Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 0.0e+00 1255.7 657 100.0
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 0.0e+00 1198.7 657 96.7
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 0.0e+00 1167.5 657 93.6
FAN23G1889 Fragaria x ananassa HOM05D006730 ORTHO05D008189 1.6e-206 723.4 494 81.6
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 4.9e-200 701.8 697 61.8
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 9.0e-194 681.0 658 57.6
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 1.9e-175 620.2 665 55.6
FAN28G2072 Fragaria x ananassa HOM05D006730 ORTHO05D008189 1.7e-160 570.5 336 88.7
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 4.0e-133 479.6 724 43.0
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 7.5e-132 475.3 717 43.1
FAN28G2984 Fragaria x ananassa HOM05D006730 ORTHO05D008189 1.3e-131 474.6 304 86.5
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.3e-120 438.0 655 41.7
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 4.2e-119 433.0 654 40.7
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 1.2e-118 431.4 681 41.4
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 2.6e-116 423.7 655 41.1
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 9.8e-116 421.8 655 40.9
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 5.4e-114 416.0 652 38.8
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 5.2e-109 399.4 631 38.5
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 8.9e-109 398.7 705 38.9
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 9.8e-108 395.2 678 40.4
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 4.9e-107 392.9 625 42.9
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 1.4e-106 391.3 673 39.1
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 2.7e-105 387.1 656 39.3
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 2.3e-104 384.0 687 38.4
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 2.3e-104 384.0 653 39.7
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 8.6e-104 382.1 655 38.9
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 1.1e-103 381.7 709 38.4
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 1.5e-103 381.3 673 40.1
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 1.5e-103 381.3 663 39.1
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 1.9e-103 380.9 653 39.5
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 7.3e-103 379.0 675 38.7
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 7.3e-103 379.0 678 38.3
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 9.5e-103 378.6 664 39.0
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 1.6e-102 377.9 679 36.8
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 2.8e-102 377.1 727 36.0
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 2.3e-101 374.0 670 38.8
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 3.1e-101 373.6 708 37.9
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 4.4e-100 369.8 682 37.4
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 5.8e-100 369.4 688 36.3
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 2.9e-99 367.1 652 41.3
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 3.7e-99 366.7 656 38.4
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 1.1e-98 365.2 699 35.5
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 4.1e-98 363.2 660 38.3
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 2.5e-95 354.0 697 39.2
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 2.5e-95 354.0 697 39.2
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 5.6e-95 352.8 686 37.3
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 5.6e-95 352.8 719 34.6
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 2.8e-94 350.5 662 36.4
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 1.1e-93 348.6 685 37.7
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 1.8e-93 347.8 686 37.6
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 8.9e-93 345.5 689 37.2
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 2.6e-92 344.0 662 36.3
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 3.4e-92 343.6 696 37.6
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 9.9e-92 342.0 675 35.3
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 1.3e-91 341.7 662 36.4
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 1.3e-91 341.7 644 37.9
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 4.9e-91 339.7 688 37.6
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 3.2e-90 337.0 679 36.2
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 5.4e-90 336.3 664 35.8
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 2.7e-89 334.0 672 35.9
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 1.0e-88 332.0 669 35.7
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 9.5e-87 325.5 668 35.5
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 1.6e-86 324.7 694 34.7
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 8.1e-86 322.4 668 34.9
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 2.4e-85 320.9 680 35.4
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 6.8e-85 319.3 690 35.7
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 1.7e-83 314.7 677 36.2
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 2.4e-82 310.8 586 36.7
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 3.5e-81 307.0 418 45.5
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 2.3e-80 304.3 607 35.9
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 3.6e-78 297.0 647 35.2
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 1.8e-77 294.7 708 33.6
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 4.0e-77 293.5 675 32.0
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 6.9e-77 292.7 707 32.8
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 9.0e-77 292.4 477 40.3
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 8.4e-75 285.8 611 35.0
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 1.4e-74 285.0 633 33.5
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 1.9e-74 284.6 645 33.2
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 1.6e-73 281.6 535 37.4
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 8.7e-72 275.8 656 32.5
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 1.1e-69 268.9 700 31.6
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 2.4e-69 267.7 532 39.1
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 4.0e-69 266.9 601 32.8
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 5.3e-69 266.5 733 30.4
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 5.3e-69 266.5 717 29.4
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 9.0e-69 265.8 532 39.1
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 9.0e-69 265.8 590 33.6
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 2.0e-68 264.6 665 31.3
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 1.3e-67 261.9 657 30.6
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 1.1e-66 258.8 659 31.6
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 2.1e-65 254.6 637 31.4
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 1.8e-64 251.5 705 29.9
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 3.9e-64 250.4 681 30.5
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 1.6e-62 245.0 544 36.2
SGA_v2.0_scaffold36G14479 Striga asiatica HOM05D000061 ORTHO05D008189 2.7e-57 227.6 616 32.3
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 2.3e-56 224.6 420 35.5
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 7.4e-55 219.5 653 28.3
CSS0011413 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 5.3e-53 213.4 287 47.0
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 1.2e-52 212.2 666 27.9
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 1.2e-52 212.2 646 28.8
SHI01154 Sapria himalayana HOM05D006730 ORTHO05D008189 3.1e-45 187.6 533 31.5
DCAR_027052 Daucus carota HOM05D006730 ORTHO05D008189 6.5e-43 179.9 317 37.2
CSS0007333 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 4.8e-38 163.7 297 38.4
PSO017G5839 Papaver somniferum HOM05D006730 ORTHO05D008189 1.4e-32 145.6 422 29.4
Zm00001eb184290 Zea mays HOM05D006730 ORTHO05D008189 3.2e-26 124.4 593 24.5
Ah.10g027080 Amaranthus hybridus HOM05D006730 ORTHO05D008189 5.5e-26 123.6 350 31.7
Os09g0103200 Oryza sativa ssp. japonica HOM05D006730 ORTHO05D008189 4.7e-25 120.6 412 27.4
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 3.9e-24 117.5 401 27.4
PSO063G4508 Papaver somniferum HOM05D006730 ORTHO05D008189 7.7e-20 103.2 331 27.2
HPP92_022486 Vanilla planifolia HOM05D001064 ORTHO05D000885 8.8e-16 89.7 430 23.0
Actinidia26680 Actinidia chinensis HOM05D006730 ORTHO05D008189 1.3e-14 85.9 93 41.9
Ah.10g027090 Amaranthus hybridus HOM05D006730 ORTHO05D008189 3.1e-13 81.3 142 31.7
HanXRQChr12g0385981 Helianthus annuus HOM05D006730 ORTHO05D008189 4.1e-13 80.9 87 47.1
Gohir.A02G010550 Gossypium hirsutum HOM05D006730 ORTHO05D008189 4.5e-12 77.4 93 40.9
Dinv05092 Davidia involucrata HOM05D006730 ORTHO05D008189 2.1e-09 68.6 68 52.9


User provided reference genes

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