Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G0460 Fragaria x ananassa HOM05D005237 ORTHO05D006189 2.8e-110 402.1 232 100.0
FAN02G0796 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.5e-50 203.8 132 82.6
FAN28G2985 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.3e-41 174.1 98 88.8
FAN20G1904 Fragaria x ananassa HOM05D005237 ORTHO05D006189 6.2e-41 171.8 167 61.7
FAN21G3302 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.4e-40 170.6 90 93.3
FvH4_3g33280 Fragaria vesca HOM05D005237 ORTHO05D006189 7.6e-39 164.9 97 84.5
FAN11G2421 Fragaria x ananassa HOM05D005237 ORTHO05D006189 7.6e-39 164.9 97 84.5
FAN21G0596 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.7e-38 163.7 97 84.5
FAN16G0279 Fragaria x ananassa HOM05D005237 ORTHO05D006189 3.8e-38 162.5 92 87.0
MD15G1163100 Malus domestica HOM05D005237 ORTHO05D006189 8.4e-38 161.4 97 82.5
Prupe.7G251500 Prunus persica HOM05D005237 ORTHO05D006189 1.9e-37 160.2 97 81.4
FAN17G0595 Fragaria x ananassa HOM05D005237 ORTHO05D006189 2.4e-37 159.8 96 84.4
FAN25G0883 Fragaria x ananassa HOM05D005237 ORTHO05D006189 3.2e-37 159.5 89 88.8
CiPaw.03G250600 Carya illinoinensis HOM05D005237 ORTHO05D006189 4.2e-37 159.1 98 80.6
MD02G1020300 Malus domestica HOM05D005237 ORTHO05D006189 4.2e-37 159.1 97 80.4
RcHm_v2.0_Chr5g0060671 Rosa chinensis HOM05D005237 ORTHO05D006189 1.6e-36 157.1 93 82.8
QL02p090325 Quercus lobata HOM05D005237 ORTHO05D006189 2.1e-36 156.8 98 79.6
FAN17G0540 Fragaria x ananassa HOM05D005237 ORTHO05D006189 2.7e-36 156.4 89 87.6
Glyma.13G162500 Glycine max HOM05D005237 ORTHO05D006189 4.6e-36 155.6 95 82.1
Glyma.17G108800 Glycine max HOM05D005237 ORTHO05D006189 4.6e-36 155.6 95 82.1
Ca_21648_v3 Cicer arietinum L. HOM05D005237 ORTHO05D006189 6.0e-36 155.2 95 82.1
TWI32G1192 Tripterygium wilfordii HOM05D005237 ORTHO05D006189 7.9e-36 154.8 95 80.0
Ciclev10009685m.g Citrus clementina HOM05D005237 ORTHO05D006189 1.3e-35 154.1 96 81.2
Eucgr.C04376 Eucalyptus grandis HOM05D005237 ORTHO05D006189 1.3e-35 154.1 96 79.2
Lj7A437T44 Lonicera japonica HOM05D005237 ORTHO05D006189 1.3e-35 154.1 97 80.4
Haze_25466 Corylus avellana HOM05D005237 ORTHO05D006189 3.0e-35 152.9 98 78.6
Haze_25470 Corylus avellana HOM05D005237 ORTHO05D006189 3.0e-35 152.9 98 78.6
Actinidia07336 Actinidia chinensis HOM05D005237 ORTHO05D006189 3.9e-35 152.5 95 81.1
Medtr4g115900 Medicago truncatula HOM05D005237 ORTHO05D006189 3.9e-35 152.5 95 80.0
TWI38G2392 Tripterygium wilfordii HOM05D005237 ORTHO05D006189 3.9e-35 152.5 90 84.4
MD10G1159100 Malus domestica HOM05D005237 ORTHO05D006189 5.1e-35 152.1 99 77.8
vmacro07739 Vaccinium macrocarpon HOM05D005237 ORTHO05D006189 5.1e-35 152.1 95 80.0
arahy.Tifrunner.gnm1.ann1.E2H6AC Arachis hypogaea HOM05D005237 ORTHO05D006189 6.7e-35 151.8 95 80.0
COL.COLO4_15552 Corchorus olitorius HOM05D005237 ORTHO05D006189 1.1e-34 151.0 93 81.7
Gohir.D08G100500 Gossypium hirsutum HOM05D005237 ORTHO05D006189 1.1e-34 151.0 93 79.6
Lj4g0017742 Lotus japonicus HOM05D005237 ORTHO05D006189 1.1e-34 151.0 95 81.1
