO05D004719 6.8e-08 61.6 128 25.8
FvH4_7g00272 Fragaria vesca HOM05D008119 ORTHO05D010214 8.9e-08 61.2 89 33.7
FAN08G2692 Fragaria x ananassa HOM05D008119 ORTHO05D010214 8.9e-08 61.2 92 32.6
RcHm_v2.0_Chr6g0265791 Rosa chinensis HOM05D003375 ORTHO05D004719 8.9e-08 61.2 93 28.0
FAN11G3034 Fragaria x ananassa HOM05D008119 ORTHO05D010214 1.5e-07 60.5 85 34.1
FAN03G0441 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-07 60.1 66 40.9
FAN03G1973 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-07 60.1 58 53.4
FvH4_5g30830 Fragaria vesca HOM05D002480 ORTHO05D003145 3.4e-07 59.3 55 49.1
FAN07G0392 Fragaria x ananassa HOM05D008119 ORTHO05D010214 3.4e-07 59.3 79 34.2
FAN13G2412 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.4e-07 58.9 54 48.1
FvH4_6g05152 Fragaria vesca HOM05D007432 ORTHO05D005238 5.8e-07 58.5 79 34.2
FAN04G1189 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.8e-07 58.5 94 36.2
FAN08G2294 Fragaria x ananassa HOM05D008119 ORTHO05D010214 5.8e-07 58.5 89 34.8
FAN14G0817 Fragaria x ananassa HOM05D007432 ORTHO05D005238 5.8e-07 58.5 79 34.2
RcHm_v2.0_Chr1g0344871 Rosa chinensis HOM05D003375 ORTHO05D004719 5.8e-07 58.5 90 27.8
FAN12G0307 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.5e-07 58.2 68 50.0
FAN25G0390 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.5e-07 58.2 80 31.2
FvH4_6g26861 Fragaria vesca HOM05D008119 ORTHO05D010214 9.8e-07 57.8 73 32.9
FAN08G2941 Fragaria x ananassa HOM05D003375 ORTHO05D004719 9.8e-07 57.8 93 25.8
FAN10G0217 Fragaria x ananassa HOM05D003375 ORTHO05D004719 9.8e-07 57.8 88 30.7
FAN12G1540 Fragaria x ananassa HOM05D003375 ORTHO05D004719 9.8e-07 57.8 94 28.7
FAN02G3411 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-06 57.4 63 42.9
FvH4_1g20041 Fragaria vesca HOM05D008119 ORTHO05D010214 1.7e-06 57.0 89 31.5
FvH4_2g08490 Fragaria vesca HOM05D000542 ORTHO05D000202 1.7e-06 57.0 41 53.7
FAN14G4246 Fragaria x ananassa HOM05D056573 ORTHO05D045796 1.7e-06 57.0 61 32.8
FAN20G0719 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.9e-06 56.2 110 34.5
FAN22G0625 Fragaria x ananassa HOM05D017501 ORTHO05D020690 2.9e-06 56.2 94 25.5
FAN09G1541 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.7e-06 55.8 79 45.6
FAN13G0804 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.7e-06 55.8 61 52.5
FvH4_3g22272 Fragaria vesca HOM05D032009 ORTHO05D010214 4.9e-06 55.5 77 33.8
FvH4_6g16701 Fragaria vesca HOM05D002480 ORTHO05D003145 4.9e-06 55.5 121 34.7
FvH4_2g14911 Fragaria vesca HOM05D003375 ORTHO05D004719 6.4e-06 55.1 75 30.7
FvH4_6g28051 Fragaria vesca HOM05D003375 ORTHO05D004719 6.4e-06 55.1 64 34.4
FvH4_7g01201 Fragaria vesca HOM05D002480 ORTHO05D003145 6.4e-06 55.1 63 47.6
FAN17G1503 Fragaria x ananassa HOM05D008119 ORTHO05D010214 6.4e-06 55.1 92 33.7
FAN23G0604 Fragaria x ananassa HOM05D008119 ORTHO05D010214 6.4e-06 55.1 85 34.1
Thecc.01G173700 Theobroma cacao HOM05D000003 ORTHO05D000126 6.4e-06 55.1 99 29.3
FAN14G5553 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.3e-06 54.7 54 48.1
FAN16G0145 Fragaria x ananassa HOM05D003375 ORTHO05D004719 8.3e-06 54.7 57 36.8


User provided reference genes

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