Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 0.0e+00 1300.0 639 100.0
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.9e-294 1015.4 644 81.1
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 6.1e-288 993.8 630 80.6
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 7.7e-283 976.9 630 79.4
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 5.7e-254 880.9 631 70.8
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 3.9e-210 735.3 633 59.6
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 1.9e-204 716.5 635 58.4
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 1.9e-196 689.9 643 56.8
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 8.7e-194 681.0 633 55.9
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 2.8e-184 649.4 635 53.2
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 2.0e-182 643.3 633 51.8
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 8.5e-181 637.9 635 52.9
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.3e-178 630.6 634 52.2
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 1.1e-172 610.9 632 50.2
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 4.2e-172 609.0 633 49.8
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 7.2e-172 608.2 633 50.4
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 9.4e-172 607.8 633 49.8
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 9.4e-172 607.8 633 49.6
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 2.1e-171 606.7 634 50.5
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 3.6e-171 605.9 634 50.3
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 1.0e-170 604.4 633 50.6
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 6.7e-170 601.7 633 49.4
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 6.7e-170 601.7 633 49.4
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 3.3e-169 599.4 633 50.4
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 4.4e-169 599.0 636 49.5
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 4.4e-169 599.0 633 49.8
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 1.3e-168 597.4 633 47.9
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.2e-168 596.7 633 48.8
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 2.8e-168 596.3 635 49.4
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 2.8e-168 596.3 633 49.0
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 3.7e-168 595.9 638 50.8
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 1.1e-167 594.3 633 49.0
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 1.4e-167 594.0 636 49.5
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 1.4e-167 594.0 633 47.7
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 6.9e-167 591.7 633 48.5
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 2.6e-166 589.7 632 49.2
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 5.0e-165 585.5 634 49.2
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 1.9e-164 583.6 634 47.5
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 2.1e-163 580.1 632 48.6
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 1.4e-162 577.4 634 47.5
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 1.4e-162 577.4 633 48.7
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 1.8e-162 577.0 637 48.2
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 3.9e-162 575.9 632 48.4
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.3e-160 570.9 633 48.2
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 1.7e-160 570.5 636 46.5
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 2.8e-160 569.7 635 47.1
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 2.8e-160 569.7 630 48.9
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 3.7e-160 569.3 633 47.1
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 6.3e-160 568.5 636 46.5
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 1.1e-159 567.8 635 46.6
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 1.1e-159 567.8 631 47.4
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 2.4e-159 566.6 635 45.8
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 7.0e-159 565.1 636 46.2
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 1.2e-158 564.3 626 47.0
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 4.5e-158 562.4 635 45.4
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 6.5e-157 558.5 630 48.6
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 3.2e-156 556.2 563 52.0
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 3.2e-156 556.2 633 46.9
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 4.2e-156 555.8 635 45.8
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 5.5e-156 555.4 630 48.1
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 1.2e-155 554.3 633 46.9
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 1.2e-155 554.3 656 45.0
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 2.1e-155 553.5 633 46.1
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 2.1e-155 553.5 598 47.8
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 3.6e-155 552.7 631 46.3
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 4.7e-155 552.4 635 45.7
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 1.8e-154 550.4 638 47.0
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 1.8e-154 550.4 636 46.7
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 6.7e-154 548.5 630 47.3
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 7.5e-153 545.0 630 47.6
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 6.3e-152 542.0 632 48.7
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 1.4e-151 540.8 630 46.7
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 5.9e-150 535.4 650 44.6
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 7.7e-150 535.0 634 45.3
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 1.7e-149 533.9 630 44.1
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 2.9e-149 533.1 633 46.3
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 2.9e-149 533.1 634 45.3
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 2.1e-147 526.9 630 44.4
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 4.7e-147 525.8 521 52.2
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 3.0e-146 523.1 634 44.5
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 1.5e-145 520.8 641 45.7
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 1.4e-143 514.2 557 48.3
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 4.1e-143 512.7 641 45.1
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 9.1e-143 511.5 637 44.7
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 1.6e-142 510.8 634 43.4
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 2.1e-139 500.4 630 42.4
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 1.4e-135 487.6 635 42.4
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 3.5e-134 483.0 645 44.3
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 9.8e-129 464.9 549 42.8
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 1.0e-125 454.9 563 44.4
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 3.3e-124 449.9 636 40.6
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.4e-119 433.7 542 45.8
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 3.9e-117 426.4 625 42.6
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 3.9e-117 426.4 648 40.4
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 3.3e-116 423.3 645 39.5
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 1.2e-115 421.4 560 41.2
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.5e-108 397.9 280 67.9
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 2.1e-107 394.0 637 38.9
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 7.1e-103 379.0 572 36.4
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 2.9e-88 330.5 492 39.4
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 3.5e-78 297.0 220 65.5
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 3.9e-77 293.5 639 31.9
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.4e-71 275.0 275 51.3
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 9.3e-71 272.3 292 48.3
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 3.1e-66 257.3 260 49.2
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 3.6e-62 243.8 273 46.9
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 5.1e-61 240.0 265 46.8
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 1.1e-52 212.2 179 57.0
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 1.8e-45 188.3 247 40.5
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.7e-43 181.8 182 53.8
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 2.4e-42 177.9 109 73.4
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 1.4e-34 152.1 197 44.2
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.2e-28 132.5 76 80.3
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 4.8e-27 127.1 110 49.1
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 2.2e-19 101.7 125 44.8
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 4.1e-18 97.4 65 66.2
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 4.0e-13 80.9 100 48.0
PSO801G0231 Papaver somniferum HOM05D006431 ORTHO05D007918 1.2e-09 69.3 200 28.0
VMungo1383G3444 Vigna mungo HOM05D006431 ORTHO05D007918 1.2e-09 69.3 199 26.1
PSO801G0006 Papaver somniferum HOM05D006431 ORTHO05D007918 1.6e-09 68.9 200 28.0
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 1.1e-07 62.8 36 75.0
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 8.0e-06 56.6 94 29.8


User provided reference genes

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