Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.7e-112 407.5 197 100.0
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 2.0e-109 399.1 200 97.0
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.2e-82 310.1 157 94.9
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 1.8e-57 226.5 220 53.6
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 9.0e-57 224.2 226 54.9
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 1.2e-53 213.8 200 55.5
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.1e-53 213.0 200 55.5
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.1e-53 213.0 200 55.5
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 3.5e-53 212.2 209 52.6
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.5e-53 212.2 209 52.6
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 7.9e-53 211.1 212 52.4
FAN28G2808 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.1e-52 208.4 132 81.8
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.1e-50 203.0 181 56.9
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 5.8e-48 194.9 203 51.7
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 1.3e-47 193.7 207 49.8
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 9.3e-46 187.6 135 61.5
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 2.7e-45 186.0 157 54.8
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 1.5e-43 180.3 135 60.7
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 8.2e-42 174.5 151 57.0
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 9.0e-41 171.0 127 61.4
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 1.3e-39 167.2 130 58.5
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 5.0e-39 165.2 128 59.4
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 1.2e-37 160.6 127 56.7
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 2.7e-37 159.5 200 44.5
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 3.5e-37 159.1 126 57.1
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 4.6e-37 158.7 139 54.7
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 1.0e-36 157.5 128 58.6
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 2.3e-36 156.4 163 49.7
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.1e-35 154.1 126 56.3
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 1.1e-35 154.1 145 51.7
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.9e-35 153.3 127 55.1
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 1.9e-35 153.3 163 48.5
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 3.7e-34 149.1 125 55.2
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 4.8e-34 148.7 128 53.1
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 1.1e-33 147.5 129 53.5
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.4e-33 146.4 128 53.9
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 6.9e-33 144.8 164 47.0
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 1.5e-32 143.7 132 49.2
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 2.6e-32 142.9 126 50.8
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 2.6e-32 142.9 126 50.8
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 2.9e-31 139.4 126 49.2
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 3.8e-31 139.0 123 51.2
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 2.5e-30 136.3 128 52.3
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 4.2e-30 135.6 128 52.3
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 1.6e-29 133.7 134 47.8
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 6.1e-29 131.7 124 46.8
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 1.0e-28 131.0 172 41.3
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 3.0e-28 129.4 131 46.6
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 6.7e-28 128.3 126 46.0
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 1.1e-27 127.5 125 49.6
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 2.0e-27 126.7 124 50.0
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 5.7e-27 125.2 126 46.8
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 7.4e-27 124.8 126 48.4
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 9.7e-27 124.4 128 46.1
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 2.2e-26 123.2 132 42.4
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 8.2e-26 121.3 135 43.0
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 1.1e-25 120.9 131 46.6
Haze_00185 Corylus avellana HOM05D002733 ORTHO05D003856 1.1e-25 120.9 124 48.4
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 1.1e-25 120.9 124 46.8
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 1.4e-25 120.6 119 45.4
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 3.1e-25 119.4 129 44.2
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 4.1e-25 119.0 109 47.7
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 5.3e-25 118.6 142 47.2
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 5.3e-25 118.6 142 47.2
