Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 0.0e+00 1211.8 587 100.0
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-245 852.8 416 98.8
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-239 831.6 423 95.7
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-238 829.7 416 96.6
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-238 828.6 424 95.5
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-234 815.5 490 84.5
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 3.8e-228 795.0 382 98.7
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-168 596.3 429 70.6
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-166 590.1 431 69.4
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.1e-164 582.0 423 72.3
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-162 577.0 427 70.7
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-162 577.0 425 71.8
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 2.0e-160 570.1 435 66.0
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 1.1e-155 554.3 436 65.1
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.4e-151 538.5 462 63.9
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.4e-151 538.5 462 63.9
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 5.6e-147 525.4 395 67.3
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-137 494.6 389 68.1
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-137 492.3 387 68.0
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.6e-136 488.4 387 67.4
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-134 484.2 342 69.6
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-133 479.6 336 70.2
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 9.0e-121 438.3 397 56.4
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-120 437.2 397 56.9
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-119 434.5 397 56.7
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.6e-117 426.0 407 55.0
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 7.4e-115 418.7 384 56.2
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 5.5e-110 402.5 419 51.1
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 3.3e-107 393.3 413 50.8
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-103 379.8 390 52.1
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.2e-102 375.6 418 50.5
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-100 371.3 390 49.2
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-97 361.3 388 49.2
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-96 357.1 382 48.2
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.2e-94 349.0 364 51.6
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-90 337.0 384 48.2
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.0e-79 299.7 397 44.1
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-76 292.0 353 45.9
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.8e-76 291.2 407 43.7
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 7.0e-73 279.3 219 60.3
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 8.6e-71 272.3 256 54.3
FAN19G2861 Fragaria x ananassa HOM05D006732 ORTHO05D046085 5.6e-70 269.6 130 100.0
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 2.6e-67 260.8 375 42.4
FvH4_1g04910 Fragaria vesca HOM05D006732 ORTHO05D046085 5.7e-67 259.6 126 99.2
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.3e-66 255.8 429 39.4
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-63 248.4 164 72.6
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-60 238.8 342 40.4
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 5.2e-60 236.5 432 37.0
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-54 216.9 387 40.3
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-52 211.5 412 39.1
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 5.2e-52 209.9 405 39.0
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.2e-52 209.9 172 55.2
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-51 208.8 406 40.4
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-51 208.4 189 51.9
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.5e-51 206.1 410 38.8
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 3.7e-50 203.8 425 35.8
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-49 200.7 164 54.9
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.6e-46 189.9 344 37.5
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 2.1e-45 188.0 164 56.1
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-44 185.7 222 49.1
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.9e-43 179.1 384 35.9
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.9e-42 176.8 204 48.0
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-41 173.7 359 36.2
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-39 168.7 304 41.4
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-39 168.7 388 33.2
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 9.6e-38 162.5 139 55.4
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-37 162.2 264 36.4
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 1.6e-37 161.8 404 31.2
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 4.7e-37 160.2 383 36.6
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-36 157.9 398 31.7
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-34 150.6 359 33.1
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 5.1e-31 140.2 104 59.6
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-27 128.3 169 42.6
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-26 125.2 147 44.2
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-26 124.8 108 58.3
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 4.9e-26 123.6 415 26.3
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 4.9e-26 123.6 415 26.3
FvH4_6g52510 Fragaria vesca HOM05D013417 ORTHO05D022618 1.4e-25 122.1 323 32.8
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-25 121.7 77 72.7
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-24 116.3 180 45.0
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 1.8e-23 115.2 288 32.3
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 3.0e-23 114.4 419 26.7
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 5.1e-23 113.6 269 34.6
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 5.6e-22 110.2 389 27.8
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 5.6e-22 110.2 201 41.3
