Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 3.7e-196 688.0 329 100.0
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 9.0e-195 683.3 329 99.7
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 6.1e-191 670.6 327 98.2
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 1.0e-185 653.3 329 95.7
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 5.3e-179 630.9 326 93.3
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 4.2e-176 621.3 329 87.8
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 5.9e-170 600.9 329 85.7
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 4.2e-168 594.7 329 83.9
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 3.0e-166 588.6 329 83.9
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 1.7e-164 582.8 329 81.5
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 6.3e-164 580.9 328 83.2
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 1.4e-163 579.7 329 81.5
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 9.1e-163 577.0 329 81.2
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 1.2e-162 576.6 328 81.4
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 3.5e-162 575.1 329 81.2
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 4.5e-162 574.7 330 80.9
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 7.7e-162 573.9 329 82.1
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 1.3e-161 573.2 327 80.7
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 8.5e-161 570.5 329 82.1
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 1.1e-160 570.1 327 81.0
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.5e-160 569.7 328 79.0
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 1.5e-160 569.7 327 80.4
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.5e-160 569.7 327 80.1
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 2.5e-160 568.9 328 80.8
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 7.2e-160 567.4 328 78.7
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 9.4e-160 567.0 318 83.0
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 9.4e-160 567.0 318 83.0
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 4.7e-159 564.7 329 81.2
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 8.0e-159 563.9 329 78.4
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.0e-158 563.5 329 79.0
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 2.3e-158 562.4 328 80.5
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 8.8e-158 560.5 329 78.7
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 2.0e-157 559.3 328 78.7
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 2.0e-157 559.3 329 79.6
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 5.7e-157 557.8 329 77.2
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.3e-156 556.6 330 79.7
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 2.2e-156 555.8 329 78.7
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 3.7e-156 555.1 329 79.0
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 1.4e-155 553.1 331 78.2
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 5.4e-155 551.2 342 79.2
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 7.0e-155 550.8 329 76.9
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.2e-154 550.1 329 77.8
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 3.5e-154 548.5 328 78.4
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 5.9e-154 547.7 309 81.2
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 7.7e-154 547.4 331 77.0
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 7.7e-154 547.4 326 76.7
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 7.7e-154 547.4 329 76.6
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 7.7e-154 547.4 331 77.0
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 1.0e-153 547.0 329 79.6
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 1.3e-153 546.6 328 78.4
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 5.0e-153 544.7 331 77.6
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.5e-152 543.1 329 77.5
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 2.5e-152 542.3 329 76.0
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 3.2e-152 542.0 327 78.0
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 4.2e-152 541.6 329 75.4
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 7.2e-152 540.8 326 76.1
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 4.7e-151 538.1 331 75.8
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 2.3e-150 535.8 336 74.1
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 8.8e-150 533.9 331 75.5
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.5e-149 533.1 331 75.2
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 3.4e-149 531.9 332 75.6
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 9.8e-149 530.4 347 72.6
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 2.2e-148 529.3 342 72.8
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 6.3e-148 527.7 329 72.9
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.4e-147 526.6 329 75.1
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 1.4e-147 526.6 339 73.2
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 1.4e-147 526.6 329 75.1
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 7.0e-147 524.2 329 74.5
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 2.0e-146 522.7 329 74.2
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 5.9e-146 521.2 319 76.5
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 1.1e-144 516.9 329 75.4
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.9e-144 516.2 329 73.6
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 9.5e-144 513.8 327 74.0
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.8e-143 512.3 327 73.7
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 4.7e-143 511.5 329 72.3
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 5.2e-142 508.1 314 74.5
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 5.2e-142 508.1 298 78.2
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 4.4e-141 505.0 329 70.8
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 6.4e-140 501.1 329 70.2
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 4.1e-139 498.4 329 69.9
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.6e-138 496.5 329 72.3
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 3.5e-138 495.4 329 69.3
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.0e-137 493.8 329 71.4
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 2.3e-137 492.7 327 69.7
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 6.6e-137 491.1 316 72.5
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 5.6e-136 488.0 314 73.9
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 1.0e-129 467.2 329 70.5
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 2.1e-127 459.5 254 84.3
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 4.9e-124 448.4 256 81.6
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 4.9e-124 448.4 326 63.5
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 8.3e-124 447.6 326 63.2
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 1.1e-120 437.2 303 66.3
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 3.3e-120 435.6 255 78.8
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 3.3e-120 435.6 257 78.2
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 1.8e-118 429.9 318 64.8
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.2e-117 427.2 308 64.0
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 2.6e-117 426.0 329 64.4
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 2.6e-117 426.0 329 58.7
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 1.9e-115 419.9 278 70.1
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 2.8e-111 406.0 255 75.3
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.8e-110 403.3 242 77.3
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 5.8e-109 398.3 309 59.5
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.1e-107 394.0 318 56.0
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.3e-100 370.5 221 80.1
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 4.5e-93 345.5 199 80.9
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 6.7e-89 331.6 319 50.8
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 1.4e-78 297.4 166 77.7
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 4.1e-62 242.7 145 82.8
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 1.6e-58 230.7 132 81.8
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 5.7e-48 195.7 115 76.5
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 2.4e-46 190.3 292 39.0
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 3.5e-45 186.4 142 55.6
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 2.5e-43 180.3 309 35.9
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.4e-38 164.5 306 33.3
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 4.4e-32 142.9 82 78.0
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 5.7e-32 142.5 111 66.7
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 1.4e-30 137.9 109 56.0
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 3.1e-30 136.7 78 83.3
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 3.8e-28 129.8 133 51.1
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 4.0e-25 119.8 72 73.6
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.7e-23 114.4 68 67.6
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 6.6e-20 102.4 58 75.9
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 4.6e-13 79.7 69 53.6
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.5e-11 73.9 62 61.3
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 9.9e-08 62.0 40 62.5
Rhsim11G0068700 Rhododendron simsii HOM05D006264 ORTHO05D007739 6.4e-07 59.3 39 71.8


User provided reference genes

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