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 1.2e-24 117.5 142 47.2
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 1.5e-24 117.1 126 44.4
CiPaw.03G015100 Carya illinoinensis HOM05D002733 ORTHO05D003856 4.5e-24 115.5 105 51.4
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 4.5e-24 115.5 174 35.6
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 4.5e-24 115.5 174 35.6
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 5.9e-24 115.2 174 35.6
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 5.9e-24 115.2 174 35.6
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 5.9e-24 115.2 174 35.6
DCAR_003269 Daucus carota HOM05D002733 ORTHO05D003856 7.7e-24 114.8 157 43.9
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 1.3e-23 114.0 130 44.6
Eucgr.C01014 Eucalyptus grandis HOM05D002733 ORTHO05D003856 1.7e-23 113.6 161 37.3
FAN19G0693 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.0e-23 112.1 148 46.6
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 5.0e-23 112.1 126 44.4
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 6.5e-23 111.7 126 44.4
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 8.5e-23 111.3 129 44.2
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 8.5e-23 111.3 126 42.9
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 8.5e-23 111.3 175 33.7
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 1.1e-22 110.9 124 46.0
Haze_00197 Corylus avellana HOM05D002733 ORTHO05D003856 1.1e-22 110.9 121 44.6
Sabra08G0161200 Salix brachista HOM05D002733 ORTHO05D003856 1.9e-22 110.2 105 50.5
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 7.2e-22 108.2 129 40.3
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 1.2e-21 107.5 109 48.6
Prupe.7G224100 Prunus persica HOM05D002733 ORTHO05D003856 1.2e-21 107.5 164 37.8
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 2.1e-21 106.7 136 39.0
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 4.7e-21 105.5 111 47.7
BolC3t15022H Brassica oleracea HOM05D002733 ORTHO05D003856 7.9e-21 104.8 128 43.8
Peaxi162Scf00665g00126 Petunia axillaris HOM05D002733 ORTHO05D003856 1.0e-20 104.4 112 49.1
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 1.0e-20 104.4 126 39.7
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 1.8e-20 103.6 130 38.5
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 3.0e-20 102.8 134 41.8
DCAR_014131 Daucus carota HOM05D002733 ORTHO05D003856 3.0e-20 102.8 175 35.4
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 3.9e-20 102.4 161 39.8
Sp5g18240 Schrenkiella parvula HOM05D002733 ORTHO05D003856 3.9e-20 102.4 163 37.4
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 5.1e-20 102.1 120 42.5
C03p26370 Brassica napus HOM05D002733 ORTHO05D003856 5.1e-20 102.1 128 43.0
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 6.7e-20 101.7 161 39.8
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 6.7e-20 101.7 161 39.8
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 6.7e-20 101.7 161 39.8
BraA03t11459Z Brassica rapa HOM05D002733 ORTHO05D003856 1.1e-19 100.9 128 43.0
A04p30010 Brassica napus HOM05D002733 ORTHO05D003856 1.5e-19 100.5 137 36.5
BraA04t18506Z Brassica rapa HOM05D002733 ORTHO05D003856 1.5e-19 100.5 137 36.5
A03p22270 Brassica napus HOM05D002733 ORTHO05D003856 2.6e-19 99.8 128 43.0
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 3.3e-19 99.4 135 43.0
Dinv41650 Davidia involucrata HOM05D002733 ORTHO05D003856 7.4e-19 98.2 135 44.4
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 7.4e-19 98.2 160 36.2
BcaC02g07356 Brassica carinata HOM05D002733 ORTHO05D003856 9.7e-19 97.8 136 36.0
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 1.3e-18 97.4 136 36.0
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 1.7e-18 97.1 161 39.1
Aqoxy7G01497 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 2.2e-18 96.7 126 42.1
BcaC01g05431 Brassica carinata HOM05D002733 ORTHO05D003856 2.2e-18 96.7 172 32.0
C03p26740 Brassica napus HOM05D002733 ORTHO05D003856 2.8e-18 96.3 190 31.1
BolC3t15059H Brassica oleracea HOM05D002733 ORTHO05D003856 2.8e-18 96.3 190 31.1
Aa31LG8G17220 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.7e-18 95.9 163 31.9
Sed0017653 Sechium edule HOM05D002733 ORTHO05D003856 6.3e-18 95.1 126 38.1
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 1.1e-17 94.4 111 40.5
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 1.1e-17 94.4 113 40.7
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.1e-17 94.4 129 40.3
BcaB02g09048 Brassica carinata HOM05D002733 ORTHO05D003856 1.4e-17 94.0 117 41.9
Peaxi162Scf00665g00148 Petunia axillaris HOM05D002733 ORTHO05D003856 1.8e-17 93.6 186 36.6
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 2.4e-17 93.2 164 32.9
QL01p018935 Quercus lobata HOM05D002733 ORTHO05D003856 7.0e-17 91.7 136 41.2
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 9.1e-17 91.3 118 39.0
