Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G0407 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.2e-148 530.0 306 100.0
FAN20G1442 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.2e-148 530.0 306 100.0
FAN20G2254 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.2e-148 530.0 306 100.0
FAN20G2361 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.2e-148 530.0 306 100.0
FvH4_2g04910 Fragaria vesca HOM05D005305 ORTHO05D006394 8.3e-126 454.1 315 82.2
FAN24G2323 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.5e-114 416.8 251 90.0
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 1.7e-46 190.7 157 68.8
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.2e-46 190.3 157 68.2
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.2e-45 186.0 219 55.7
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.5e-42 177.6 183 59.0
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 2.0e-42 177.2 312 41.0
FvH4_2g02380 Fragaria vesca HOM05D005305 ORTHO05D006394 2.8e-41 173.3 308 40.9
FAN15G2678 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.7e-41 172.9 306 41.2
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 1.5e-39 167.5 226 52.7
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.2e-37 159.5 155 59.4
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 3.1e-32 143.3 195 49.2
FAN02G3216 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.8e-30 136.3 159 54.7
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 1.1e-29 134.8 157 51.6
FAN02G0608 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.5e-23 112.8 97 64.9
FvH4_4g13350 Fragaria vesca HOM05D005305 ORTHO05D006394 1.3e-22 111.3 128 55.5
FAN02G4273 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.5e-22 109.0 96 63.5
FAN05G3957 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.8e-19 99.0 97 58.8
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 1.5e-18 97.8 178 39.3
FvH4_4g36551 Fragaria vesca HOM05D005305 ORTHO05D006394 4.4e-18 96.3 144 45.1
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 9.8e-18 95.1 158 44.3
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 6.3e-17 92.4 177 40.7
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 1.4e-16 91.3 162 38.9
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 3.1e-16 90.1 188 38.3
FAN12G4281 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.5e-15 86.3 143 40.6
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 4.5e-15 86.3 200 35.0
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 5.9e-15 85.9 185 36.8
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 5.9e-15 85.9 177 40.7
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 7.7e-15 85.5 182 36.3
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 7.7e-15 85.5 186 36.6
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 7.7e-15 85.5 182 36.3
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 7.7e-15 85.5 182 36.3
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 1.0e-14 85.1 187 36.4
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 1.0e-14 85.1 190 33.7
FAN12G2268 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.3e-14 84.7 101 51.5
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 1.7e-14 84.3 184 34.2
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 1.7e-14 84.3 184 34.2
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 2.3e-14 84.0 189 36.5
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 2.3e-14 84.0 186 36.0
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 2.9e-14 83.6 190 32.6
FvH4_4g36540 Fragaria vesca HOM05D005305 ORTHO05D006394 3.8e-14 83.2 101 50.5
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 8.6e-14 82.0 219 31.1
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 1.1e-13 81.6 220 30.9
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 1.5e-13 81.3 165 37.0
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 1.5e-13 81.3 138 37.7
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 1.9e-13 80.9 170 35.3
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 3.3e-13 80.1 187 36.4
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 1.6e-12 77.8 184 34.2
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 3.6e-12 76.6 178 34.3
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 3.6e-12 76.6 178 34.3
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 3.6e-12 76.6 178 34.3
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 6.1e-12 75.9 156 35.9
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 6.1e-12 75.9 157 35.7
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 6.1e-12 75.9 168 36.9
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 8.0e-12 75.5 175 34.9
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 1.0e-11 75.1 193 31.6
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 1.8e-11 74.3 185 34.6
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 6.8e-11 72.4 175 34.9
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 6.8e-11 72.4 136 38.2
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 8.9e-11 72.0 164 33.5
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 8.9e-11 72.0 128 38.3
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 8.9e-11 72.0 216 31.0
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 1.2e-10 71.6 159 34.6
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 1.5e-10 71.2 163 37.4
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 2.0e-10 70.9 184 33.2
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 2.0e-10 70.9 193 35.8
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 3.4e-10 70.1 184 32.6
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 5.7e-10 69.3 168 34.5
FvH4_3g08610 Fragaria vesca HOM05D005305 ORTHO05D006394 9.8e-10 68.6 103 44.7
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 1.3e-09 68.2 188 34.6
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 1.7e-09 67.8 189 32.8
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 1.7e-09 67.8 171 34.5
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 3.7e-09 66.6 164 35.4
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 4.9e-09 66.2 188 31.4
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 6.3e-09 65.9 166 33.1
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 8.3e-09 65.5 154 33.1
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 8.3e-09 65.5 154 33.8
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 8.3e-09 65.5 182 34.1
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 1.4e-08 64.7 149 30.9
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 1.8e-08 64.3 164 34.8
C02p49000 Brassica napus HOM05D005305 ORTHO05D006394 3.2e-08 63.5 78 44.9
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 3.2e-08 63.5 163 31.9
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 4.1e-08 63.2 128 35.2
FAN11G0652 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.4e-08 62.8 112 42.0
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 2.0e-07 60.8 157 35.0
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 2.7e-07 60.5 169 32.0
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 4.6e-07 59.7 166 31.3
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 4.6e-07 59.7 171 31.0
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 1.3e-06 58.2 165 30.9
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 5.0e-06 56.2 163 27.6
Thecc.01G118700 Theobroma cacao HOM05D005305 ORTHO05D006394 5.0e-06 56.2 166 31.3
ECA234G0387 Erigeron canadensis HOM05D005305 ORTHO05D006394 6.6e-06 55.8 162 32.7
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 6.6e-06 55.8 134 32.1
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 8.6e-06 55.5 149 32.9


User provided reference genes

Program Settings