Dinv41456 Davidia involucrata HOM05D005237 ORTHO05D006189 1.5e-34 150.6 95 78.9
Duzib150G0783 Durio zibethinus HOM05D005237 ORTHO05D006189 1.5e-34 150.6 97 77.3
Manes.14G117900 Manihot esculenta HOM05D005237 ORTHO05D006189 1.5e-34 150.6 95 78.9
TPR.G39824 Trifolium pratense HOM05D005237 ORTHO05D006189 1.5e-34 150.6 93 80.6
Cpa.g.sc277.15 Carica papaya HOM05D005237 ORTHO05D006189 1.9e-34 150.2 96 78.1
Dinv36460 Davidia involucrata HOM05D005237 ORTHO05D006189 1.9e-34 150.2 93 81.7
Lalb_Chr12g0198311 Lupinus albus HOM05D005237 ORTHO05D006189 1.9e-34 150.2 95 76.8
Oeu000523.1 Olea europaea HOM05D005237 ORTHO05D006189 1.9e-34 150.2 90 81.1
Psat0s3428g0040 Pisum sativum HOM05D005237 ORTHO05D006189 1.9e-34 150.2 95 78.9
Lalb_Chr13g0301391 Lupinus albus HOM05D005237 ORTHO05D006189 2.5e-34 149.8 95 78.9
GSVIVG01012837001 Vitis vinifera HOM05D005237 ORTHO05D006189 2.5e-34 149.8 95 80.0
Atru.chr7.1980 Acer truncatum HOM05D005237 ORTHO05D006189 3.3e-34 149.4 96 77.1
PGR102G2022 Punica granatum HOM05D005237 ORTHO05D006189 3.3e-34 149.4 95 78.9
Sed0005481 Sechium edule HOM05D005237 ORTHO05D006189 3.3e-34 149.4 95 77.9
unitig_748.g7174 Utricularia gibba HOM05D005237 ORTHO05D006189 3.3e-34 149.4 96 78.1
CSS0004544 Camellia sinensis var. sinensis HOM05D005237 ORTHO05D006189 4.3e-34 149.1 93 81.7
MELO3C004473.2 Cucumis melo HOM05D005237 ORTHO05D006189 4.3e-34 149.1 94 77.7
CsaV3_2G003270 Cucumis sativus L. HOM05D005237 ORTHO05D006189 4.3e-34 149.1 95 76.8
Gohir.A08G089300 Gossypium hirsutum HOM05D005237 ORTHO05D006189 4.3e-34 149.1 93 78.5
Gorai.004G108300 Gossypium raimondii HOM05D005237 ORTHO05D006189 4.3e-34 149.1 93 78.5
Rhsim01G0059600 Rhododendron simsii HOM05D005237 ORTHO05D006189 4.3e-34 149.1 95 78.9
CANSAT11G1632 Cannabis sativa HOM05D005237 ORTHO05D006189 5.6e-34 148.7 93 77.4
Hma1.2p1_0343F.1_g130850 Hydrangea macrophylla HOM05D005237 ORTHO05D006189 5.6e-34 148.7 95 78.9
Zm00001eb238960 Zea mays HOM05D005237 ORTHO05D006189 5.6e-34 148.7 93 76.3
Zm00001eb238970 Zea mays HOM05D005237 ORTHO05D006189 5.6e-34 148.7 93 76.3
Zm00001eb438640 Zea mays HOM05D005237 ORTHO05D006189 5.6e-34 148.7 93 76.3
Zm00001eb438650 Zea mays HOM05D005237 ORTHO05D006189 5.6e-34 148.7 93 76.3
CDE04G0420 Ceratophyllum demersum HOM05D005237 ORTHO05D006189 7.4e-34 148.3 90 81.1
ClCG11G003410 Citrullus lanatus HOM05D005237 ORTHO05D006189 7.4e-34 148.3 95 76.8
PSO675G7544 Papaver somniferum HOM05D005237 ORTHO05D006189 7.4e-34 148.3 96 78.1
Phvul.003G171200 Phaseolus vulgaris HOM05D005237 ORTHO05D006189 7.4e-34 148.3 90 81.1
Potri.006G063400 Populus trichocarpa HOM05D005237 ORTHO05D006189 7.4e-34 148.3 95 78.9
Potri.018G123100 Populus trichocarpa HOM05D005237 ORTHO05D006189 7.4e-34 148.3 95 78.9
Sed0006539 Sechium edule HOM05D005237 ORTHO05D006189 7.4e-34 148.3 95 75.8
ATR0580G166 Amborella trichopoda HOM05D005237 ORTHO05D006189 1.3e-33 147.5 95 77.9
Os02g0235000 Oryza sativa ssp. japonica HOM05D005237 ORTHO05D006189 1.3e-33 147.5 103 71.8
