Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G2834 Fragaria x ananassa HOM05D002414 ORTHO05D002531 6.2e-55 217.2 112 100.0
FvH4_1g25680 Fragaria vesca HOM05D002414 ORTHO05D002531 4.8e-47 191.0 95 98.9
FAN26G0802 Fragaria x ananassa HOM05D002414 ORTHO05D002531 2.6e-45 185.3 95 95.8
FAN23G0249 Fragaria x ananassa HOM05D002414 ORTHO05D002531 7.6e-45 183.7 95 94.7
RcHm_v2.0_Chr2g0124151 Rosa chinensis HOM05D002414 ORTHO05D002531 7.7e-37 157.1 95 82.1
Aqoxy1G01406 Aquilegia oxysepala HOM05D002414 ORTHO05D002531 2.6e-24 115.5 95 54.7
Actinidia16512 Actinidia chinensis HOM05D002414 ORTHO05D002531 3.3e-24 115.2 93 55.9
Rhsim09G0013600 Rhododendron simsii HOM05D002414 ORTHO05D002531 7.0e-22 107.5 95 53.7
PSO675G7771 Papaver somniferum HOM05D002414 ORTHO05D002531 9.1e-22 107.1 95 52.6
TAR627G0445 Trochodendron aralioides HOM05D002414 ORTHO05D002531 2.6e-21 105.5 95 51.6
Prupe.4G282700 Prunus persica HOM05D002414 ORTHO05D002531 4.5e-21 104.8 77 68.8
CSS0046973 Camellia sinensis var. sinensis HOM05D002414 ORTHO05D002531 5.9e-21 104.4 95 53.7
vmacro00656 Vaccinium macrocarpon HOM05D002414 ORTHO05D002531 7.7e-21 104.0 88 54.5
Dinv04255 Davidia involucrata HOM05D002414 ORTHO05D002531 1.0e-20 103.6 95 51.6
Cpa.g.sc37.55 Carica papaya HOM05D002414 ORTHO05D002531 1.7e-20 102.8 95 52.6
Nn7g38299 Nelumbo nucifera HOM05D002414 ORTHO05D002531 2.9e-20 102.1 93 51.6
arahy.Tifrunner.gnm1.ann1.73T74K Arachis hypogaea HOM05D002414 ORTHO05D002531 3.8e-20 101.7 95 51.6
arahy.Tifrunner.gnm1.ann1.CIGQ09 Arachis hypogaea HOM05D002414 ORTHO05D002531 3.8e-20 101.7 95 51.6
CiPaw.04G179700 Carya illinoinensis HOM05D002414 ORTHO05D002531 3.8e-20 101.7 95 53.7
PGR102G2824 Punica granatum HOM05D002414 ORTHO05D002531 5.0e-20 101.3 95 54.7
PSO541G2586 Papaver somniferum HOM05D002414 ORTHO05D002531 6.5e-20 100.9 95 50.5
COL.COLO4_12125 Corchorus olitorius HOM05D002414 ORTHO05D002531 1.9e-19 99.4 95 51.6
Eucgr.H05073 Eucalyptus grandis HOM05D002414 ORTHO05D002531 2.5e-19 99.0 95 49.5
Ca_17007_v3 Cicer arietinum L. HOM05D002414 ORTHO05D002531 9.4e-19 97.1 95 53.7
Lalb_Chr11g0068761 Lupinus albus HOM05D002414 ORTHO05D002531 9.4e-19 97.1 91 50.5
TWI79G0342 Tripterygium wilfordii HOM05D002414 ORTHO05D002531 9.4e-19 97.1 95 49.5
ECA240G4282 Erigeron canadensis HOM05D002414 ORTHO05D002531 1.6e-18 96.3 95 48.4
DCAR_007700 Daucus carota HOM05D002414 ORTHO05D002531 2.1e-18 95.9 85 57.6
GSVIVG01022387001 Vitis vinifera HOM05D002414 ORTHO05D002531 3.6e-18 95.1 95 50.5
Migut.B01009 Erythranthe guttata HOM05D002414 ORTHO05D002531 6.1e-18 94.4 108 46.3