QL01p018939 Quercus lobata HOM05D002733 ORTHO05D003856 2.6e-16 89.7 190 34.2
Aa31LG8G17200 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.5e-16 89.4 165 34.5
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.5e-16 89.0 107 38.3
Aa31LG8G17140 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.9e-16 88.6 163 31.9
Aa31LG8G17170 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.9e-16 88.6 160 33.1
AL4G37790 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 5.9e-16 88.6 157 33.1
CARHR135120 Cardamine hirsuta HOM05D002733 ORTHO05D003856 7.7e-16 88.2 137 38.0
TPR.G22027 Trifolium pratense HOM05D002733 ORTHO05D003856 7.7e-16 88.2 94 44.7
Aa31LG8G17160 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.0e-15 87.8 167 31.7
Peaxi162Scf00665g00139 Petunia axillaris HOM05D002733 ORTHO05D003856 1.0e-15 87.8 127 43.3
Dinv07992 Davidia involucrata HOM05D002733 ORTHO05D003856 2.2e-15 86.7 132 44.7
Aa31LG3G6410 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.9e-15 86.3 169 32.0
PSO566G0305 Papaver somniferum HOM05D002733 ORTHO05D003856 3.8e-15 85.9 108 38.9
MD02G1060300 Malus domestica HOM05D002733 ORTHO05D003856 8.5e-15 84.7 102 42.2
Phvul.005G028900 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 1.1e-14 84.3 144 29.9
THA.LOC104810048 Tarenaya hassleriana HOM05D002733 ORTHO05D003856 1.1e-14 84.3 198 31.3
Aa31LG8G11380 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.5e-14 83.2 188 36.2
Aa31LG8G17190 Aethionema arabicum HOM05D002733 ORTHO05D003856 7.2e-14 81.6 108 35.2
AT4G03160 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 7.2e-14 81.6 105 41.0
Sp4g22040 Schrenkiella parvula HOM05D010480 ORTHO05D003856 7.2e-14 81.6 129 38.0
PGSC0003DMG400000371 Solanum tuberosum HOM05D002733 ORTHO05D003856 9.4e-14 81.3 128 35.2
Aa31LG7G1600 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.1e-13 80.1 155 33.5
AT1G20600 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 2.1e-13 80.1 92 43.5
BcaC01g05470 Brassica carinata HOM05D002733 ORTHO05D003856 8.0e-13 78.2 108 39.8
Aa31LG8G17150 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.4e-12 77.4 144 31.9
PSO782G1409 Papaver somniferum HOM05D002733 ORTHO05D003856 3.0e-12 76.3 106 38.7
Aqoxy2G03580 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 5.2e-12 75.5 114 38.6
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 6.7e-12 75.1 125 32.8
Dinv26718 Davidia involucrata HOM05D002733 ORTHO05D003856 2.0e-11 73.6 91 49.5
Nitab4.5_0005564g0030 Nicotiana tabacum HOM05D002733 ORTHO05D003856 5.7e-11 72.0 109 37.6
Aa31LG7G1510 Aethionema arabicum HOM05D002733 ORTHO05D003856 9.7e-11 71.2 128 32.8
Thhalv10017517m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 1.3e-10 70.9 121 32.2
A05p06650 Brassica napus HOM05D010480 ORTHO05D003856 1.7e-10 70.5 151 33.1
BolC3t19780H Brassica oleracea HOM05D010480 ORTHO05D003856 1.7e-10 70.5 151 32.5
BraA05t19631Z Brassica rapa HOM05D010480 ORTHO05D003856 1.7e-10 70.5 151 33.1
COL.COLO4_00094 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.7e-10 70.5 77 48.1
A05p06630 Brassica napus HOM05D010480 ORTHO05D003856 2.8e-10 69.7 126 37.3
BraA05t19630Z Brassica rapa HOM05D010480 ORTHO05D003856 2.8e-10 69.7 126 37.3
Prupe.7G162100 Prunus persica HOM05D002733 ORTHO05D003856 2.8e-10 69.7 80 48.8
C04p07760 Brassica napus HOM05D010480 ORTHO05D003856 4.8e-10 68.9 141 33.3
BolC4t22393H Brassica oleracea HOM05D010480 ORTHO05D003856 4.8e-10 68.9 141 33.3
BcaB02g09089 Brassica carinata HOM05D010480 ORTHO05D003856 6.3e-10 68.6 170 30.6
Thhalv10003384m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 1.1e-09 67.8 117 31.6
BcaC02g12110 Brassica carinata HOM05D010480 ORTHO05D003856 1.8e-09 67.0 127 37.0
C04p07770 Brassica napus HOM05D010480 ORTHO05D003856 1.8e-09 67.0 164 31.1
BcaC02g12108 Brassica carinata HOM05D010480 ORTHO05D003856 2.4e-09 66.6 133 36.8
BcaC02g12109 Brassica carinata HOM05D010480 ORTHO05D003856 2.4e-09 66.6 162 31.5
C04p07780 Brassica napus HOM05D010480 ORTHO05D003856 2.4e-09 66.6 133 36.8
BolC4t22394H Brassica oleracea HOM05D010480 ORTHO05D003856 2.4e-09 66.6 162 31.5
BraA05t19632Z Brassica rapa HOM05D010480 ORTHO05D003856 2.4e-09 66.6 159 33.3
Phvul.004G169400 Phaseolus vulgaris HOM05D022012 ORTHO05D003856 5.3e-09 65.5 111 36.0
A05p06660 Brassica napus HOM05D010480 ORTHO05D003856 7.0e-09 65.1 159 33.3
BolC4t22395H Brassica oleracea HOM05D010480 ORTHO05D003856 9.1e-09 64.7 134 35.8
ATR1159G057 Amborella trichopoda HOM05D020218 ORTHO05D013427 1.2e-08 64.3 158 29.1
VMungo0464G0934 Vigna mungo HOM05D022012 ORTHO05D003856 5.9e-08 62.0 111 34.2
Aa31LG7G1580 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.8e-07 59.3 71 43.7
Phvul.004G169500 Phaseolus vulgaris HOM05D022012 ORTHO05D003856 1.9e-06 57.0 113 31.9
CARHR135110 Cardamine hirsuta HOM05D002733 ORTHO05D003856 9.4e-06 54.7 132 31.1


User provided reference genes

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