SGA_v2.0_scaffold37G14721 Striga asiatica HOM05D005237 ORTHO05D006189 1.6e-33 147.1 95 77.9
Migut.K00410 Erythranthe guttata HOM05D005237 ORTHO05D006189 2.1e-33 146.7 89 79.8
Sabra18G0104800 Salix brachista HOM05D005237 ORTHO05D006189 2.1e-33 146.7 95 77.9
VMungo1215G1009 Vigna mungo HOM05D005237 ORTHO05D006189 2.1e-33 146.7 94 78.7
Zm00001eb238940 Zea mays HOM05D005237 ORTHO05D006189 2.1e-33 146.7 93 75.3
Cc07_g18400 Coffea canephora HOM05D005237 ORTHO05D006189 2.8e-33 146.4 90 80.0
CDE07G1573 Ceratophyllum demersum HOM05D005237 ORTHO05D006189 3.7e-33 146.0 90 80.0
Zm00001eb150940 Zea mays HOM05D005237 ORTHO05D006189 4.8e-33 145.6 93 75.3
EL10Ac8g18779 Beta vulgaris HOM05D005237 ORTHO05D006189 6.2e-33 145.2 95 74.7
SalBow1G1295 Salvia bowleyana HOM05D005237 ORTHO05D006189 6.2e-33 145.2 90 80.0
AUR62011203 Chenopodium quinoa HOM05D005237 ORTHO05D006189 8.2e-33 144.8 113 68.1
AUR62013284 Chenopodium quinoa HOM05D005237 ORTHO05D006189 1.1e-32 144.4 106 71.7
Lsat_1_v5_gn_8_61340 Lactuca sativa HOM05D005237 ORTHO05D006189 1.1e-32 144.4 91 74.7
SHI03217 Sapria himalayana HOM05D005237 ORTHO05D006189 1.1e-32 144.4 94 71.3
THA.LOC104815299 Tarenaya hassleriana HOM05D005237 ORTHO05D006189 1.4e-32 144.1 95 74.7
HanXRQChr06g0180531 Helianthus annuus HOM05D005237 ORTHO05D006189 1.8e-32 143.7 92 75.0
CiPaw.04G176700 Carya illinoinensis HOM05D005237 ORTHO05D006189 2.4e-32 143.3 99 72.7
Aqoxy7G00028 Aquilegia oxysepala HOM05D005237 ORTHO05D006189 3.1e-32 142.9 90 80.0
CARHR052620 Cardamine hirsuta HOM05D005237 ORTHO05D006189 3.1e-32 142.9 95 75.8
DCAR_009333 Daucus carota HOM05D005237 ORTHO05D006189 3.1e-32 142.9 90 76.7
Thhalv10023668m.g Eutrema salsugineum HOM05D005237 ORTHO05D006189 3.1e-32 142.9 95 75.8
Nn8g40617 Nelumbo nucifera HOM05D005237 ORTHO05D006189 3.1e-32 142.9 90 77.8
Sp2g04330 Schrenkiella parvula HOM05D005237 ORTHO05D006189 3.1e-32 142.9 95 75.8
Aa31LG2G10030 Aethionema arabicum HOM05D005237 ORTHO05D006189 4.0e-32 142.5 90 78.9
CAN.G1382.4 Capsicum annuum HOM05D005237 ORTHO05D006189 4.0e-32 142.5 88 80.7
BcaB07g31213 Brassica carinata HOM05D005237 ORTHO05D006189 5.3e-32 142.1 95 75.8
BcaC04g22225 Brassica carinata HOM05D005237 ORTHO05D006189 5.3e-32 142.1 95 75.8
A09p17560 Brassica napus HOM05D002152 ORTHO05D006189 5.3e-32 142.1 95 75.8
C09p21860 Brassica napus HOM05D002152 ORTHO05D006189 5.3e-32 142.1 95 75.8
BolC9t55091H Brassica oleracea HOM05D002152 ORTHO05D002737 5.3e-32 142.1 95 75.8
BraA09t37380Z Brassica rapa HOM05D002152 ORTHO05D006189 5.3e-32 142.1 95 75.8
Duzib187G1805 Durio zibethinus HOM05D005237 ORTHO05D006189 5.3e-32 142.1 108 70.4
Sabra06G0046100 Salix brachista HOM05D005237 ORTHO05D006189 5.3e-32 142.1 101 74.3
Zm00001eb238980 Zea mays HOM05D005237 ORTHO05D006189 5.3e-32 142.1 91 74.7
AL2G16270 Arabidopsis lyrata HOM05D005237 ORTHO05D006189 6.9e-32 141.7 95 75.8
AT1G60430 Arabidopsis thaliana HOM05D005237 ORTHO05D006189 6.9e-32 141.7 95 74.7
Carub.0002s0491 Capsella rubella HOM05D005237 ORTHO05D006189 6.9e-32 141.7 95 74.7
Sc18g0000220 Simmondsia chinensis HOM05D005237 ORTHO05D006189 6.9e-32 141.7 96 74.0
