Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.4e-70 266.9 137 100.0
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 1.3e-67 259.6 137 97.8
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.1e-65 250.4 137 94.2
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.0e-59 233.4 137 89.1
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 3.3e-50 201.8 137 77.4
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.3e-30 136.7 68 98.5
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 8.5e-30 134.0 134 56.7
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 6.1e-28 127.9 132 57.6
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 1.8e-27 126.3 126 55.6
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 1.8e-27 126.3 130 53.8
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 3.9e-27 125.2 132 53.0
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 2.0e-26 122.9 139 56.8
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.0e-26 122.9 139 56.8
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 4.4e-26 121.7 132 55.3
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 7.4e-26 120.9 131 56.5
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 9.7e-26 120.6 132 53.0
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 2.8e-25 119.0 135 55.6
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.1e-24 117.1 132 53.0
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 1.1e-24 117.1 132 53.8
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 1.1e-24 117.1 130 55.4
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 1.4e-24 116.7 132 53.8
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 5.3e-24 114.8 131 51.9
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 2.6e-23 112.5 130 49.2
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 5.9e-23 111.3 132 51.5
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 1.0e-22 110.5 126 50.8
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 1.7e-22 109.8 134 52.2
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 3.8e-22 108.6 132 50.8
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 5.0e-22 108.2 133 49.6
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 6.5e-22 107.8 121 52.9
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 1.5e-21 106.7 132 50.0
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.5e-21 105.9 129 51.2
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 3.2e-21 105.5 129 46.5
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 3.2e-21 105.5 114 51.8
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 4.2e-21 105.1 135 47.4
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 5.5e-21 104.8 141 47.5
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 5.5e-21 104.8 78 64.1
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 7.2e-21 104.4 134 47.0
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 9.4e-21 104.0 133 45.9
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 1.2e-20 103.6 133 45.1
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.2e-20 103.6 93 60.2
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 1.2e-20 103.6 71 69.0
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 1.6e-20 103.2 133 42.1
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 1.6e-20 103.2 132 50.8
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 2.7e-20 102.4 131 48.1
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 6.1e-20 101.3 130 47.7
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 6.1e-20 101.3 132 46.2
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 6.1e-20 101.3 110 54.5
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 6.1e-20 101.3 132 50.0
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 6.1e-20 101.3 75 66.7
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 8.0e-20 100.9 131 47.3
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 1.0e-19 100.5 132 45.5
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 1.4e-19 100.1 98 57.1
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 2.3e-19 99.4 141 46.8
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 3.0e-19 99.0 136 47.1
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 4.0e-19 98.6 132 49.2
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 8.8e-19 97.4 129 44.2
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 1.2e-18 97.1 131 48.9
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 1.2e-18 97.1 131 48.9
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.2e-18 97.1 136 46.3
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 1.5e-18 96.7 130 45.4
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 2.0e-18 96.3 132 47.0
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 2.0e-18 96.3 145 44.8
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 2.6e-18 95.9 131 48.1
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 2.6e-18 95.9 147 43.5
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 3.4e-18 95.5 137 44.5
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 4.4e-18 95.1 131 45.0
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.8e-17 92.4 130 47.7
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 3.7e-17 92.0 91 53.8
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 4.8e-17 91.7 131 45.8
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 6.3e-17 91.3 69 65.2
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.3e-17 90.9 98 55.1
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 1.1e-16 90.5 130 47.7
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 1.1e-16 90.5 65 69.2
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 1.1e-16 90.5 130 47.7
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 1.4e-16 90.1 63 69.8
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 2.4e-16 89.4 130 43.8
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 3.1e-16 89.0 125 48.0
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 3.1e-16 89.0 130 43.8
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 5.3e-16 88.2 68 67.6
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.3e-16 88.2 69 66.7
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 1.2e-15 87.0 133 42.9
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 2.0e-15 86.3 92 53.3
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 2.0e-15 86.3 92 53.3
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 1.0e-14 84.0 132 39.4
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 1.0e-14 84.0 136 41.9
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 1.0e-14 84.0 96 50.0
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.3e-14 83.6 133 46.6
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 2.9e-14 82.4 134 44.8
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 2.9e-14 82.4 115 45.2
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 5.0e-14 81.6 72 55.6
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 1.9e-13 79.7 112 41.1
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 2.5e-13 79.3 135 41.5
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 5.5e-13 78.2 112 44.6
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 5.5e-13 78.2 71 57.7
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 7.2e-13 77.8 146 43.2
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 9.4e-13 77.4 166 36.7
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 9.4e-13 77.4 141 39.7
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 1.4e-11 73.6 130 41.5
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 2.3e-11 72.8 132 38.6
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 2.3e-11 72.8 99 42.4
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 3.0e-11 72.4 133 39.8
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 5.2e-11 71.6 106 48.1
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 6.8e-11 71.2 87 46.0
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 8.8e-11 70.9 131 41.2
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.5e-10 70.1 133 39.1
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 2.0e-10 69.7 139 40.3
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 2.0e-10 69.7 97 46.4
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 3.4e-10 68.9 106 47.2
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 4.4e-10 68.6 123 41.5
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 9.8e-10 67.4 50 60.0
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 1.3e-09 67.0 119 41.2
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.7e-09 66.6 123 42.3
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 4.8e-09 65.1 119 37.8
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 4.8e-09 65.1 112 37.5
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 1.8e-08 63.2 127 32.3
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 3.1e-08 62.4 65 52.3
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 1.2e-07 60.5 118 40.7
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 1.6e-07 60.1 68 48.5
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 2.0e-07 59.7 108 39.8
PGR044G2447 Punica granatum HOM05D006100 ORTHO05D007539 7.7e-07 57.8 38 68.4
Lsat_1_v5_gn_3_76280 Lactuca sativa HOM05D006100 ORTHO05D007539 3.8e-06 55.5 136 27.9


User provided reference genes

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