Nitab4.5_0004601g0020 Nicotiana tabacum HOM05D002414 ORTHO05D002531 1.4e-17 93.2 90 46.7
Lj1g0003619 Lotus japonicus HOM05D002414 ORTHO05D002531 1.8e-17 92.8 92 53.3
Nitab4.5_0004974g0050 Nicotiana tabacum HOM05D002414 ORTHO05D002531 2.3e-17 92.4 90 46.7
Cc07_g19220 Coffea canephora HOM05D002414 ORTHO05D002531 4.0e-17 91.7 95 46.3
Sopen11g020390 Solanum pennellii HOM05D002414 ORTHO05D002531 5.2e-17 91.3 95 49.5
CAN.G500.19 Capsicum annuum HOM05D002414 ORTHO05D002531 6.7e-17 90.9 90 45.6
SalBow7G3093 Salvia bowleyana HOM05D002414 ORTHO05D002531 8.8e-17 90.5 89 51.7
Psat5g058280 Pisum sativum HOM05D002414 ORTHO05D002531 1.2e-16 90.1 95 49.5
Glyma.06G158600 Glycine max HOM05D002414 ORTHO05D002531 2.0e-16 89.4 92 50.0
Solyc11g044900.2 Solanum lycopersicum HOM05D002414 ORTHO05D002531 2.6e-16 89.0 95 49.5
Medtr3g097090 Medicago truncatula HOM05D002414 ORTHO05D002531 3.3e-16 88.6 84 56.0
CAN.G875.5 Capsicum annuum HOM05D002414 ORTHO05D002531 4.4e-16 88.2 90 44.4
Aa31LG4G14980 Aethionema arabicum HOM05D002414 ORTHO05D002531 7.5e-16 87.4 85 47.1
HanXRQChr03g0068381 Helianthus annuus HOM05D002414 ORTHO05D002531 7.5e-16 87.4 88 45.5
Lsat_1_v5_gn_7_55620 Lactuca sativa HOM05D002414 ORTHO05D002531 9.7e-16 87.0 95 45.3
Oeu008806.1 Olea europaea HOM05D002414 ORTHO05D002531 9.7e-16 87.0 85 52.9
MBI18_g30038_MAGBIO Magnolia biondii HOM05D002414 ORTHO05D002531 1.3e-15 86.7 95 44.2
Nitab4.5_0002762g0020 Nicotiana tabacum HOM05D002414 ORTHO05D002531 2.2e-15 85.9 95 48.4
MBI18_g05078_MAGBIO Magnolia biondii HOM05D002414 ORTHO05D002531 2.8e-15 85.5 95 44.2
MBI18_g39154_MAGBIO Magnolia biondii HOM05D002414 ORTHO05D002531 4.8e-15 84.7 85 45.9
Peaxi162Scf00126g00240 Petunia axillaris HOM05D002414 ORTHO05D002531 4.8e-15 84.7 85 50.6
SGA_v2.0_scaffold4G01944 Striga asiatica HOM05D002414 ORTHO05D002531 4.8e-15 84.7 92 48.9
Ah.16g104700 Amaranthus hybridus HOM05D002414 ORTHO05D002531 8.2e-15 84.0 89 44.9
Oeu033678.1 Olea europaea HOM05D002414 ORTHO05D002531 8.2e-15 84.0 85 50.6
MBI18_g45457_MAGBIO Magnolia biondii HOM05D002414 ORTHO05D002531 1.1e-14 83.6 91 44.0
Nitab4.5_0000878g0020 Nicotiana tabacum HOM05D002414 ORTHO05D002531 1.1e-14 83.6 95 47.4
TPR.G7854 Trifolium pratense HOM05D002414 ORTHO05D002531 1.8e-14 82.8 84 52.4
unitig_736.g22772 Utricularia gibba HOM05D002414 ORTHO05D002531 5.3e-14 81.3 87 48.3
Zm00001eb175960 Zea mays HOM05D002414 ORTHO05D002531 5.3e-14 81.3 93 37.6
Lj1g0021263 Lotus japonicus HOM05D002414 ORTHO05D002531 7.0e-14 80.9 83 51.8
