Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 0.0e+00 1186.8 701 100.0
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.2e-231 807.0 719 71.6
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 4.0e-192 675.6 424 88.0
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 3.1e-184 649.4 461 80.5
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 4.9e-182 642.1 423 83.7
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 2.4e-152 543.5 420 73.8
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 1.6e-148 530.8 424 71.5
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 8.8e-131 471.9 330 76.4
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 1.5e-130 471.1 427 63.9
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 1.5e-130 471.1 427 63.9
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 3.1e-128 463.4 328 73.8
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 3.1e-128 463.4 333 75.4
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 1.3e-126 458.0 330 74.2
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 2.2e-126 457.2 337 73.9
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 8.5e-126 455.3 337 72.1
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 1.1e-125 454.9 424 65.3
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 1.5e-125 454.5 410 68.0
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 1.9e-125 454.1 422 63.3
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 1.6e-124 451.1 326 74.5
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 2.1e-124 450.7 433 65.1
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 2.1e-124 450.7 422 64.5
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 3.6e-124 449.9 333 73.6
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 3.6e-124 449.9 361 68.1
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 6.1e-124 449.1 332 72.6
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.0e-123 448.4 490 65.3
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 4.0e-123 446.4 335 70.7
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 8.8e-123 445.3 380 65.3
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 8.8e-123 445.3 416 63.0
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 8.8e-123 445.3 321 73.2
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 8.8e-123 445.3 449 60.8
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 2.0e-122 444.1 325 72.9
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 2.0e-122 444.1 394 64.2
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 2.6e-122 443.7 328 72.9
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 5.7e-122 442.6 334 71.3
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 7.5e-122 442.2 326 73.0
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 7.5e-122 442.2 334 72.8
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 9.8e-122 441.8 369 67.2
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 1.3e-121 441.4 330 72.1
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 1.7e-121 441.0 413 62.7
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 1.7e-121 441.0 434 62.4
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 2.2e-121 440.7 337 71.5
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 2.8e-121 440.3 333 71.2
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 3.7e-121 439.9 327 71.9
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 6.3e-121 439.1 373 67.8
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 1.8e-120 437.6 421 65.1
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 4.1e-120 436.4 406 64.5
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 9.1e-120 435.3 326 72.1
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 1.6e-119 434.5 436 60.1
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 1.6e-119 434.5 339 70.5
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 5.9e-119 432.6 329 69.9
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.0e-118 431.8 324 71.3
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 6.5e-118 429.1 324 71.6
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 1.9e-117 427.6 366 65.6
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 4.2e-117 426.4 429 58.7
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 9.4e-117 425.2 428 58.6
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.2e-116 424.9 402 61.4
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 1.6e-116 424.5 316 71.8
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 1.6e-116 424.5 440 58.2
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 2.1e-116 424.1 323 71.2
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 4.7e-116 422.9 358 65.6
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 1.8e-115 421.0 323 70.6
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.3e-115 420.6 503 66.2
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 4.0e-115 419.9 335 67.2
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 8.8e-115 418.7 357 66.1
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 1.3e-113 414.8 339 68.4
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 2.8e-113 413.7 337 67.7
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 1.4e-112 411.4 433 57.0
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 1.4e-112 411.4 335 68.4
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 3.1e-112 410.2 327 69.1
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 7.0e-112 409.1 444 57.9
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 5.9e-111 406.0 350 65.1
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 5.9e-111 406.0 439 59.7
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 5.0e-110 402.9 437 60.2
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.5e-109 401.4 434 59.9
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.5e-109 401.4 458 53.5
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 5.5e-109 399.4 437 60.0
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 2.1e-108 397.5 462 57.4
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 2.1e-108 397.5 435 59.1
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 2.8e-108 397.1 434 59.0
