Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G2417 Fragaria x ananassa HOM05D008040 ORTHO05D010075 0.0e+00 1097.8 519 100.0
FvH4_1g14071 Fragaria vesca HOM05D008040 ORTHO05D010075 1.0e-309 1065.8 519 96.9
FAN26G0836 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.1e-300 1035.8 519 93.6
FAN23G2403 Fragaria x ananassa HOM05D008040 ORTHO05D010075 2.1e-270 935.3 520 86.9
RcHm_v2.0_Chr2g0102901 Rosa chinensis HOM05D008040 ORTHO05D010075 3.8e-155 552.4 456 63.6
FAN28G1672 Fragaria x ananassa HOM05D008040 ORTHO05D010075 2.0e-148 530.0 265 94.3
RcHm_v2.0_Chr2g0102561 Rosa chinensis HOM05D008040 ORTHO05D010075 6.5e-139 498.4 520 54.0
FAN19G2662 Fragaria x ananassa HOM05D008040 ORTHO05D010075 5.2e-120 435.6 385 61.0
FAN28G2855 Fragaria x ananassa HOM05D008040 ORTHO05D010075 5.2e-112 409.1 227 86.3
FvH4_1g14191 Fragaria vesca HOM05D008040 ORTHO05D010075 8.0e-105 385.2 545 45.5
Prupe.7G151200 Prunus persica HOM05D008040 ORTHO05D010075 3.8e-70 270.0 472 40.0
MD12G1211200 Malus domestica HOM05D008040 ORTHO05D010075 1.7e-67 261.2 525 37.1
MD12G1051600 Malus domestica HOM05D008040 ORTHO05D010075 1.6e-60 238.0 426 37.3
EL10Ac2g04156 Beta vulgaris HOM05D008040 ORTHO05D010075 3.2e-37 160.6 416 31.0
QL04p017640 Quercus lobata HOM05D008040 ORTHO05D010075 1.9e-34 151.4 433 29.3
QL04p017690 Quercus lobata HOM05D008040 ORTHO05D010075 5.7e-34 149.8 432 28.7
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 3.7e-33 147.1 411 28.2
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.4e-32 144.4 417 29.0
AUR62035995 Chenopodium quinoa HOM05D008040 ORTHO05D010075 5.9e-31 139.8 406 28.8
AUR62017713 Chenopodium quinoa HOM05D008040 ORTHO05D010075 7.7e-31 139.4 416 28.1
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 1.2e-28 132.1 460 28.5
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 2.3e-27 127.9 414 28.7
AUR62008579 Chenopodium quinoa HOM05D008040 ORTHO05D010075 2.3e-27 127.9 418 27.8
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 8.8e-27 125.9 414 28.5
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.1e-26 125.6 411 26.8
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 2.0e-26 124.8 309 30.7
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 2.6e-26 124.4 459 28.5
COL.COLO4_31563 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.6e-26 124.4 414 27.3
Potri.013G110300 Populus trichocarpa HOM05D008040 ORTHO05D010075 3.3e-26 124.0 402 28.6
Potri.013G109900 Populus trichocarpa HOM05D008040 ORTHO05D010075 1.3e-25 122.1 411 28.7
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.7e-25 120.6 470 27.7
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.8e-24 118.2 416 27.2
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.8e-24 118.2 438 28.1
MD15G1268400 Malus domestica HOM05D008040 ORTHO05D010075 6.9e-24 116.3 227 37.4
SGA_v2.0_scaffold286G47111 Striga asiatica HOM05D008040 ORTHO05D010075 6.9e-24 116.3 447 26.4
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 1.5e-23 115.2 443 25.3
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 2.6e-23 114.4 411 28.2
Manes.09G072126 Manihot esculenta HOM05D008040 ORTHO05D010075 3.4e-23 114.0 411 25.3
COL.COLO4_31567 Corchorus olitorius HOM05D008040 ORTHO05D010075 7.7e-23 112.8 409 27.1
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.0e-22 112.5 416 29.1
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 2.5e-21 107.8 416 26.9
