Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 3.7e-42 174.5 90 100.0
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.7e-42 174.5 90 100.0
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.9e-41 172.2 90 96.7
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.2e-40 169.5 90 96.7
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 4.6e-40 167.5 90 93.3
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 1.6e-37 159.1 93 88.2
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 1.5e-27 125.9 100 68.0
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 1.4e-25 119.4 105 64.8
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 2.4e-25 118.6 96 63.5
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 5.1e-23 110.9 91 67.0
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 1.1e-22 109.8 97 66.0
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.1e-22 109.8 96 61.5
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 2.8e-21 105.1 96 60.4
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 3.6e-21 104.8 98 57.1
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 4.7e-21 104.4 94 60.6
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 1.8e-20 102.4 93 58.1
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 4.0e-20 101.3 98 57.1
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 1.5e-19 99.4 94 59.6
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 2.6e-19 98.6 97 58.8
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 2.6e-19 98.6 97 54.6
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 3.4e-19 98.2 96 58.3
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 4.4e-19 97.8 99 57.6
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 9.9e-19 96.7 97 51.5
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 2.9e-18 95.1 95 52.6
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 3.2e-17 91.7 90 53.3
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 9.2e-17 90.1 101 50.5
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.2e-16 89.7 102 50.0
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 1.2e-16 89.7 94 51.1
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 4.6e-16 87.8 97 52.6
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 6.0e-16 87.4 98 50.0
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 6.0e-16 87.4 94 55.3
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 7.8e-16 87.0 96 51.0
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.8e-16 87.0 99 52.5
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.3e-15 86.3 98 50.0
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.3e-15 86.3 98 50.0
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 1.3e-15 86.3 95 51.6
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.7e-15 85.9 95 49.5
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 3.0e-15 85.1 88 56.8
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 8.7e-15 83.6 93 54.8
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 1.1e-14 83.2 88 52.3
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 1.5e-14 82.8 93 49.5
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 1.9e-14 82.4 84 56.0
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 4.3e-14 81.3 93 48.4
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 4.3e-14 81.3 94 52.1
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 7.3e-14 80.5 93 49.5
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 9.6e-14 80.1 93 51.6
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 9.6e-14 80.1 93 51.6
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.2e-13 79.7 107 48.6
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 1.2e-13 79.7 93 48.4
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 1.6e-13 79.3 93 46.2
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.8e-13 78.6 107 48.6
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 3.6e-13 78.2 93 53.8
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 3.6e-13 78.2 95 45.3
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 6.2e-13 77.4 93 49.5
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 6.2e-13 77.4 104 49.0
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 6.2e-13 77.4 89 49.4
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 1.4e-12 76.3 93 51.6
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 1.8e-12 75.9 107 45.8
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 4.0e-12 74.7 93 47.3
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 2.6e-11 72.0 95 46.3
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 3.4e-11 71.6 92 44.6
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 4.4e-11 71.2 90 44.4
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 5.8e-11 70.9 92 45.7
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 1.3e-10 69.7 95 42.1
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.8e-10 68.2 98 44.9
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 6.4e-10 67.4 121 42.1
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 4.2e-09 64.7 93 44.1
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 5.4e-09 64.3 60 58.3
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 1.2e-08 63.2 68 51.5
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 1.2e-08 63.2 96 40.6
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 3.5e-08 61.6 87 40.2
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 7.8e-08 60.5 48 64.6
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 1.1e-06 56.6 66 48.5
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 7.3e-06 53.9 67 44.8


User provided reference genes

Program Settings