Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 6.2e-38 160.2 77 100.0
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.3e-30 136.0 70 92.9
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 1.5e-28 129.0 67 91.0
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 2.8e-22 108.2 58 91.4
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.8e-22 108.2 58 91.4
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.8e-22 108.2 58 91.4
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 4.8e-22 107.5 58 87.9
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 3.1e-21 104.8 58 87.9
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 4.1e-21 104.4 59 84.7
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 4.1e-21 104.4 59 83.1
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 6.9e-21 103.6 58 84.5
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 6.9e-21 103.6 58 84.5
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 9.0e-21 103.2 58 84.5
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 1.2e-20 102.8 58 84.5
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 1.5e-20 102.4 58 82.8
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 1.5e-20 102.4 58 84.5
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 1.5e-20 102.4 58 84.5
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 2.0e-20 102.1 58 82.8
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 3.4e-20 101.3 58 82.8
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 4.5e-20 100.9 58 82.8
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 4.5e-20 100.9 58 82.8
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 4.5e-20 100.9 58 82.8
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 4.5e-20 100.9 58 82.8
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 4.5e-20 100.9 58 81.0
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 4.5e-20 100.9 58 81.0
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 5.9e-20 100.5 58 81.0
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 5.9e-20 100.5 58 82.8
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 5.9e-20 100.5 58 82.8
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 5.9e-20 100.5 58 81.0
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 5.9e-20 100.5 58 79.3
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 7.6e-20 100.1 58 81.0
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 7.6e-20 100.1 58 81.0
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 1.0e-19 99.8 58 79.3
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 1.0e-19 99.8 58 79.3
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 1.0e-19 99.8 58 79.3
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 1.0e-19 99.8 58 79.3
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 1.0e-19 99.8 58 79.3
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 1.0e-19 99.8 58 81.0
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 1.3e-19 99.4 58 79.3
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 1.7e-19 99.0 58 79.3
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 1.7e-19 99.0 58 82.8
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 1.7e-19 99.0 58 79.3
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 2.2e-19 98.6 58 81.0
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 2.2e-19 98.6 59 76.3
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 2.2e-19 98.6 58 82.8
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 2.2e-19 98.6 58 75.9
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 2.2e-19 98.6 58 79.3
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 2.2e-19 98.6 58 82.8
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 2.2e-19 98.6 58 82.8
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 2.2e-19 98.6 58 75.9
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 2.9e-19 98.2 58 77.6
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 2.9e-19 98.2 58 77.6
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 2.9e-19 98.2 58 77.6
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 2.9e-19 98.2 58 81.0
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 3.8e-19 97.8 58 75.9
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 3.8e-19 97.8 58 79.3
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 3.8e-19 97.8 58 77.6
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 3.8e-19 97.8 58 77.6
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 3.8e-19 97.8 58 75.9
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 5.0e-19 97.4 56 82.1
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 5.0e-19 97.4 59 74.6
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 6.5e-19 97.1 58 77.6
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 6.5e-19 97.1 59 76.3
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 6.5e-19 97.1 58 77.6
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 6.5e-19 97.1 58 75.9
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 6.5e-19 97.1 58 77.6
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 6.5e-19 97.1 58 75.9
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 6.5e-19 97.1 58 77.6
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 8.5e-19 96.7 58 75.9
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 8.5e-19 96.7 58 75.9
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 8.5e-19 96.7 58 75.9
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 8.5e-19 96.7 58 74.1
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 8.5e-19 96.7 63 77.8
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 1.1e-18 96.3 58 77.6
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 1.1e-18 96.3 58 77.6
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 1.4e-18 95.9 58 77.6
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 1.9e-18 95.5 58 77.6
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 2.5e-18 95.1 58 79.3
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 2.5e-18 95.1 58 75.9
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 2.5e-18 95.1 58 75.9
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 2.5e-18 95.1 58 75.9
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 2.5e-18 95.1 58 75.9
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 3.2e-18 94.7 58 74.1
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 3.2e-18 94.7 58 75.9
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 5.5e-18 94.0 58 74.1
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 5.5e-18 94.0 58 74.1
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 5.5e-18 94.0 58 70.7
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 7.2e-18 93.6 58 77.6
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 7.2e-18 93.6 58 74.1
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 7.2e-18 93.6 58 75.9
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 9.3e-18 93.2 58 75.9
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 9.3e-18 93.2 58 75.9
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 9.3e-18 93.2 58 72.4
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 1.6e-17 92.4 58 72.4
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.6e-17 92.4 58 72.4
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 1.6e-17 92.4 58 72.4
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 2.1e-17 92.0 58 75.9
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 2.7e-17 91.7 58 72.4
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 6.1e-17 90.5 51 84.3
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 3.9e-16 87.8 58 67.2
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 3.9e-16 87.8 58 67.2
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 1.8e-13 79.0 57 61.4
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 3.1e-13 78.2 58 65.5
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 5.3e-13 77.4 58 69.0
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 7.7e-12 73.6 44 75.0
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 1.0e-11 73.2 57 59.6
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 1.0e-11 73.2 56 57.1
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 2.2e-11 72.0 58 56.9
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 2.2e-11 72.0 58 60.3
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 2.2e-11 72.0 58 58.6
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 2.9e-11 71.6 57 59.6
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 3.8e-11 71.2 58 56.9
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 5.0e-11 70.9 57 61.4
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 8.5e-11 70.1 58 62.1
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 1.4e-10 69.3 58 62.1
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 9.4e-10 66.6 55 60.0
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 3.6e-09 64.7 55 56.4
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 7.9e-09 63.5 58 60.3
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 1.0e-08 63.2 149 33.6
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 3.9e-08 61.2 88 38.6
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 3.9e-08 61.2 57 54.4
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 1.1e-07 59.7 47 66.0
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 2.2e-06 55.5 46 52.2


User provided reference genes

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