SGA_v2.0_scaffold286G47115 Striga asiatica HOM05D008040 ORTHO05D010075 7.2e-21 106.3 314 28.3
vmacro17325 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 3.6e-20 104.0 269 31.6
SGA_v2.0_scaffold147G36326 Striga asiatica HOM05D008040 ORTHO05D010075 4.7e-20 103.6 280 28.6
TWI12G0410 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 6.1e-20 103.2 464 24.8
COL.COLO4_10419 Corchorus olitorius HOM05D026534 ORTHO05D010075 2.3e-19 101.3 414 25.4
Ah.07g206250 Amaranthus hybridus HOM05D008040 ORTHO05D010075 1.1e-18 99.0 280 27.9
Ciclev10026974m.g Citrus clementina HOM05D008040 ORTHO05D010075 1.1e-18 99.0 283 27.9
Aqoxy6G00905 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 3.3e-18 97.4 417 25.2
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 2.2e-17 94.7 164 39.0
PSO761G0098 Papaver somniferum HOM05D008040 ORTHO05D010075 1.4e-16 92.0 345 26.7
PSO339G3463 Papaver somniferum HOM05D008040 ORTHO05D010075 7.7e-15 86.3 281 28.1
DCAR_021781 Daucus carota HOM05D008040 ORTHO05D010075 2.2e-14 84.7 234 29.5
Ah.06g196070 Amaranthus hybridus HOM05D008040 ORTHO05D010075 1.5e-13 82.0 272 28.7
Sabra08G0010400 Salix brachista HOM05D008040 ORTHO05D010075 2.5e-13 81.3 231 29.4
Ah.02g122840 Amaranthus hybridus HOM05D008040 ORTHO05D010075 9.4e-13 79.3 251 27.5
vmacro17324 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 2.3e-11 74.7 103 41.7
MBI05_g20724_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 5.2e-11 73.6 317 25.9
Duzib205G1254 Durio zibethinus HOM05D000664 ORTHO05D000491 6.7e-11 73.2 178 31.5
Gohir.D12G199200 Gossypium hirsutum HOM05D000664 ORTHO05D000491 6.7e-11 73.2 205 25.4
Gorai.008G214400 Gossypium raimondii HOM05D000664 ORTHO05D000491 2.6e-10 71.2 205 24.9
Potri.013G109701 Populus trichocarpa HOM05D008040 ORTHO05D010075 2.6e-10 71.2 215 29.3
PSO017G2897 Papaver somniferum HOM05D008040 ORTHO05D010075 3.3e-10 70.9 303 26.4
Potri.008G016300 Populus trichocarpa HOM05D008040 ORTHO05D010075 7.5e-10 69.7 75 49.3
Thecc.03G149500 Theobroma cacao HOM05D000664 ORTHO05D000491 8.2e-09 66.2 205 25.4
Dinv26463 Davidia involucrata HOM05D000664 ORTHO05D000491 1.1e-08 65.9 205 27.3
Medtr3g011190 Medicago truncatula HOM05D011629 ORTHO05D013267 1.1e-08 65.9 323 22.9
Rhsim08G0168000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.1e-08 65.9 296 23.3
SGA_v2.0_scaffold136G35012 Striga asiatica HOM05D000664 ORTHO05D000491 1.4e-08 65.5 210 27.6
Atru.chr1.895 Acer truncatum HOM05D000664 ORTHO05D000491 1.8e-08 65.1 195 23.6
Potri.008G016150 Populus trichocarpa HOM05D008040 ORTHO05D010075 1.8e-08 65.1 74 45.9
Rhsim03G0248800 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.8e-08 65.1 90 41.1
Rhsim03G0249000 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.4e-08 64.7 99 37.4
CSS0031414 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 3.1e-08 64.3 94 41.5
Rhsim01G0013700 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.1e-08 63.9 161 29.8
THA.LOC104801597 Tarenaya hassleriana HOM05D000664 ORTHO05D000491 4.1e-08 63.9 200 26.5
Rhsim01G0016900 Rhododendron simsii HOM05D000664 ORTHO05D000491 7.0e-08 63.2 238 25.6
SGA_v2.0_scaffold136G35030 Striga asiatica HOM05D000664 ORTHO05D000491 7.0e-08 63.2 212 25.9
Ciclev10006867m.g Citrus clementina HOM05D000664 ORTHO05D000491 9.1e-08 62.8 91 39.6
RcHm_v2.0_Chr4g0388051 Rosa chinensis HOM05D000664 ORTHO05D000491 9.1e-08 62.8 111 35.1
