Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G1268 Fragaria x ananassa HOM05D007940 ORTHO05D010046 5.2e-53 210.7 100 100.0
FAN03G3294 Fragaria x ananassa HOM05D004346 ORTHO05D005153 4.2e-18 94.7 51 90.2
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 6.0e-17 90.9 51 88.2
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 8.7e-16 87.0 51 82.4
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 8.7e-16 87.0 51 82.4
FAN24G2461 Fragaria x ananassa HOM05D000188 ORTHO05D000362 2.5e-15 85.5 51 82.4
FAN12G0891 Fragaria x ananassa HOM05D007940 ORTHO05D010046 4.3e-15 84.7 53 79.2
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 4.3e-15 84.7 53 79.2
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 2.5e-07 58.9 37 70.3
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 3.3e-07 58.5 37 70.3
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 5.7e-07 57.8 35 74.3
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 7.4e-07 57.4 35 71.4
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 9.6e-07 57.0 35 68.6
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 2.1e-06 55.8 35 65.7
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 2.1e-06 55.8 35 65.7
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 2.1e-06 55.8 35 65.7
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 2.1e-06 55.8 35 68.6
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 2.1e-06 55.8 35 71.4
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 2.8e-06 55.5 51 49.0
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 2.8e-06 55.5 35 68.6
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 3.7e-06 55.1 35 65.7
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 4.8e-06 54.7 35 65.7
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 4.8e-06 54.7 35 65.7
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 4.8e-06 54.7 35 65.7
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 4.8e-06 54.7 35 68.6
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 4.8e-06 54.7 47 53.2
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 6.2e-06 54.3 37 59.5
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 6.2e-06 54.3 39 64.1
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 8.2e-06 53.9 39 64.1
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 8.2e-06 53.9 35 65.7
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 8.2e-06 53.9 35 65.7


User provided reference genes

Program Settings