Peaxi162Scf00088g00918 Petunia axillaris HOM05D005237 ORTHO05D006189 9.0e-32 141.4 90 77.8
Solyc07g007630.3 Solanum lycopersicum HOM05D005237 ORTHO05D006189 9.0e-32 141.4 90 78.9
Sopen07g003620 Solanum pennellii HOM05D005237 ORTHO05D006189 9.0e-32 141.4 90 78.9
Nitab4.5_0000704g0070 Nicotiana tabacum HOM05D005237 ORTHO05D006189 1.2e-31 141.0 89 79.8
VMungo0251G3112 Vigna mungo HOM05D005237 ORTHO05D006189 1.2e-31 141.0 86 80.2
Nitab4.5_0002267g0030 Nicotiana tabacum HOM05D005237 ORTHO05D006189 2.0e-31 140.2 90 77.8
PGSC0003DMG400030712 Solanum tuberosum HOM05D005237 ORTHO05D006189 2.0e-31 140.2 90 77.8
Hund09300 Selenicereus undatus HOM05D005237 ORTHO05D006189 2.6e-31 139.8 95 73.7
SEGI_28631 Sequoiadendron giganteum HOM05D005237 ORTHO05D006189 2.6e-31 139.8 90 75.6
HPP92_021894 Vanilla planifolia HOM05D005237 ORTHO05D006189 2.6e-31 139.8 95 73.7
MSTRG.26338 Avicennia marina HOM05D005237 ORTHO05D006189 3.4e-31 139.4 96 72.9
ECA236G1442 Erigeron canadensis HOM05D005237 ORTHO05D006189 4.5e-31 139.0 92 75.0
TAR626G0602 Trochodendron aralioides HOM05D005237 ORTHO05D006189 5.8e-31 138.7 93 77.4
Ah.09g224420 Amaranthus hybridus HOM05D005237 ORTHO05D006189 1.3e-30 137.5 93 74.2
Gohir.D05G014800 Gossypium hirsutum HOM05D005237 ORTHO05D006189 3.8e-30 136.0 93 68.8
Gorai.009G014900 Gossypium raimondii HOM05D005237 ORTHO05D006189 3.8e-30 136.0 93 68.8
Gohir.A05G013700 Gossypium hirsutum HOM05D005237 ORTHO05D006189 8.4e-30 134.8 93 67.7
Sopen02g003910 Solanum pennellii HOM05D005237 ORTHO05D006189 1.1e-29 134.4 88 73.9
MBI14_g10734_MAGBIO Magnolia biondii HOM05D005237 ORTHO05D006189 3.2e-29 132.9 80 83.8
PGSC0003DMG400003270 Solanum tuberosum HOM05D005237 ORTHO05D006189 3.2e-29 132.9 88 71.6
Peaxi162Scf00113g00061 Petunia axillaris HOM05D005237 ORTHO05D006189 7.1e-29 131.7 88 73.9
Lsat_1_v5_gn_7_44340 Lactuca sativa HOM05D005237 ORTHO05D006189 2.1e-28 130.2 94 64.9
Pp3c10_12220 Physcomitrium patens HOM05D005237 ORTHO05D006189 6.7e-27 125.2 95 61.1
Solyc02g014540.3 Solanum lycopersicum HOM05D005237 ORTHO05D006189 2.5e-26 123.2 87 67.8
SMO356G0108 Selaginella moellendorffii HOM05D005237 ORTHO05D006189 7.4e-26 121.7 89 66.3
Duzib168G1377 Durio zibethinus HOM05D005237 ORTHO05D006189 1.6e-25 120.6 73 82.2
Pp3c3_23320 Physcomitrium patens HOM05D005237 ORTHO05D006189 2.2e-25 120.2 94 59.6
Mapoly0002s0013 Marchantia polymorpha HOM05D005237 ORTHO05D006189 9.0e-24 114.8 106 56.6
Thecc.09G135400 Theobroma cacao HOM05D005237 ORTHO05D006189 4.5e-15 85.9 53 77.4
Eucgr.I02126 Eucalyptus grandis HOM05D005237 ORTHO05D006189 1.0e-11 74.7 47 78.7
Medtr0320s0040 Medicago truncatula HOM05D005237 ORTHO05D006189 1.0e-11 74.7 55 70.9
Aa31LG9G5450 Aethionema arabicum HOM05D005237 ORTHO05D006189 3.0e-11 73.2 44 79.5
Eucgr.L01822 Eucalyptus grandis HOM05D005237 ORTHO05D006189 2.4e-08 63.5 36 86.1
Cre09.g397950 Chlamydomonas reinhardtii HOM05D005237 ORTHO05D006189 5.3e-08 62.4 105 38.1


User provided reference genes

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