Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.1e-47 190.7 91 100.0
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 3.4e-27 124.8 61 98.4
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 1.4e-25 119.4 61 91.8
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.4e-25 119.4 61 91.8
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.4e-25 119.4 61 91.8
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.4e-25 119.4 61 91.8
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.4e-25 119.4 61 91.8
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.5e-25 118.6 61 91.8
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 3.2e-25 118.2 61 90.2
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 5.5e-25 117.5 74 74.3
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 6.0e-24 114.0 74 73.0
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 3.9e-23 111.3 74 67.6
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 1.5e-22 109.4 74 67.6
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 3.3e-22 108.2 74 66.2
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 4.3e-22 107.8 74 67.6
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 4.3e-22 107.8 74 66.2
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 5.7e-22 107.5 74 62.2
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 5.7e-22 107.5 73 68.5
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 5.7e-22 107.5 73 68.5
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 5.7e-22 107.5 73 68.5
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 7.4e-22 107.1 74 67.6
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 7.4e-22 107.1 74 66.2
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 7.4e-22 107.1 74 66.2
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 7.4e-22 107.1 74 66.2
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 9.7e-22 106.7 74 64.9
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 9.7e-22 106.7 74 64.9
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 9.7e-22 106.7 74 66.2
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.3e-21 106.3 61 78.7
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.3e-21 106.3 74 66.2
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.3e-21 106.3 74 66.2
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 1.3e-21 106.3 61 78.7
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.3e-21 106.3 74 66.2
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.3e-21 106.3 74 66.2
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.3e-21 106.3 74 66.2
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.3e-21 106.3 74 66.2
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 1.6e-21 105.9 74 64.9
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.6e-21 105.9 74 66.2
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.6e-21 105.9 74 66.2
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 1.6e-21 105.9 74 66.2
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 2.2e-21 105.5 74 66.2
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 2.2e-21 105.5 74 63.5
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 2.2e-21 105.5 74 64.9
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 2.8e-21 105.1 61 78.7
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 3.7e-21 104.8 74 62.2
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 3.7e-21 104.8 74 62.2
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 3.7e-21 104.8 74 63.5
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 3.7e-21 104.8 74 63.5
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 3.7e-21 104.8 74 63.5
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 4.8e-21 104.4 72 65.3
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 4.8e-21 104.4 62 74.2
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 4.8e-21 104.4 74 63.5
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 6.3e-21 104.0 74 60.8
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 6.3e-21 104.0 74 62.2
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 6.3e-21 104.0 74 63.5
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 8.2e-21 103.6 74 62.2
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 8.2e-21 103.6 74 62.2
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 8.2e-21 103.6 74 62.2
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 8.2e-21 103.6 74 63.5
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 8.2e-21 103.6 61 75.4
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 1.1e-20 103.2 74 60.8
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 1.1e-20 103.2 61 75.4
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 1.1e-20 103.2 74 64.9
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 1.4e-20 102.8 74 60.8
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.4e-20 102.8 74 62.2
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.4e-20 102.8 74 60.8
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 1.4e-20 102.8 74 63.5
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 1.8e-20 102.4 74 63.5
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 2.4e-20 102.1 74 60.8
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 2.4e-20 102.1 61 75.4
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 2.4e-20 102.1 74 60.8
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 2.4e-20 102.1 61 73.8
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 3.1e-20 101.7 59 76.3
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 3.1e-20 101.7 74 60.8
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 3.1e-20 101.7 74 62.2
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 4.1e-20 101.3 74 58.1
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 4.1e-20 101.3 73 61.6
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 5.3e-20 100.9 61 75.4
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 5.3e-20 100.9 74 60.8
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.3e-20 100.9 61 72.1
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 5.3e-20 100.9 74 60.8
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 6.9e-20 100.5 74 62.2
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 9.0e-20 100.1 74 60.8
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 1.2e-19 99.8 74 59.5
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 1.2e-19 99.8 74 60.8
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 1.5e-19 99.4 67 65.7
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 2.6e-19 98.6 74 55.4
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 3.4e-19 98.2 74 60.8
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 3.4e-19 98.2 73 58.9
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 3.4e-19 98.2 74 62.2
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 3.4e-19 98.2 61 72.1
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 7.6e-19 97.1 61 70.5
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 1.0e-18 96.7 61 73.8
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 1.3e-18 96.3 64 67.2
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 1.7e-18 95.9 74 55.4
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 1.7e-18 95.9 74 55.4
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 1.7e-18 95.9 74 59.5
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 2.2e-18 95.5 74 56.8
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 2.9e-18 95.1 74 59.5
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 3.8e-18 94.7 74 56.8
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 3.8e-18 94.7 61 68.9
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.8e-18 94.7 61 68.9
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 5.0e-18 94.4 61 70.5
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 6.5e-18 94.0 61 70.5
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.5e-18 93.6 74 59.5
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 8.5e-18 93.6 61 68.9
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 1.1e-17 93.2 74 56.8
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.4e-17 92.8 61 72.1
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.9e-17 92.4 75 57.3
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 3.2e-17 91.7 74 59.5
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 7.2e-17 90.5 74 58.1
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 9.3e-17 90.1 74 58.1
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 9.3e-17 90.1 74 54.1
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 1.2e-16 89.7 72 58.3
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 1.2e-16 89.7 72 58.3
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 1.2e-16 89.7 72 58.3
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 1.6e-16 89.4 61 67.2
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 1.6e-16 89.4 72 58.3
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 1.6e-16 89.4 72 58.3
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 1.6e-16 89.4 72 58.3
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 1.6e-16 89.4 72 58.3
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 1.6e-16 89.4 72 58.3
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 1.6e-16 89.4 74 55.4
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.6e-16 89.4 74 52.7
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.6e-16 89.4 74 52.7
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 3.6e-16 88.2 59 69.5
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.0e-15 86.7 72 55.6
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 3.9e-15 84.7 74 48.6
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 8.8e-15 83.6 61 62.3
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 3.3e-14 81.6 74 50.0
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 9.7e-14 80.1 62 59.7
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 4.1e-12 74.7 61 49.2
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 6.9e-12 73.9 47 70.2
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 5.9e-11 70.9 67 52.2
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 1.4e-07 59.7 50 58.0
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 2.3e-07 58.9 37 75.7


User provided reference genes

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