Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.2e-186 656.4 334 100.0
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 4.5e-133 478.4 335 80.0
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 6.5e-132 474.6 335 78.8
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 3.0e-129 465.7 335 77.6
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.2e-127 459.5 331 77.3
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 3.2e-107 392.5 349 65.3
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 4.0e-105 385.6 352 61.9
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 1.7e-103 380.2 344 63.4
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 3.7e-103 379.0 332 63.6
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 1.1e-102 377.5 333 63.7
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 1.4e-102 377.1 354 58.2
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 9.1e-102 374.4 333 63.7
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 5.9e-101 371.7 335 63.0
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 7.7e-101 371.3 353 57.2
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 1.0e-100 370.9 338 63.9
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 5.0e-100 368.6 342 59.4
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 1.1e-99 367.5 335 61.8
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 1.9e-99 366.7 340 60.9
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 2.5e-99 366.3 334 61.7
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 5.5e-99 365.2 338 59.2
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 9.4e-99 364.4 337 59.9
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 1.2e-98 364.0 331 63.1
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 4.7e-98 362.1 343 59.2
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 6.1e-98 361.7 343 60.9
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 1.8e-97 360.1 353 59.2
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 2.3e-97 359.8 337 59.6
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 4.0e-97 359.0 344 59.9
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 6.8e-97 358.2 338 60.1
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 8.8e-97 357.8 343 59.5
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 1.5e-96 357.1 341 58.4
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 2.0e-96 356.7 353 58.4
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 2.6e-96 356.3 333 61.3
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 2.6e-96 356.3 334 59.0
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 9.8e-96 354.4 337 58.8
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 4.8e-95 352.1 338 59.2
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 6.3e-95 351.7 343 56.6
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 2.7e-93 346.3 339 59.0
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 5.9e-93 345.1 338 58.3
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 5.9e-93 345.1 343 56.3
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 1.0e-92 344.4 331 58.0
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 1.7e-92 343.6 339 58.7
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 2.2e-92 343.2 335 59.4
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 2.9e-92 342.8 338 57.7
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 3.8e-92 342.4 340 57.1
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 5.0e-92 342.0 345 56.8
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 5.0e-92 342.0 336 57.4
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 8.5e-92 341.3 340 56.2
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 1.1e-91 340.9 337 58.8
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 1.1e-91 340.9 337 59.9
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 2.5e-91 339.7 346 54.3
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 2.5e-91 339.7 342 56.7
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 4.2e-91 339.0 334 57.5
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 4.2e-91 339.0 344 55.8
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 4.2e-91 339.0 336 57.4
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 5.5e-91 338.6 334 58.1
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 7.2e-91 338.2 342 57.3
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 9.4e-91 337.8 330 57.9
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 9.4e-91 337.8 332 59.0
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 1.2e-90 337.4 359 55.4
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 1.2e-90 337.4 352 55.4
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 1.2e-90 337.4 331 56.8
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 1.6e-90 337.0 331 57.4
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 2.1e-90 336.7 336 56.5
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 4.7e-90 335.5 327 60.2
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 1.4e-89 334.0 332 56.9
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 1.4e-89 334.0 340 56.8
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.3e-89 333.2 327 59.6
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 2.3e-89 333.2 338 55.6
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 5.2e-89 332.0 341 55.4
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 2.0e-88 330.1 343 55.4
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 2.0e-88 330.1 339 55.2
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 3.4e-88 329.3 343 55.4
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 4.4e-88 328.9 335 57.0
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 5.7e-88 328.6 340 55.3
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 1.7e-87 327.0 335 55.2
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 4.9e-87 325.5 343 53.1
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 8.3e-87 324.7 345 54.2
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 2.4e-86 323.2 340 55.0
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 1.6e-85 320.5 346 54.0
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 1.6e-85 320.5 300 60.3
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 4.5e-85 318.9 338 55.0
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 1.7e-84 317.0 339 54.3
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 2.3e-84 316.6 365 51.8
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 1.1e-83 314.3 332 52.7
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 2.1e-82 310.1 332 53.3
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 6.1e-82 308.5 328 55.2
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 9.8e-80 301.2 315 54.0
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 9.8e-80 301.2 335 50.7
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 3.7e-79 299.3 226 69.9
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 2.4e-78 296.6 325 50.5
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 4.1e-78 295.8 219 70.3
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 2.3e-76 290.0 350 50.6
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 2.3e-76 290.0 350 50.6
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 7.3e-75 285.0 220 67.3
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 6.2e-74 282.0 270 56.7
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 6.2e-74 282.0 226 66.8
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 6.2e-74 282.0 209 69.9
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 1.5e-72 277.3 331 49.2
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 2.0e-72 276.9 330 48.8
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 1.0e-68 264.6 338 46.7
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 1.2e-66 257.7 335 49.3
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 2.2e-63 246.9 331 47.7
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 2.7e-61 240.0 281 50.9
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 1.9e-59 233.8 225 59.6
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 3.4e-56 223.0 240 55.4
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 1.1e-49 201.4 326 41.4
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 4.9e-47 192.6 103 98.1
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 6.2e-42 175.6 319 38.2
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 6.4e-39 165.6 103 84.5
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 3.9e-36 156.4 104 79.8
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 4.0e-33 146.4 179 46.4
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 1.0e-28 131.7 313 31.9
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.8e-17 94.4 58 75.9
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.8e-17 94.4 58 75.9
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 5.3e-17 92.8 49 98.0
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 7.4e-11 72.4 48 64.6


User provided reference genes

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