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 2.3e-107 394.0 415 57.6
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 6.8e-107 392.5 460 62.6
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 6.8e-107 392.5 405 57.3
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 6.3e-105 386.0 468 55.8
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 8.3e-105 385.6 329 65.0
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 1.1e-104 385.2 329 63.8
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 1.4e-104 384.8 329 64.4
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 1.4e-104 384.8 477 53.9
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 4.6e-103 379.8 402 59.0
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 1.5e-101 374.8 435 57.2
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 9.8e-98 362.1 644 43.8
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 9.5e-93 345.5 315 58.7
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 3.6e-92 343.6 249 73.5
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.2e-90 338.6 324 56.2
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 5.8e-90 336.3 408 50.7
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 7.5e-90 335.9 285 66.7
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 1.7e-89 334.7 274 68.6
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 9.2e-88 328.9 270 66.7
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 1.7e-78 298.1 384 51.0
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 5.6e-77 293.1 378 52.1
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 7.6e-74 282.7 308 51.3
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.5e-66 258.5 172 75.0
FvH4_2g37377 Fragaria vesca HOM05D008997 ORTHO05D011051 8.4e-65 252.7 138 92.8
FAN21G1189 Fragaria x ananassa HOM05D008997 ORTHO05D011051 3.5e-63 247.3 146 87.7
FAN21G1803 Fragaria x ananassa HOM05D008997 ORTHO05D011051 3.5e-63 247.3 138 91.3
FAN27G1108 Fragaria x ananassa HOM05D008997 ORTHO05D011051 7.3e-61 239.6 153 83.0
FAN21G1848 Fragaria x ananassa HOM05D008997 ORTHO05D011051 8.1e-60 236.1 153 81.7
RcHm_v2.0_Chr6g0304331 Rosa chinensis HOM05D008997 ORTHO05D011051 4.0e-59 233.8 138 87.7
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 1.3e-57 228.8 322 47.8
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 1.5e-53 215.3 177 66.7
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 8.1e-52 209.5 179 63.7
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 7.6e-50 203.0 174 63.8
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 1.4e-48 198.7 141 68.1
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 1.1e-32 146.0 278 35.6
Prupe.1G353500 Prunus persica HOM05D008997 ORTHO05D011051 1.5e-29 135.6 140 55.0
MD08G1001500 Malus domestica HOM05D008997 ORTHO05D011051 2.4e-27 128.3 144 52.1
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 3.1e-27 127.9 116 66.4
MD15G1000800 Malus domestica HOM05D008997 ORTHO05D011051 5.9e-26 123.6 144 50.7
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 7.7e-26 123.2 188 48.4
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 2.5e-24 118.2 88 69.3
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 6.7e-22 110.2 113 61.1
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 7.4e-21 106.7 89 69.7
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 3.7e-20 104.4 92 66.3
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 2.4e-19 101.7 60 80.0
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 1.2e-18 99.4 88 64.8
Lalb_Chr05g0215081 Lupinus albus HOM05D008997 ORTHO05D011051 3.8e-17 94.4 130 42.3
Lalb_Chr09g0324991 Lupinus albus HOM05D008997 ORTHO05D011051 5.0e-17 94.0 130 42.3
Glyma.11G090500 Glycine max HOM05D008997 ORTHO05D011051 2.5e-16 91.7 110 47.3
Medtr5g025520 Medicago truncatula HOM05D008997 ORTHO05D011051 4.2e-16 90.9 122 45.9
Phvul.002G121500 Phaseolus vulgaris HOM05D008997 ORTHO05D011051 7.2e-16 90.1 128 44.5
CiPaw.11G075100 Carya illinoinensis HOM05D008997 ORTHO05D011051 1.2e-15 89.4 143 42.0
Psat2g145480 Pisum sativum HOM05D008997 ORTHO05D011051 1.6e-15 89.0 136 43.4
VMungo0464G1626 Vigna mungo HOM05D008997 ORTHO05D011051 1.6e-15 89.0 132 43.9
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 2.1e-15 88.6 39 100.0
Ca_25045_v3 Cicer arietinum L. HOM05D008997 ORTHO05D011051 6.1e-15 87.0 129 44.2
TPR.G8981 Trifolium pratense HOM05D008997 ORTHO05D011051 6.1e-15 87.0 132 40.2
Phvul.004G038900 Phaseolus vulgaris HOM05D008997 ORTHO05D011051 1.0e-14 86.3 128 43.0
QL12p004181 Quercus lobata HOM05D008997 ORTHO05D011051 8.8e-14 83.2 102 47.1
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 1.5e-13 82.4 49 83.7
Lj2g0013331 Lotus japonicus HOM05D008997 ORTHO05D011051 2.6e-13 81.6 140 38.6
Sed0009134 Sechium edule HOM05D008997 ORTHO05D011051 7.5e-13 80.1 86 44.2
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 1.3e-12 79.3 49 81.6
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 2.2e-12 78.6 190 33.7
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 2.7e-10 71.6 39 84.6
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 5.9e-10 70.5 136 32.4
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 7.7e-10 70.1 67 59.7
Thecc.03G319000 Theobroma cacao HOM05D008997 ORTHO05D011051 1.3e-09 69.3 93 41.9
Atru.chr8.2628 Acer truncatum HOM05D008997 ORTHO05D011051 1.7e-09 68.9 112 43.8
Eucgr.D02561 Eucalyptus grandis HOM05D008997 ORTHO05D011051 2.9e-09 68.2 105 41.0
COL.COLO4_11281 Corchorus olitorius HOM05D008997 ORTHO05D011051 3.8e-09 67.8 79 46.8
PGR031G0389 Punica granatum HOM05D008997 ORTHO05D011051 6.5e-09 67.0 101 43.6
Ciclev10013116m.g Citrus clementina HOM05D008997 ORTHO05D011051 8.5e-09 66.6 70 48.6
arahy.Tifrunner.gnm1.ann1.G1G4QR Arachis hypogaea HOM05D008997 ORTHO05D011051 1.9e-08 65.5 178 33.1
arahy.Tifrunner.gnm1.ann1.QSM4Y5 Arachis hypogaea HOM05D008997 ORTHO05D011051 1.9e-08 65.5 178 33.1
Manes.10G091000 Manihot esculenta HOM05D008997 ORTHO05D011051 2.1e-07 62.0 121 36.4
Sabra05G0064400 Salix brachista HOM05D008997 ORTHO05D011051 3.6e-07 61.2 87 40.2
Potri.005G078400 Populus trichocarpa HOM05D008997 ORTHO05D011051 8.8e-06 56.6 87 37.9


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