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 1.3e-21 109.0 302 29.5
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 1.3e-21 109.0 444 30.4
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 4.8e-21 107.1 388 28.1
RcHm_v2.0_Chr1g0337091 Rosa chinensis HOM05D010677 ORTHO05D012678 1.4e-20 105.5 212 34.9
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-20 105.1 93 50.5
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-20 104.8 178 34.3
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 4.0e-20 104.0 289 29.4
FAN14G4282 Fragaria x ananassa HOM05D013417 ORTHO05D022618 5.3e-20 103.6 324 29.3
FvH4_2g38420 Fragaria vesca HOM05D013417 ORTHO05D022618 6.9e-20 103.2 326 31.6
FvH4_4g12220 Fragaria vesca HOM05D013417 ORTHO05D022618 9.0e-20 102.8 317 30.9
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 9.0e-20 102.8 431 27.4
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 9.0e-20 102.8 296 28.4
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 1.5e-19 102.1 357 31.7
FvH4_5g34640 Fragaria vesca HOM05D008398 ORTHO05D005682 2.6e-19 101.3 354 30.8
FAN12G2017 Fragaria x ananassa HOM05D013417 ORTHO05D022618 3.4e-19 100.9 308 30.8
RcHm_v2.0_Chr1g0337131 Rosa chinensis HOM05D006732 ORTHO05D012678 3.4e-19 100.9 205 33.7
FAN18G2036 Fragaria x ananassa HOM05D013417 ORTHO05D005682 4.5e-19 100.5 285 31.9
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 7.6e-19 99.8 243 34.2
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.6e-19 99.8 138 40.6
FAN15G3012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.7e-18 98.6 291 30.9
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-18 98.6 202 36.1
FAN01G2543 Fragaria x ananassa HOM05D008398 ORTHO05D046348 2.9e-18 97.8 323 30.0
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 3.8e-18 97.4 243 33.7
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 3.8e-18 97.4 217 33.2
FvH4_7g30470 Fragaria vesca HOM05D008398 ORTHO05D046348 1.4e-17 95.5 329 29.2
FAN23G1145 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-17 95.1 65 66.2
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-17 94.7 71 56.3
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 3.2e-17 94.4 192 36.5
FAN19G2055 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-17 94.4 81 56.8
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-17 94.4 117 45.3
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 9.3e-17 92.8 328 29.3
FAN12G2010 Fragaria x ananassa HOM05D013417 ORTHO05D022618 9.3e-17 92.8 307 30.0
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.3e-17 92.8 120 40.8
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.3e-17 92.8 120 40.8
FvH4_7g31260 Fragaria vesca HOM05D010677 ORTHO05D012678 1.2e-16 92.4 287 28.2
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 1.6e-16 92.0 175 34.3
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 2.1e-16 91.7 270 31.5
FvH4_7g16534 Fragaria vesca HOM05D008398 ORTHO05D046322 2.7e-16 91.3 332 31.0
FAN06G1115 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.7e-16 91.3 287 27.5
FAN06G1601 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.7e-16 91.3 287 27.5
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 2.7e-16 91.3 301 29.2
FAN10G1111 Fragaria x ananassa HOM05D000122 ORTHO05D000139 3.9e-15 87.4 274 27.4
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 6.7e-15 86.7 427 25.3
FAN06G5012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 6.7e-15 86.7 434 26.0
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.1e-14 85.9 438 25.3
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-14 85.5 150 43.3
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 1.5e-14 85.5 302 25.5
FAN10G3231 Fragaria x ananassa HOM05D000122 ORTHO05D000139 3.3e-14 84.3 265 27.5
FAN06G3455 Fragaria x ananassa HOM05D010677 ORTHO05D012678 5.6e-14 83.6 436 26.6
FAN03G0822 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.3e-13 82.4 167 31.7
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.3e-13 82.4 279 30.8
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 1.3e-13 82.4 199 36.7
FvH4_5g09162 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-13 81.6 110 45.5
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.4e-12 79.0 304 27.0
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-12 79.0 103 39.8
FAN19G0291 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-12 79.0 163 35.0
FAN06G2795 Fragaria x ananassa HOM05D008398 ORTHO05D046322 1.8e-12 78.6 337 28.5
FAN10G3802 Fragaria x ananassa HOM05D008398 ORTHO05D035411 1.8e-12 78.6 198 30.8
QL02p081954 Quercus lobata HOM05D006732 ORTHO05D005682 5.3e-12 77.0 360 25.8
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 9.0e-12 76.3 221 29.9
FvH4_1g04520 Fragaria vesca HOM05D006732 ORTHO05D005682 9.0e-12 76.3 82 45.1
FAN03G1797 Fragaria x ananassa HOM05D008398 ORTHO05D029520 3.4e-11 74.3 256 28.9
FAN03G3131 Fragaria x ananassa HOM05D008398 ORTHO05D029520 3.4e-11 74.3 256 28.9
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 3.8e-10 70.9 272 27.2
RcHm_v2.0_Chr5g0014821 Rosa chinensis HOM05D006732 ORTHO05D005682 8.4e-10 69.7 333 26.4
FAN01G1167 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.9e-09 68.6 299 23.7
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-09 67.8 50 60.0
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 7.1e-09 66.6 167 31.7
COL.COLO4_29430 Corchorus olitorius HOM05D035412 ORTHO05D019051 1.2e-08 65.9 267 25.1
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-08 64.7 55 49.1
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 7.9e-08 63.2 133 32.3
FvH4_4g06201 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-07 62.8 106 43.4
FvH4_4g00460 Fragaria vesca HOM05D031586 ORTHO05D045486 1.3e-07 62.4 266 28.9
Prupe.6G083000 Prunus persica HOM05D006765 ORTHO05D005682 1.3e-07 62.4 216 29.2
FAN22G0443 Fragaria x ananassa HOM05D013417 ORTHO05D005682 1.8e-07 62.0 223 26.9
Rhsim02G0133500 Rhododendron simsii HOM05D019272 ORTHO05D020252 3.9e-07 60.8 151 31.8
FvH4_7g28941 Fragaria vesca HOM05D006732 ORTHO05D005682 6.7e-07 60.1 136 34.6
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 8.7e-07 59.7 208 28.8
FvH4_7g31310 Fragaria vesca HOM05D000122 ORTHO05D012678 8.7e-07 59.7 118 31.4
FvH4_1g03720 Fragaria vesca HOM05D006732 ORTHO05D035266 4.3e-06 57.4 135 35.6


User provided reference genes

Program Settings