Duzib068G1024 Durio zibethinus HOM05D000664 ORTHO05D000491 1.2e-07 62.4 286 21.7
Lj2P385T13 Lonicera japonica HOM05D000664 ORTHO05D000491 1.2e-07 62.4 228 28.1
Nitab4.5_0000032g0090 Nicotiana tabacum HOM05D000664 ORTHO05D000491 1.2e-07 62.4 222 26.1
Cfa020730 Carpinus fangiana HOM05D000664 ORTHO05D000491 1.6e-07 62.0 286 25.5
FAN09G3500 Fragaria x ananassa HOM05D002893 ORTHO05D003387 1.6e-07 62.0 226 28.8
AUR62004782 Chenopodium quinoa HOM05D000664 ORTHO05D000491 2.0e-07 61.6 204 29.4
Migut.J01669 Erythranthe guttata HOM05D000664 ORTHO05D000491 2.7e-07 61.2 367 22.6
RcHm_v2.0_Chr4g0398061 Rosa chinensis HOM05D000664 ORTHO05D000491 2.7e-07 61.2 288 22.9
FAN14G3142 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.5e-07 60.8 226 28.8
QL04p017704 Quercus lobata HOM05D008040 ORTHO05D010075 3.5e-07 60.8 106 34.0
Rhsim01G0017000 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.5e-07 60.8 301 23.6
Psat2g144440 Pisum sativum HOM05D011629 ORTHO05D013267 4.5e-07 60.5 188 26.1
TAR626G1239 Trochodendron aralioides HOM05D000664 ORTHO05D000491 4.5e-07 60.5 162 29.6
Aqoxy3G00584 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 7.7e-07 59.7 171 26.3
Os01g0876300 Oryza sativa ssp. japonica HOM05D000664 ORTHO05D000491 1.0e-06 59.3 151 27.8
Rhsim01G0013600 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.0e-06 59.3 81 39.5
Rhsim01G0013800 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.0e-06 59.3 91 38.5
CSS0037447 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 1.3e-06 58.9 104 34.6
FAN27G2908 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.7e-06 58.5 176 26.7
Rhsim01G0018000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.7e-06 58.5 238 25.2
Rhsim08G0238800 Rhododendron simsii HOM05D001729 ORTHO05D001155 2.2e-06 58.2 228 26.3
RhsimUnG0091900 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.2e-06 58.2 139 34.5
vmacro06138 Vaccinium macrocarpon HOM05D000664 ORTHO05D000491 2.2e-06 58.2 111 36.0
BcaB01g05705 Brassica carinata HOM05D000664 ORTHO05D000491 2.9e-06 57.8 237 25.7
Haze_19047 Corylus avellana HOM05D000664 ORTHO05D000491 2.9e-06 57.8 286 24.8
FvH4_6g53072 Fragaria vesca HOM05D000664 ORTHO05D000491 2.9e-06 57.8 115 38.3
Psat5g225280 Pisum sativum HOM05D011629 ORTHO05D013267 2.9e-06 57.8 143 30.8
PGR044G0383 Punica granatum HOM05D000664 ORTHO05D000491 2.9e-06 57.8 208 30.3
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 2.9e-06 57.8 218 25.2
Thecc.06G054800 Theobroma cacao HOM05D000664 ORTHO05D000491 2.9e-06 57.8 207 23.2
Rhsim07G0025700 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.8e-06 57.4 200 24.5
ECA232G0361 Erigeron canadensis HOM05D005822 ORTHO05D007267 5.0e-06 57.0 282 25.2
Rhsim01G0013900 Rhododendron simsii HOM05D000664 ORTHO05D000491 5.0e-06 57.0 102 36.3
Rhsim08G0219900 Rhododendron simsii HOM05D001729 ORTHO05D001155 6.5e-06 56.6 231 26.4
RcHm_v2.0_Chr4g0398041 Rosa chinensis HOM05D000664 ORTHO05D000491 6.5e-06 56.6 199 24.6
RcHm_v2.0_Chr4g0413281 Rosa chinensis HOM05D000007 ORTHO05D000521 6.5e-06 56.6 194 25.8
FvH4_2g35920 Fragaria vesca HOM05D000664 ORTHO05D000491 8.5e-06 56.2 107 32.7
PSO675G6708 Papaver somniferum HOM05D008326 ORTHO05D001155 8.5e-06 56.2 161 28.0
Sabra01G0178200 Salix brachista HOM05D000664 ORTHO05D000491 8.5e-06 56.2 180 28.3


User provided reference genes

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