Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G3034 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.9e-38 163.7 180 100.0
FvH4_1g25270 Fragaria vesca HOM05D003347 ORTHO05D003821 5.0e-31 139.0 180 91.7
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 7.5e-19 98.6 180 60.6
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 2.3e-15 87.0 163 63.8
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.2e-13 81.3 73 67.1
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 2.3e-12 77.0 173 54.9
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 3.4e-11 73.2 72 59.7
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 4.4e-11 72.8 177 49.7
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.7e-10 70.9 71 60.6
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 2.2e-10 70.5 166 60.2
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 2.2e-10 70.5 73 65.8
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 4.9e-10 69.3 175 37.1
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 1.4e-09 67.8 54 72.2
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 2.4e-09 67.0 112 43.8
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 3.2e-09 66.6 73 50.7
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 7.0e-09 65.5 71 59.2
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 7.0e-09 65.5 175 58.3
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 9.2e-09 65.1 73 57.5
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.2e-08 64.7 170 54.7
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 2.1e-08 63.9 50 70.0
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 2.7e-08 63.5 51 70.6
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 2.7e-08 63.5 50 72.0
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 3.5e-08 63.2 50 70.0
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 4.6e-08 62.8 71 54.9
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 1.0e-07 61.6 62 61.3
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 1.3e-07 61.2 73 52.1
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 2.3e-07 60.5 71 57.7
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 3.0e-07 60.1 73 52.1
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 3.0e-07 60.1 73 52.1
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 3.0e-07 60.1 60 58.3
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 3.9e-07 59.7 73 50.7
Pp3c15_6590 Physcomitrium patens HOM05D003347 ORTHO05D003821 3.9e-07 59.7 72 54.2
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 5.0e-07 59.3 71 57.7
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 5.0e-07 59.3 164 59.1
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 5.0e-07 59.3 51 66.7
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 5.0e-07 59.3 73 49.3
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 6.6e-07 58.9 62 58.1
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 6.6e-07 58.9 50 66.0
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 8.6e-07 58.5 73 52.1
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 8.6e-07 58.5 69 55.1
CARHR200100 Cardamine hirsuta HOM05D012923 ORTHO05D014747 1.1e-06 58.2 50 66.0
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 1.1e-06 58.2 50 68.0
Sabra19G0015000 Salix brachista HOM05D003347 ORTHO05D003821 1.1e-06 58.2 142 73.2
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 1.1e-06 58.2 71 50.7
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 1.1e-06 58.2 71 53.5
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.5e-06 57.8 73 47.9
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.5e-06 57.8 73 47.9
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 1.5e-06 57.8 73 57.5
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 2.5e-06 57.0 60 58.3
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 3.3e-06 56.6 50 64.0
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 3.3e-06 56.6 50 64.0
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 4.3e-06 56.2 175 56.0
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 4.3e-06 56.2 50 62.0
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 5.6e-06 55.8 50 66.0
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 9.5e-06 55.1 73 46.6


User provided reference genes

Program Settings