Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 0.0e+00 1096.6 578 100.0
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 0.0e+00 1082.8 579 99.1
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.1e-293 1012.7 578 94.1
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.8e-292 1008.1 584 93.3
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 4.6e-234 814.7 581 79.3
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.3e-199 700.3 637 68.0
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 4.1e-158 562.4 625 56.6
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 2.0e-133 480.3 601 53.4
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 4.5e-133 479.2 595 53.3
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 5.8e-104 382.5 661 47.0
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 2.4e-97 360.5 600 44.7
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 1.6e-93 347.8 687 43.1
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 6.9e-73 279.3 601 41.1
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 1.2e-72 278.5 585 38.5
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 3.2e-70 270.4 493 44.8
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 4.6e-69 266.5 569 40.6
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 1.0e-68 265.4 564 41.7
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 2.2e-66 257.7 657 36.5
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 1.1e-65 255.4 550 38.7
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 1.1e-65 255.4 602 38.9
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 6.9e-65 252.7 612 37.4
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 5.9e-64 249.6 623 39.3
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 1.2e-61 241.9 611 35.5
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 1.8e-60 238.0 364 46.2
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 3.0e-60 237.3 637 35.5
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 1.1e-57 228.8 586 37.0
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 1.2e-56 225.3 507 37.1
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 2.0e-56 224.6 623 36.9
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 5.0e-55 219.9 610 38.7
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 1.4e-54 218.4 486 39.5
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 7.2e-54 216.1 598 35.6
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 2.6e-51 207.6 534 36.0
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 6.3e-50 203.0 639 31.9
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 1.4e-49 201.8 344 44.8
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 3.1e-49 200.7 428 37.6
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 5.3e-49 199.9 606 35.8
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 9.1e-49 199.1 543 35.4
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 4.5e-48 196.8 601 35.9
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 5.0e-47 193.4 542 34.9
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 5.0e-47 193.4 542 34.9
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 1.4e-46 191.8 565 34.3
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 1.6e-45 188.3 503 36.0
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 2.7e-45 187.6 528 35.0
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 1.0e-44 185.7 568 34.5
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 2.3e-44 184.5 367 40.6
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 6.7e-44 183.0 600 33.7
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 1.1e-43 182.2 368 39.4
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 4.4e-43 180.3 631 33.1
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 1.7e-42 178.3 532 34.6
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.7e-42 178.3 633 33.3
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.8e-42 177.6 395 38.7
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 6.3e-42 176.4 442 39.8
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 3.5e-40 170.6 549 32.6
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 3.5e-40 170.6 693 30.0
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 4.5e-40 170.2 278 43.5
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 1.0e-39 169.1 504 31.0
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 1.0e-39 169.1 215 49.3
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 1.0e-39 169.1 460 36.1
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 2.9e-39 167.5 409 35.5
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 2.9e-39 167.5 574 36.1
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 6.5e-39 166.4 480 32.3
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 6.5e-39 166.4 597 33.8
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 8.5e-39 166.0 480 34.4
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.6e-37 161.8 539 36.4
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 1.0e-36 159.1 630 34.0
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 1.8e-36 158.3 366 40.4
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 1.8e-36 158.3 612 31.7
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 4.0e-36 157.1 292 38.4
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 4.0e-36 157.1 594 33.8
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.2e-35 155.6 381 37.0
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 1.2e-35 155.6 554 34.5
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 1.2e-35 155.6 631 33.0
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 1.5e-35 155.2 458 31.0
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 2.6e-35 154.5 663 32.4
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 3.7e-34 150.6 446 34.5
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.1e-33 149.1 227 45.4
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 5.3e-33 146.7 615 30.9
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 2.0e-32 144.8 406 34.0
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 2.0e-32 144.8 502 32.9
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 2.7e-32 144.4 613 29.5
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 3.5e-32 144.1 522 31.6
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 1.0e-31 142.5 405 32.8
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 1.0e-31 142.5 540 30.7
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 1.3e-31 142.1 564 28.7
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 2.2e-31 141.4 589 31.1
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 3.8e-31 140.6 262 37.8
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 6.5e-31 139.8 451 31.5
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 6.5e-31 139.8 420 33.3
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 2.5e-30 137.9 405 34.3
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 3.2e-30 137.5 414 33.1
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 4.2e-30 137.1 413 33.2
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 9.4e-30 136.0 264 38.6
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 8.0e-29 132.9 443 30.9
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 1.0e-28 132.5 402 34.8
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 3.0e-28 131.0 570 31.1
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 1.1e-25 122.5 248 41.1
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 2.4e-25 121.3 242 34.7
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 5.9e-24 116.7 405 32.3
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 4.7e-21 107.1 232 37.1
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 2.3e-15 88.2 598 25.8
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 2.1e-13 81.6 270 26.3
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 3.6e-13 80.9 425 28.0
CSS0030010 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 2.9e-10 71.2 278 31.7
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 5.4e-09 67.0 195 32.3
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 3.0e-07 61.2 283 23.7
BcaB05g23323 Brassica carinata HOM05D006718 ORTHO05D008492 6.6e-07 60.1 114 39.5


User provided reference genes

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