Oeu042313.1 Olea europaea HOM05D002414 ORTHO05D002531 1.2e-13 80.1 85 47.1
AUR62012428 Chenopodium quinoa HOM05D002414 ORTHO05D002531 1.6e-13 79.7 88 48.9
Os08g0559900 Oryza sativa ssp. japonica HOM05D002414 ORTHO05D002531 1.6e-13 79.7 92 44.6
EL10Ac2g04183 Beta vulgaris HOM05D002414 ORTHO05D002531 3.5e-13 78.6 76 50.0
MBI18_g07837_MAGBIO Magnolia biondii HOM05D002414 ORTHO05D002531 1.3e-12 76.6 75 45.3
Carub.0005s1161 Capsella rubella HOM05D002414 ORTHO05D002531 2.9e-12 75.5 91 42.9
AUR62031551 Chenopodium quinoa HOM05D002414 ORTHO05D002531 3.8e-12 75.1 88 46.6
AT3G45750 Arabidopsis thaliana HOM05D002414 ORTHO05D002531 6.5e-12 74.3 77 45.5
HanXRQChr03g0068371 Helianthus annuus HOM05D002414 ORTHO05D002531 6.5e-12 74.3 91 42.9
CARHR149910 Cardamine hirsuta HOM05D002414 ORTHO05D002531 8.5e-12 73.9 90 43.3
Thhalv10002762m.g Eutrema salsugineum HOM05D002414 ORTHO05D002531 8.5e-12 73.9 86 44.2
Sp5g15760 Schrenkiella parvula HOM05D002414 ORTHO05D002531 1.5e-11 73.2 86 43.0
Thecc.01G143400 Theobroma cacao HOM05D002414 ORTHO05D002531 1.5e-11 73.2 90 42.2
Carub.0005s1162 Capsella rubella HOM05D002414 ORTHO05D002531 2.5e-11 72.4 88 40.9
AL5G24390 Arabidopsis lyrata HOM05D002414 ORTHO05D002531 7.2e-11 70.9 77 44.2
BcaB01g01070 Brassica carinata HOM05D002414 ORTHO05D002531 4.7e-10 68.2 86 39.5
BraA06t25214Z Brassica rapa HOM05D002414 ORTHO05D002531 4.7e-10 68.2 86 39.5
BcaC01g01955 Brassica carinata HOM05D002414 ORTHO05D002531 6.1e-10 67.8 86 39.5
BolC3t19274H Brassica oleracea HOM05D002414 ORTHO05D002531 6.1e-10 67.8 86 39.5
Carub.0005s1160 Capsella rubella HOM05D002414 ORTHO05D002531 6.1e-10 67.8 77 40.3
CDE05G0422 Ceratophyllum demersum HOM05D002414 ORTHO05D002531 1.8e-09 66.2 76 42.1
A06p21260 Brassica napus HOM05D002414 ORTHO05D002531 2.3e-09 65.9 86 38.4
AT3G45760 Arabidopsis thaliana HOM05D002414 ORTHO05D002531 1.5e-08 63.2 76 39.5
Oeu036483.1 Olea europaea HOM05D002414 ORTHO05D002531 1.5e-08 63.2 80 42.5
Peaxi162Scf00047g00842 Petunia axillaris HOM05D002414 ORTHO05D002531 2.0e-08 62.8 84 36.9
AL5G24430 Arabidopsis lyrata HOM05D002414 ORTHO05D002531 4.4e-08 61.6 75 41.3
ATR0763G181 Amborella trichopoda HOM05D002414 ORTHO05D002531 1.3e-07 60.1 93 37.6
Sopen09g034750 Solanum pennellii HOM05D002414 ORTHO05D002531 6.3e-07 57.8 84 35.7
PGSC0003DMG400029638 Solanum tuberosum HOM05D002414 ORTHO05D002531 6.3e-07 57.8 84 35.7
Solyc09g091860.4 Solanum lycopersicum HOM05D002414 ORTHO05D002531 1.4e-06 56.6 84 35.7
C03p70190 Brassica napus HOM05D002414 ORTHO05D002531 2.4e-06 55.8 114 28.9


User provided reference genes

Program Settings